CX047113

Overview
NameCX047113
Unique NameCX047113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3540 contig Csv1_Contig3540:358..1181. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX047113 vs. ExPASy Swiss-Prot
Match: SY132_ARATH (Syntaxin-132 OS=Arabidopsis thaliana GN=SYP132 PE=1 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 3.593e-102
Identity = 196/271 (72.32%), Postives = 211/271 (77.86%), Query Frame = 3
Query:    3 ENFFKKVQDIDXXXXXXXXXXXXXQGAHEESKSVTKAPAMKAIKKRMEKDVDEVGKISRFIKSKIEELDRENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXXGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMCXXXXXXXXXXXXXXXXXXKPWSSNKGA 815
            E+FFKKVQ ID             Q +HEESKSVTKAPAMKAIKK MEKDVDEVG I+RFIK K+EELDRENL +RQKPGC KG+GVDRSRTATTL LKKK KDKM EFQVLRENI Q              G+RADE+TID+LIETG+SEQIFQKAIQEQGRGQ+MDTLAEIQERHDAVRDLE+KLL+LQQIFLDMAVLVDAQG+MLDNIESQVSSAVDHVQSGNTALQ+AK LQKNSRKWMC                  KPW  NK A
Sbjct:   35 EDFFKKVQVIDKQYDKLDKLLKKLQASHEESKSVTKAPAMKAIKKTMEKDVDEVGSIARFIKGKLEELDRENLANRQKPGCAKGSGVDRSRTATTLSLKKKLKDKMAEFQVLRENIQQEYRDVVDRRVYTVTGERADEDTIDELIETGNSEQIFQKAIQEQGRGQVMDTLAEIQERHDAVRDLEKKLLDLQQIFLDMAVLVDAQGEMLDNIESQVSSAVDHVQSGNTALQRAKSLQKNSRKWMCIAIIILLIVVAVIVVGVLKPW-KNKSA 304          
BLAST of CX047113 vs. ExPASy Swiss-Prot
Match: SY131_ARATH (Putative syntaxin-131 OS=Arabidopsis thaliana GN=SYP131 PE=2 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 7.012e-98
Identity = 183/269 (68.03%), Postives = 207/269 (76.95%), Query Frame = 3
Query:    9 FFKKVQDIDXXXXXXXXXXXXXQGAHEESKSVTKAPAMKAIKKRMEKDVDEVGKISRFIKSKIEELDRENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXXGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMCXXXXXXXXXXXXXXXXXXKPWSSNKGA 815
            FFKKVQ+I+             QGAHEE+K+VTKAPAMK+IK+RME+DVDEVG+ISRFIK KIEELDRENL +R KPGCGKGTGVDR+RTATT+ +KKKFKDK+ EFQ LR+NI Q              G+RADEE ID+LIETGDSEQIFQKAI+EQGRGQIMDTLAEIQERHDAVRDLE+KLL+LQQ+FLDMAVLVDAQG+MLDNIE+ VSSAVDHVQSGN  L KA K QK+SRKWMC                  KPW+   GA
Sbjct:   38 FFKKVQEIEKQYEKLDKHLNKLQGAHEETKAVTKAPAMKSIKQRMERDVDEVGRISRFIKGKIEELDRENLENRTKPGCGKGTGVDRTRTATTIAVKKKFKDKISEFQTLRQNIQQEYREVVERRVFTVTGQRADEEAIDRLIETGDSEQIFQKAIREQGRGQIMDTLAEIQERHDAVRDLEKKLLDLQQVFLDMAVLVDAQGEMLDNIENMVSSAVDHVQSGNNQLTKAVKSQKSSRKWMCIAILILLIIIIITVISVLKPWTQKNGA 306          
BLAST of CX047113 vs. ExPASy Swiss-Prot
Match: SY123_ARATH (Syntaxin-123 OS=Arabidopsis thaliana GN=SYP123 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.282e-56
Identity = 114/244 (46.72%), Postives = 155/244 (63.52%), Query Frame = 3
Query:    3 ENFFKKVQDIDXXXXXXXXXXXXXQGAHEESKSVTKAPAMKAIKKRMEKDVDEVGKISRFIKSKIEELDRENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXXGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 734
            + FF  V+ +              Q A+EESK+V  + A+K ++ RM+  V EV K  + IK+K+  L++ N   R+  GCG G+  DR+RT+   GL KK KD M +FQ LR  +                G++ADEET+++LI +G+SE+  QKAIQEQGRGQ+MDTL+EIQERHD V+++ER LLEL Q+FLDMA LV+AQG+ML++IES VS A   V  G   L  AK LQ+N+RKW C
