CX047152
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047152 vs. ExPASy Swiss-Prot
Match: DCHS_SOLLC (Histidine decarboxylase OS=Solanum lycopersicum GN=HDC PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.547e-50 Identity = 93/160 (58.13%), Postives = 123/160 (76.88%), Query Frame = 1 Query: 358 VLARYRKTLMERTKHHLGYPYNLDFDYGA-LAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAGFKAKLLQNKDKPAIINVN 831 +L +Y +TL ER K+H+GYP N+ +++ A LA L F +NN GDPF + HS+ FEV VLDWFA+LWE+E +EYWGYIT+ GTEGNLHG +G RE+ P+G LYAS++SHYS+FKAARMYRME ++ L++GEID ++KLL NK+KPAIIN+N Sbjct: 17 ILTQYLETLSERKKYHIGYPINMCYEHHATLAPLLQFHLNNCGDPFTQHPTDFHSKDFEVAVLDWFAQLWEIEKDEYWGYITSGGTEGNLHGFWLGRRELLPNGYLYASKDSHYSIFKAARMYRMELQTINTLVNGEIDYEDLQSKLLVNKNKPAIININ 176
BLAST of CX047152 vs. ExPASy Swiss-Prot
Match: DCHS_PSEE4 (Histidine decarboxylase OS=Pseudomonas entomophila (strain L48) GN=hdc PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.207e-29 Identity = 63/143 (44.06%), Postives = 91/143 (63.64%), Query Frame = 1 Query: 403 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAGFKAKLLQNKDKPAIINVN 831 ++GYP N DF+Y L + FSINN GD NY ++S FE V+ +FA L+ + E WGY+TN GTEGN+ G + RE+FP G LY S+++HYSV K ++ R++C V+ L +GEID AK+ ++++ II VN Sbjct: 25 NIGYPENADFNYAQLHRFLRFSINNCGDWAEPGNYLLNSFDFEKDVMAYFAELFSIPLEESWGYVTNGGTEGNMFGCYLARELFPTGTLYYSKDTHYSVAKIVKLLRIDCRAVESLPNGEIDYDDLMAKIAADQEQHPIIFVN 167
BLAST of CX047152 vs. ExPASy Swiss-Prot
Match: DCHS_PSEFL (Histidine decarboxylase OS=Pseudomonas fluorescens GN=hdc PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.051e-28 Identity = 64/144 (44.44%), Postives = 93/144 (64.58%), Query Frame = 1 Query: 403 HLGYPYNLDFDYGALAQLQHFSINNL-GDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAGFKAKLLQNKDKPAIINVN 831 ++GYP + DFDY L + FSINNL G SNY ++S FE V+ +FA L+ + + WGY+TN GTEGN+ G +GRE+FPDG LY S+++HYSV K ++ R++C V+ L +GEID AK+ ++++ II N Sbjct: 25 NIGYPESADFDYSQLHRFLQFSINNLLGTGNEYSNYLLNSFDFEKDVMTYFAELFNIALEDSWGYVTNGGTEGNMFGCYLGRELFPDGTLYYSKDTHYSVAKIVKLLRIKCRAVESLPNGEIDYDDLMAKITADQERHPIIFAN 168
BLAST of CX047152 vs. ExPASy Swiss-Prot
Match: DCHS_ACIBT (Histidine decarboxylase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=hdc PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 2.051e-28 Identity = 63/143 (44.06%), Postives = 91/143 (63.64%), Query Frame = 1 Query: 403 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAGFKAKLLQNKDKPAIINVN 831 ++GYP + DFDY AL + FSINN GD SNY ++S FE V+ +FA ++++ E WGY+TN GTEGN+ G + RE+FPD LY S+++HYSV K A++ +M+ ++ L +GEID K+ NK+ II N Sbjct: 25 NIGYPESADFDYSALFRFFKFSINNCGDWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNMFGCYLARELFPDSTLYYSKDTHYSVGKIAKLLQMKSCVIESLDNGEIDYDDLIHKIKTNKESHPIIFAN 167
BLAST of CX047152 vs. ExPASy Swiss-Prot
Match: DCHS_ACIBC (Histidine decarboxylase OS=Acinetobacter baumannii (strain ACICU) GN=hdc PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.051e-28 Identity = 63/143 (44.06%), Postives = 91/143 (63.64%), Query Frame = 1 Query: 403 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAGFKAKLLQNKDKPAIINVN 831 ++GYP + DFDY AL + FSINN GD SNY ++S FE V+ +FA ++++ E WGY+TN GTEGN+ G + RE+FPD LY S+++HYSV K A++ +M+ ++ L +GEID K+ NK+ II N Sbjct: 25 NIGYPESADFDYSALFRFFKFSINNCGDWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNMFGCYLARELFPDSTLYYSKDTHYSVRKIAKLLQMKSCVIESLDNGEIDYDDLIHKIKTNKESHPIIFAN 167
BLAST of CX047152 vs. ExPASy Swiss-Prot
