CX047147
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX047147 vs. ExPASy Swiss-Prot
Match: PSMD4_ARATH (26S proteasome non-ATPase regulatory subunit 4 OS=Arabidopsis thaliana GN=MBP1 PE=1 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 7.853e-89 Identity = 158/194 (81.44%), Postives = 177/194 (91.24%), Query Frame = 2 Query: 128 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGE-DDEGNTEKLEALLAAVNNNDSSHLVHVPPGPNALSDVLLSTPIFTGD 706 MVLEAT+ICIDNSEWMRNGDY+PSR QAQTEA NL+CGAKTQ NPENTVG++TMAGKGVRVL TPTSDLGKILACMHGL++GGE+NL A IQ+AQLALKHRQNK Q+QRIIVF GSPIK+EKK LE++G++LKKNSV+LDIVNFGE DDE +KLEALL AVNNND SH+VHVP G NALSDVLLSTP+FTGD Sbjct: 1 MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVRVLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKYEKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANALSDVLLSTPVFTGD 194
BLAST of CX047147 vs. ExPASy Swiss-Prot
Match: PSMD4_DICDI (26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum GN=psmD4 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.218e-58 Identity = 109/189 (57.67%), Postives = 144/189 (76.19%), Query Frame = 2 Query: 128 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNNDSSHLVHVPPGPNALSDVLLSTPI 694 M LEAT++C+DNSEWMRNGD+ PSR +AQ +A NLIC +KTQ NPE+ V +M+MAGK VLVT T +L KIL+ L+I G+++ + +Q+AQLAL+HRQN Q RII FVGSP+K K+ L + ++LKKN VA+DI+NFGE E N++KLEA + VNNND SHL+ VPPGP+ LSD++L +PI Sbjct: 1 MTLEATIVCLDNSEWMRNGDFTPSRSEAQKDAVNLICASKTQSNPESAVSIMSMAGKKPEVLVTLTQELSKILSGAQELKINGKIDFSTTMQIAQLALRHRQNNHQHPRIIAFVGSPLKETKEELIQLAKRLKKNGVAVDIINFGEVTE-NSDKLEAFINDVNNNDESHLLTVPPGPHILSDIILQSPI 188
BLAST of CX047147 vs. ExPASy Swiss-Prot
Match: PSMD4_MOUSE (26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus GN=Psmd4 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.385e-50 Identity = 100/195 (51.28%), Postives = 140/195 (71.79%), Query Frame = 2 Query: 128 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGD 706 MVLE+T++C+DNSE+MRNGD+ P+R QAQ +A N++C +KT+ NPEN VG++T+A VL T T D G+IL+ +H ++ G++ GI+VA LALKHRQ K + RII FVGSP++ +K L + ++LKK V +DI+NFGE +E NTEKL A + +N D SHLV VPPGP +L+D L+S+PI G+ Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLAND-CEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADALISSPILAGE 192
BLAST of CX047147 vs. ExPASy Swiss-Prot
Match: PSMD4_HUMAN (26S proteasome non-ATPase regulatory subunit 4 OS=Homo sapiens GN=PSMD4 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.385e-50 Identity = 100/195 (51.28%), Postives = 140/195 (71.79%), Query Frame = 2 Query: 128 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGD 706 MVLE+T++C+DNSE+MRNGD+ P+R QAQ +A N++C +KT+ NPEN VG++T+A VL T T D G+IL+ +H ++ G++ GI+VA LALKHRQ K + RII FVGSP++ +K L + ++LKK V +DI+NFGE +E NTEKL A + +N D SHLV VPPGP +L+D L+S+PI G+ Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLAND-CEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADALISSPILAGE 192
BLAST of CX047147 vs. ExPASy Swiss-Prot
Match: PSMD4_BOVIN (26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus GN=PSMD4 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.385e-50 Identity = 100/195 (51.28%), Postives = 140/195 (71.79%), Query Frame = 2 Query: 128 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGD 706 MVLE+T++C+DNSE+MRNGD+ P+R QAQ +A N++C +KT+ NPEN VG++T+A VL T T D G+IL+ +H ++ G++ GI+VA LALKHRQ K + RII FVGSP++ +K L + ++LKK V +DI+NFGE +E NTEKL A + +N D SHLV VPPGP +L+D L+S+PI G+ Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLAND-CEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADALISSPILAGE 192
BLAST of CX047147 vs. ExPASy Swiss-Prot