Sbjct:   37 DEFFGYVESVKEDMKAVDEIHKRLQDANEESKTVHDSKAVKKLRARMDSSVTEVLKRVKMIKTKLVALEKSNAAQRKVAGCGPGSSADRTRTSVVSGLGKKLKDMMDDFQRLRTKMATEYKETVERRYFTVTGQKADEETVEKLISSGESERFLQKAIQEQGRGQVMDTLSEIQERHDTVKEIERSLLELHQVFLDMAALVEAQGNMLNDIESNVSKASSFVMRGTDQLHGAKVLQRNNRKWAC 280          
BLAST of CX047113 vs. ExPASy Swiss-Prot
Match: SY125_ARATH (Syntaxin-125 OS=Arabidopsis thaliana GN=SYP125 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.084e-56
Identity = 112/244 (45.90%), Postives = 155/244 (63.52%), Query Frame = 3
Query:    3 ENFFKKVQDIDXXXXXXXXXXXXXQGAHEESKSVTKAPAMKAIKKRMEKDVDEVGKISRFIKSKIEELDRENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXXGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 734
            + FF+ V+++              Q ++EE K+V  A  +K ++ +M+ DV  V K  + IK K+E L++ N  SR  PGCG G+  DR+R++   GL KK KD M  FQ LR  ++               G++ADE+TID LI +G+SE   QKAIQEQGRGQI+DT++EIQERHDAV+++E+ LLEL Q+FLDMA LV+AQG  L+NIES V+ A   V+ G   LQ A++ QK+SRKW C
Sbjct:   29 DKFFEDVENVKDDMKGVEALYKKLQDSNEECKTVHNAKKVKELRAKMDGDVAMVLKRVKIIKQKLEALEKANANSRNVPGCGPGSSTDRTRSSVVSGLGKKLKDLMDSFQGLRARMNNEYKETVERRYFTITGEKADEQTIDNLIASGESENFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIESHVAKASSFVRRGTDQLQDAREYQKSSRKWTC 272          
BLAST of CX047113 vs. ExPASy Swiss-Prot
Match: SY121_ARATH (Syntaxin-121 OS=Arabidopsis thaliana GN=SYP121 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.640e-56
Identity = 113/270 (41.85%), Postives = 155/270 (57.41%), Query Frame = 3
Query:    3 ENFFKKVQDIDXXXXXXXXXXXXXQGAHEESKSVTKAPAMKAIKKRMEKDVDEVGKISRFIKSKIEELDRENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXXGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMCXXXXXXXXXXXXXXXXXXKPWSSNKG 812
            + FF+ V+ +                 HE+SK++  A A+K ++ +M+ DV    K ++ IK K+E LDR N  +R  PGCG G+  DR+RT+   GL+KK  D M  F  LRE I                G+  DE T+D+LI TG+SE+  QKAIQEQGRG+++DT+ EIQERHDAV+D+E+ L EL Q+FLDMAVLV+ QG  LD+IES V  A   ++ G   LQ A+  QKN+RKW C                  KPW+++ G
Sbjct:   45 DKFFEDVESVKEELKELDRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKKAKMIKVKLEALDRANAANRSLPGCGPGSSSDRTRTSVLNGLRKKLMDSMDSFNRLRELISSEYRETVQRRYFTVTGENPDERTLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHDAVKDIEKNLRELHQVFLDMAVLVEHQGAQLDDIESHVGRASSFIRGGTDQLQTARVYQKNTRKWTCIAIIILIIIITVVVLAVLKPWNNSSG 314          
BLAST of CX047113 vs. ExPASy Swiss-Prot
Match: SY124_ARATH (Syntaxin-124 OS=Arabidopsis thaliana GN=SYP124 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.252e-54
Identity = 109/244 (44.67%), Postives = 155/244 (63.52%), Query Frame = 3
Query:    3 ENFFKKVQDIDXXXXXXXXXXXXXQGAHEESKSVTKAPAMKAIKKRMEKDVDEVGKISRFIKSKIEELDRENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXXGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 734
            + FF+ V+++              Q ++EE K+V  A  +K ++ +M+ DV +V K  + IK K+E L++ N  SR   GCG G+  DR+RT+   GL KK KD M  FQ LR  ++               G++ADE+TI+ LI +G+SE   QKAIQEQGRGQI+DT++EIQERHDAV+++E+ L+EL Q+FLDMA LV++QG  L++IES VS A   V+ G   LQ A++ QK+SRKW C