Match: DCHS_RHILO (Histidine decarboxylase OS=Rhizobium loti GN=hdc PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.569e-28 Identity = 61/151 (40.40%), Postives = 92/151 (60.93%), Query Frame = 1 Query: 379 TLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAGFKAKLLQNKDKPAIINVN 831 ++ E LGYP+ DFDY L + + NNLGDPF Y V+S FE V+D+FARL+ + E WGY+TN GTEGN++G+ + RE++P+ + Y S+++HYSV K R+ R+E V +GEI+ K + + +PA++ N Sbjct: 16 SMQEANGCFLGYPFAKDFDYEPLWRFMSLTGNNLGDPFEPGTYRVNSHAFECDVVDFFARLFRACSCEVWGYVTNGGTEGNIYGLYLARELYPNAVAYFSQDTHYSVSKGVRLLRLEHSVVRSQSNGEINYDDLAQKATRYRTRPAVVVAN 166
BLAST of CX047152 vs. ExPASy Swiss-Prot
Match: DCHS_KLEPL (Histidine decarboxylase OS=Klebsiella planticola GN=hdc PE=3 SV=4) HSP 1 Score: 125.176 bits (313), Expect = 4.569e-28 Identity = 61/143 (42.66%), Postives = 93/143 (65.03%), Query Frame = 1 Query: 403 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAGFKAKLLQNKDKPAIINVN 831 ++GYP + DFDY L + FSINN GD NY ++S FE V+++FA+L+++ E WGY+TN GTEGN+ G +GRE+FP+G LY S+++HYSV K ++ R++ V+ +GE+D A K+ ++ +K II N Sbjct: 25 NIGYPESADFDYTILERFMRFSINNCGDWGEYCNYLLNSFDFEKEVMEYFAQLFKIPFEESWGYVTNGGTEGNMFGCYLGREIFPNGTLYYSKDTHYSVAKIVKLLRIKSTLVESQPNGEMDYADLIKKIKRDNEKHPIIFAN 167
BLAST of CX047152 vs. ExPASy Swiss-Prot
Match: DCHS_ACIBY (Histidine decarboxylase OS=Acinetobacter baumannii (strain AYE) GN=hdc PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27 Identity = 62/143 (43.36%), Postives = 90/143 (62.94%), Query Frame = 1 Query: 403 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAGFKAKLLQNKDKPAIINVN 831 ++GYP + DFDY AL + FSINN GD SNY ++S FE V+ +FA ++++ E WGY+TN GTEGN+ G + RE+F D LY S+++HYSV K A++ +M+ ++ L +GEID K+ NK+ II N Sbjct: 25 NIGYPESADFDYSALFRFFKFSINNCGDWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNMFGCYLARELFSDSTLYYSKDTHYSVGKIAKLLQMKSCVIESLDNGEIDYDDLIHKIKTNKESHPIIFAN 167
BLAST of CX047152 vs. ExPASy Swiss-Prot
Match: DCHS_ACIB5 (Histidine decarboxylase OS=Acinetobacter baumannii (strain AB0057) GN=hdc PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27 Identity = 62/143 (43.36%), Postives = 90/143 (62.94%), Query Frame = 1 Query: 403 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAGFKAKLLQNKDKPAIINVN 831 ++GYP + DFDY AL + FSINN GD SNY ++S FE V+ +FA ++++ E WGY+TN GTEGN+ G + RE+F D LY S+++HYSV K A++ +M+ ++ L +GEID K+ NK+ II N Sbjct: 25 NIGYPESADFDYSALFRFFKFSINNCGDWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNMFGCYLARELFSDSTLYYSKDTHYSVGKIAKLLQMKSCVIESLDNGEIDYDDLIHKIKTNKESHPIIFAN 167
BLAST of CX047152 vs. ExPASy Swiss-Prot
Match: DCHS_ACIB3 (Histidine decarboxylase OS=Acinetobacter baumannii (strain AB307-0294) GN=hdc PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27 Identity = 62/143 (43.36%), Postives = 90/143 (62.94%), Query Frame = 1 Query: 403 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAGFKAKLLQNKDKPAIINVN 831 ++GYP + DFDY AL + FSINN GD SNY ++S FE V+ +FA ++++ E WGY+TN GTEGN+ G + RE+F D LY S+++HYSV K A++ +M+ ++ L +GEID K+ NK+ II N Sbjct: 25 NIGYPESADFDYSALFRFFKFSINNCGDWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNMFGCYLARELFSDSTLYYSKDTHYSVGKIAKLLQMKSCVIESLDNGEIDYDDLIHKIKTNKESHPIIFAN 167 The following BLAST results are available for this feature:
BLAST of CX047152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047152 ID=CX047152; Name=CX047152; organism=Citrus sinensis; type=EST; length=833bpback to top |