CX047169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX047169 vs. ExPASy Swiss-Prot
Match: TIF3B_ARATH (Protein TIFY 3B OS=Arabidopsis thaliana GN=TIFY3B PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.911e-31 Identity = 78/166 (46.99%), Postives = 105/166 (63.25%), Query Frame = 2 Query: 149 VAQNDAGSAAGLDLSGNEVFNNTIRATAIPTSGVNATDLAPTQLTIFYGGKVCVFDAIPADKVREIMLIAASSATVTNTSDMKKDDTNCPASSPVLTRSPSLQSTASALASPRAQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRLVSKNPYPVQSEAKASD 646 VA D G+A E N +R+T I T+ + P QLTIF+GG V VFD +P++KV+EI+ IAA + N++ + P SSP L R+PS ST++ +ASP AQ +P+Q C+ A+LP+ARRHSLQRF EKRRDRLV+KNPYP S+ K +D Sbjct: 18 VADGDGGAAEIGGTGSVEKSINEVRSTEIQTA---EPTVPPNQLTIFFGGSVTVFDGLPSEKVQEILRIAAKAMETKNSTSIS------PVSSPALNRAPSFSSTSN-VASPAAQPFPIQPISFCRSTADLPIARRHSLQRFLEKRRDRLVNKNPYPT-SDFKKTD 172
BLAST of CX047169 vs. ExPASy Swiss-Prot
Match: TIF3A_ARATH (Protein TIFY 3A OS=Arabidopsis thaliana GN=TIFY3A PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.547e-14 Identity = 56/130 (43.08%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 263 LAPTQLTIFYGGKVCVFDAIPADKVREIMLIAASSATVTNTSDMKKDDTNCPASSPVLTRSPSLQSTASALASPRAQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRLVSKNPY-PVQSEAKASDT 649 + P+QLTI +GG VFD IPA+KV+EI+ IAA+ A T T N + +P L R+ S S AS +A C A++P+ARR SLQRFFEKRR R V PY SEA ++T Sbjct: 127 ILPSQLTIIFGGSFSVFDGIPAEKVQEILHIAAA-AKATET-------INLTSINPALKRAISF-SNASTVA--------------CVSTADVPIARRRSLQRFFEKRRHRFVHTKPYSATTSEADKNET 233
BLAST of CX047169 vs. ExPASy Swiss-Prot
Match: TI10B_ARATH (Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14 Identity = 52/132 (39.39%), Postives = 73/132 (55.30%), Query Frame = 2 Query: 278 LTIFYGGKVCVFDAIPADKVREIMLIAASSATVTNTSDMKKDDTNCPASSPVLTRSPSLQSTASALASPR--AQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRLVSKNPYPVQSEAKASDTKAQTPA 667 LTIFYGG+V VFD A+K +E++ +A + + T + + N A S + S+ + + SP A P+Q N L ELP+ARR SL RF EKR+DR+ SK PY + A+AS +K PA Sbjct: 120 LTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAYS-----QKEIASSPNPVCSPAKTAAQEPIQPNP-ASLACELPIARRASLHRFLEKRKDRITSKAPYQIDGSAEAS-SKPTNPA 244
BLAST of CX047169 vs. ExPASy Swiss-Prot
Match: TI11A_ARATH (Protein TIFY 11A OS=Arabidopsis thaliana GN=TIFY11A PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.183e-11 Identity = 47/123 (38.21%), Postives = 64/123 (52.03%), Query Frame = 2 Query: 272 TQLTIFYGGKVCVFDAIPADKVREIMLIAASSATVT--NTSDMKKDDTNCPASSPVLTRSPSLQSTASALASPRAQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRLVSKNPYPVQSEA 634 +QLTIF+GGKV V++ P DK +EIM +A + VT N D+ N SS VL P L + Q ++N + + +ARR SL RFF KR+DR V++ PY V A Sbjct: 97 SQLTIFFGGKVLVYNEFPVDKAKEIMEVAKQAKPVTEINIQTPINDENNNNKSSMVL---PDLNEPTDNNHLTKEQQQQQEQNQIVE-----RIARRASLHRFFAKRKDRAVARAPYQVNQNA 211 The following BLAST results are available for this feature:
BLAST of CX047169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047169 ID=CX047169; Name=CX047169; organism=Citrus sinensis; type=EST; length=920bpback to top |