Sbjct:   34 DKFFEDVENVKDNMKGVETLYKSLQDSNEECKTVHNAKKVKELRAKMDGDVAQVLKRVKMIKQKLEALEKANANSRNVSGCGPGSSTDRTRTSVVSGLGKKLKDLMDSFQGLRARMNAEYKETVERRYFTITGEQADEQTIENLISSGESENFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLIELHQVFLDMAALVESQGQQLNDIESHVSKASSFVRRGTDQLQDAREYQKSSRKWTC 277          
BLAST of CX047113 vs. ExPASy Swiss-Prot
Match: SY122_ARATH (Syntaxin-122 OS=Arabidopsis thaliana GN=SYP122 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.871e-53
Identity = 114/270 (42.22%), Postives = 155/270 (57.41%), Query Frame = 3
Query:    3 ENFFKKVQDIDXXXXXXXXXXXXXQGAHEESKSVTKAPAMKAIKKRMEKDVDEVGKISRFIKSKIEELDRENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXXGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMCXXXXXXXXXXXXXXXXXXKPWSSNKG 812
            + FF  V+ ++             + ++E+SK++  A A+K +KK+M+ DV    K +R +K  +E LDR N  +R  P  G G+  DR RT+   GL+KK KD+M +F  +RE I                G+  DE T+++LI TG+SE   QKAIQEQGRG+I+DT+ EIQERHDAV+D+E+ L EL Q+FLDMAVLV+ QG  LD+IE  V  A   V+SG   L KA+  QKN+RKW C                  KPW SN G
Sbjct:   44 DTFFLDVEVVNEDLKELDRLCHNLRSSNEQSKTLHNANAVKELKKKMDADVTAALKTARRLKGNLEALDRANEVNRSLPESGPGSSSDRQRTSVVNGLRKKLKDEMEKFSRVRETITNEYKETVGRMCFTVTGEYPDEATLERLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKDIEKSLNELHQVFLDMAVLVEHQGAQLDDIEGNVKRANSLVRSGADRLVKARFYQKNTRKWTCFAILLLLIIVVLIVVFTVKPWESNGG 313          
BLAST of CX047113 vs. ExPASy Swiss-Prot
Match: SY111_ARATH (Syntaxin-related protein KNOLLE OS=Arabidopsis thaliana GN=KN PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.127e-42
Identity = 89/218 (40.83%), Postives = 141/218 (64.68%), Query Frame = 3
Query:   84 HEESKSVTKAPAMKAIKKRMEKDVDEVGKISRFIKSKIEELDRENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXXGKRADEETIDQLI-ETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 734
            HEESK V KA ++K+++ ++  ++    + ++ IKSK+EE+D+ N   ++      GT V RSRTA T GL+KK K+ M EFQ LR+ +                G+ A++E I+++I +    E+   +AIQE G+G++++T+ EIQ+R+DA +++E+ LLEL Q+FLDMAV+V++QG+ +D IE  V +A  +V  G   L+ AK  Q+NSRKWMC
Sbjct:   73 HEESKGVHKAESVKSLRNKISNEIVSGLRKAKSIKSKLEEMDKANKEIKRL----SGTPVYRSRTAVTNGLRKKLKEVMMEFQGLRQKMMSEYKETVERRYFTVTGEHANDEMIEKIITDNAGGEEFLTRAIQEHGKGKVLETVVEIQDRYDAAKEIEKSLLELHQVFLDMAVMVESQGEQMDEIEHHVINASHYVADGANELKTAKSHQRNSRKWMC 286          
BLAST of CX047113 vs. ExPASy Swiss-Prot
Match: SY112_ARATH (Syntaxin-112 OS=Arabidopsis thaliana GN=SYP112 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 9.037e-29
Identity = 72/241 (29.88%), Postives = 127/241 (52.70%), Query Frame = 3
Query:    9 FFKKVQDIDXXXXXXXXXXXXXQGAHEESKSVTKAPAMKAIKKRMEKDVDEVGKISRFIKSKIEELDRENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXXGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWM 731
            FF++++ I              Q  +EE+KS      ++ ++ RME ++  + + +  +K+ IE L++ N+ +R      +G+ VDR+RT+ T G++KK +D M EF  LRE I                G+    E ++++I    S     K  + +    +     + +ERH+AV D++R L  L Q+FLDMAVLV+ QGD +D+IE+ V++A   V  G  +L  A +++K ++ W+
Sbjct:   50 FFQEIETIKTLIEEITHLLLDLQNLNEETKSTHSTKILRGLRDRMESNIVTISRKANTVKTLIETLEKRNVANRTS--FKEGSCVDRTRTSITNGVRKKLRDTMSEFHRLRERIFADYREDLKRKYFLATGEEPSNEDMEKMISGSGSCSDLVKTFEVKPEMDL-----KTKERHEAVNDIKRSLNRLHQVFLDMAVLVETQGDRIDDIEANVANAGSFVSGGTNSLYYANQMKKKTKSWV 283          
