CX047103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX047103 vs. ExPASy Swiss-Prot
Match: M750_ARATH (Uncharacterized mitochondrial protein AtMg00750 OS=Arabidopsis thaliana GN=AtMg00750 PE=4 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.513e-16 Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = -1 Query: 150 VLQCGFYWPTIFRDAYTFCSSCDRCQRMGSITRRNMMPLNPILVVEIFDVWGIDFM 317 VLQ GFYWPT F+DA+ F SSCD CQR G+ T+RN MP + IL VE+FDVWGI FM Sbjct: 35 VLQAGFYWPTTFKDAHGFVSSCDACQRKGNFTKRNEMPQHFILEVEVFDVWGIYFM 90
BLAST of CX047103 vs. ExPASy Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.821e-15 Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = -1 Query: 636 QLNYSTTEKEMLAVVFALEKFRSYLIGCKIIVFTDHAALKYLLTKKDAKARLIRWVLLLQEFDLEFKDKKGTENVVADHLSRLHFD 893 ++NYST EKE+LA+V+A + FR YL+G + +DH L +L KD ++L RW + L EFD + K KG EN VAD LSR+ + Sbjct: 542 EINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSRIKLE 627
BLAST of CX047103 vs. ExPASy Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.452e-14 Identity = 83/290 (28.62%), Postives = 128/290 (44.14%), Query Frame = -1 Query: 63 AQLNYSTTEKEMLAVVFALEKFRSYLIGCKIIVFTDHAALKYLLTKKDAKARLIRWVLLLQEFDLEFKDKKGTENVVADHLSRLHFDTIT----EPLILN--ESFPDEQLMNVEVLPWYADIVNYLVTGKLPEHWTKQDKAKFFAEI--KNFFWDDPYLFKYCADQIVRRCVPENEIQNILSFCHAKAC-GGHFSAKKTATKVLQCGFYWPTIFRDAYTFCSSCDRCQRMGSITRRNMMPLNPILVVE--IFDVWGIDFMGPFPPSFGH-QYILVGVDYVSKWVEAIPCR 896 AQ NY E E+L ++ AL FR L G + TDH +L L K + R+ RW+ L +D + G +NVVAD +SR + TIT P+ +S+ + VL ++ + VT + + K +E KN+ +D + Y D++V VP + ++ H GGHF T K+ +YWP + + +C +CQ + S R L P+ + E D+ +DF+ PP+ + ILV VD SK I R Sbjct: 952 AQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIY-TITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMI--YYQDRLV---VPIKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPI-YYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDI-SMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATR 1233
BLAST of CX047103 vs. ExPASy Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.452e-14 Identity = 83/290 (28.62%), Postives = 128/290 (44.14%), Query Frame = -1 Query: 63 AQLNYSTTEKEMLAVVFALEKFRSYLIGCKIIVFTDHAALKYLLTKKDAKARLIRWVLLLQEFDLEFKDKKGTENVVADHLSRLHFDTIT----EPLILN--ESFPDEQLMNVEVLPWYADIVNYLVTGKLPEHWTKQDKAKFFAEI--KNFFWDDPYLFKYCADQIVRRCVPENEIQNILSFCHAKAC-GGHFSAKKTATKVLQCGFYWPTIFRDAYTFCSSCDRCQRMGSITRRNMMPLNPILVVE--IFDVWGIDFMGPFPPSFGH-QYILVGVDYVSKWVEAIPCR 896 AQ NY E E+L ++ AL FR L G + TDH +L L K + R+ RW+ L +D + G +NVVAD +SR + TIT P+ +S+ + VL ++ + VT + + K +E KN+ +D + Y D++V VP + ++ H GGHF T K+ +YWP + + +C +CQ + S R L P+ + E D+ +DF+ PP+ + ILV VD SK I R Sbjct: 926 AQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVY-TITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMI--YYQDRLV---VPIKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPI-YYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDI-SMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATR 1207
BLAST of CX047103 vs. ExPASy Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13 Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = -1 Query: 636 DAQLNYSTTEKEMLAVVFALEKFRSYLIGCKIIVFTDHAALKYLLTKKDAKARLIRWVLLLQEFDLEFKDKKGTENVVADHLSRLHFD 899 D +LNYS EKE+LA+V+A + FR YL+G + ++ +DH L++L K+ A+L RW + L E+ + KG EN VAD LSR+ + Sbjct: 539 DHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSRIKIE 626
BLAST of CX047103 vs. ExPASy Swiss-Prot
Match: POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.318e-12 Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 645 NYSTTEKEMLAVVFALEKFRSYLIGCKII-VFTDHAALKYLLTKKDAKARLIRWVLLLQEFDLEFKDKKGTENVVADHLSRL 887 NY+T EKEMLA++++L+ R+YL G I V+TDH L + L ++ A+L RW ++E++ E K G NVVAD LSR+ Sbjct: 474 NYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSRI 555 The following BLAST results are available for this feature:
BLAST of CX047103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047103 ID=CX047103; Name=CX047103; organism=Citrus sinensis; type=EST; length=899bpback to top |