Match: RPN10_SCHPO (26S proteasome regulatory subunit rpn10 OS=Schizosaccharomyces pombe GN=rpn10 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.498e-47 Identity = 96/192 (50.00%), Postives = 129/192 (67.19%), Query Frame = 2 Query: 128 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNNDSSHLVHVPPGPNALSDVLLSTPIFTG 703 MVLEAT+I IDNSEWM NGDY P+RF+AQ + ++I K NPEN G+MT+ +VL T T D GK L+ MH L + G GIQ+AQLALKHR+NK Q+QRI+ FVGSPI ++K L + +++KKN+VA+DI++ GE N L+ + A N++DS HLV +PP P LSD++ +PI G Sbjct: 1 MVLEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQVLSTLTRDYGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQ--NESALQHFIDAANSSDSCHLVSIPPSPQLLSDLVNQSPIGQG 190
BLAST of CX047147 vs. ExPASy Swiss-Prot
Match: RPN10_YEAST (26S proteasome regulatory subunit RPN10 OS=Saccharomyces cerevisiae GN=RPN10 PE=1 SV=3) HSP 1 Score: 187.193 bits (474), Expect = 7.436e-47 Identity = 99/191 (51.83%), Postives = 136/191 (71.20%), Query Frame = 2 Query: 128 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNN--NDSSHLVHVPPGPNALSDVLLSTPI 694 MVLEAT++ IDNSE+ RNGD+ +RF+AQ ++ I AK NPENTVG+++ AG RVL T T++ GKILA +H +I G+L++A +Q+AQL LKHRQNK Q QRI+ FV SPI + L + + LKKN+VA+DI+NFGE ++ NTE L+ +AAVNN ++SHL+ V PGP L + + S+PI Sbjct: 1 MVLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVLSTFTAEFGKILAGLHDTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIEQ-NTELLDEFIAAVNNPQEETSHLLTVTPGPRLLYENIASSPI 190
BLAST of CX047147 vs. ExPASy Swiss-Prot
Match: PSMD4_DROME (26S proteasome non-ATPase regulatory subunit 4 OS=Drosophila melanogaster GN=Pros54 PE=1 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 4.080e-45 Identity = 100/195 (51.28%), Postives = 130/195 (66.67%), Query Frame = 2 Query: 128 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGD 706 MVLE+T+IC DNS++ RNGDY P+R Q + NL+C K + NPEN VG+MT++ V VL T TSD G+I + MH ++ GE+NL GI++A L LKHRQ K + RI+VFVGSPI HE+ L ++LKK V +DIV+FG D N E L A + A+N D SHLV VP G + LSD LLS+PI G+ Sbjct: 1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNT-VEVLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIVSFG-DHGNNNEILTAFINALNGKDGTGSHLVSVPRG-SVLSDALLSSPIIQGE 192
BLAST of CX047147 vs. ExPASy Swiss-Prot
Match: PIPSL_HUMAN (Putative PIP5K1A and PSMD4-like protein OS=Homo sapiens GN=PIPSL PE=5 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 91/193 (47.15%), Postives = 126/193 (65.28%), Query Frame = 2 Query: 134 LEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGD 706 L+ +DNSE+M NGD+ P+R QAQ +A N +C +KT+ NPEN VG++T+ VL T T D G+IL+ +H ++ G++ GI VA LALKHRQ + RII FVG+P++ +K L + + LKK V +DI+NFGE +E NTEKL A + +N D SHLV VPPGP +L+D L+S PI G+ Sbjct: 488 LQMLTTSVDNSEYMGNGDFLPTRLQAQQDAVNTVCHSKTRSNPENNVGLITL-DNDCEVLTTLTPDTGRILSKLHTVQPKGKITFCMGIHVAHLALKHRQGNNHKIRIIAFVGNPVEDNEKNLVKLAKCLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADALISFPILAGE 677
BLAST of CX047147 vs. ExPASy Swiss-Prot
Match: PSMD4_SCHMA (26S proteasome non-ATPase regulatory subunit 4 OS=Schistosoma mansoni PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.774e-40 Identity = 86/195 (44.10%), Postives = 129/195 (66.15%), Query Frame = 2 Query: 128 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGD 706 M EAT+I +DNS++MRNGD+ P+R QAQ +A LIC +K Q NPENT+G++++A VL T T+D+ KI +H +E G + + I++A LAL+HRQ + Q+ RI+ F+GSPI ++K L + ++LKK V +DI+NFGE +E N +KL + +N D SHL+ V PG L D L+++P+ G+ Sbjct: 1 MSQEATIIAVDNSDYMRNGDFFPTRLQAQNDAVGLICQSKRQRNPENTIGLLSLAN--TEVLCTLTNDVSKIYNRLHLVEPKGRIIFCSSIRIAHLALRHRQLRHQKMRIVCFIGSPILEDEKELTRLAKRLKKEKVNVDIINFGE-NETNEQKLSEFIDTLNGKDGTGSHLISVAPG-TVLHDTLMTSPVVAGE 191 The following BLAST results are available for this feature:
BLAST of CX047147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047147 ID=CX047147; Name=CX047147; organism=Citrus sinensis; type=EST; length=707bpback to top |