BLAST of CX047113 vs. ExPASy Swiss-Prot
Match: STX_APLCA (Syntaxin OS=Aplysia californica PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.935e-17
Identity = 61/242 (25.21%), Postives = 118/242 (48.76%), Query Frame = 3
Query:    3 ENFFKKVQDIDXXXXXXXXXXXXXQGAHEESKSVTKAPAMK-AIKKRMEKDVDEVGKISRFIKSKIEELDRENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXXGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRK 725
            E FF++V +I              +  H    ++  AP     +K+ +E+ + E+ K +  +++K++ +++      Q+    K +   R R      L +KF + M ++   + + ++              GK    E ++ +IE+G+     Q  I E    Q  +TLA+I+ RH+ +  LE  + +L  +F+DMA+LV++QG+M+D IE  V  AVD++++     +KA K Q  +R+
Sbjct:   33 EEFFEQVDEIREMIDKIASNVDEVKKKHS---AILSAPQTDDKMKEELEELMSEIKKNANKVRAKLKVIEQN---IEQEEHTNKSSADLRIRKTQHATLSRKFVEVMNDYNACQID-YRERCKGRIKRQLAITGKTTTNEELEDMIESGNPAIFTQGIIMETQ--QANETLADIEARHNDIMKLETSIRDLHDMFMDMAMLVESQGEMIDRIEYNVEQAVDYIETAKMDTKKAVKYQSKARR 265          
The following BLAST results are available for this feature:
BLAST of CX047113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
SY132_ARATH3.593e-10272.32Syntaxin-132 OS=Arabidopsis thaliana GN=SYP132 PE=... [more]
SY131_ARATH7.012e-9868.03Putative syntaxin-131 OS=Arabidopsis thaliana GN=S... [more]
SY123_ARATH2.282e-5646.72Syntaxin-123 OS=Arabidopsis thaliana GN=SYP123 PE=... [more]
SY125_ARATH5.084e-5645.90Syntaxin-125 OS=Arabidopsis thaliana GN=SYP125 PE=... [more]
SY121_ARATH6.640e-5641.85Syntaxin-121 OS=Arabidopsis thaliana GN=SYP121 PE=... [more]
SY124_ARATH1.252e-5444.67Syntaxin-124 OS=Arabidopsis thaliana GN=SYP124 PE=... [more]
SY122_ARATH6.871e-5342.22Syntaxin-122 OS=Arabidopsis thaliana GN=SYP122 PE=... [more]
SY111_ARATH7.127e-4240.83Syntaxin-related protein KNOLLE OS=Arabidopsis tha... [more]
SY112_ARATH9.037e-2929.88Syntaxin-112 OS=Arabidopsis thaliana GN=SYP112 PE=... [more]
STX_APLCA7.935e-1725.21Syntaxin OS=Aplysia californica PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12B11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12B11-C21-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047113 ID=CX047113; Name=CX047113; organism=Citrus sinensis; type=EST; length=824bp
TGGAAAATTTCTTTAAAAAGGTTCAAGATATTGACAAAGAATATGAGAAG
TTGGAGAAACTACTCAAAAAGCTACAGGGTGCACATGAGGAGTCAAAGTC
TGTAACCAAGGCTCCTGCCATGAAAGCAATCAAGAAGCGAATGGAGAAAG
ATGTTGATGAAGTTGGGAAAATTTCTCGTTTCATAAAGTCGAAGATTGAA
GAACTGGATAGAGAGAATTTAACAAGTAGGCAGAAGCCTGGCTGTGGAAA
AGGAACAGGAGTAGATCGATCAAGAACAGCAACAACTCTTGGCTTGAAAA
AGAAGTTCAAAGACAAAATGGGTGAATTTCAGGTTCTAAGGGAAAACATC
CATCAAGAGTATCGAGAGGTGGTGGAGAGGCGAGTTTATACAGTAACCGG
CAAAAGGGCTGATGAAGAGACAATTGACCAATTGATTGAGACCGGGGACA
GTGAACAGATATTCCAGAAAGCAATCCAAGAACAAGGTCGAGGCCAGATA
ATGGACACTCTGGCTGAAATTCAAGAACGCCATGATGCCGTTAGAGATTT
GGAAAGGAAGCTTCTTGAGTTACAACAGATCTTTCTGGATATGGCGGTGT
TGGTAGATGCACAGGGAGACATGCTGGACAATATAGAATCTCAGGTGTCA
AGTGCTGTAGATCACGTGCAGTCAGGCAATACTGCCCTCCAAAAGGCGAA
AAAGCTACAGAAGAACTCCAGGAAATGGATGTGCATTGCCATCATCATCC
TTCTCATCATTGTTGCAATCATAGTTGTTGCGGTAATCAAGCCATGGAGT
AGCAACAAAGGTGCTTAGCTGCTC
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