CX047074

Overview
NameCX047074
Unique NameCX047074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:54..536. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGKY_TOBAC (Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 7.242e-31
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 214
            KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLA+KMSHISTGGGASLELLEGK LPGVLALDDA
Sbjct:  331 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLAEKMSHISTGGGASLELLEGKPLPGVLALDDA 401          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.043e-29
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 214
            KFAAGT+AIAK+LAEL+GKGVTTIIGGGDSVAAVEK GLADKMSHISTGGGASLELLEGK LPGVLALD+A
Sbjct:  331 KFAAGTDAIAKQLAELTGKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 401          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGKH_TOBAC (Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.394e-28
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 214
            KFA GTEAIAKKLA+LSGKGVTTIIGGGDSVAAVEKVG+A  MSHISTGGGASLELLEGK LPGV+ALD+A
Sbjct:  405 KFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVASVMSHISTGGGASLELLEGKVLPGVIALDEA 475          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGKH_ARATH (Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 2.848e-27
Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 214
            KFAAGTEAIA KLAELS KGVTTIIGGGDSVAAVEKVG+A  MSHISTGGGASLELLEGK LPGV+ALD+A
Sbjct:  403 KFAAGTEAIANKLAELSEKGVTTIIGGGDSVAAVEKVGVAGVMSHISTGGGASLELLEGKVLPGVIALDEA 473          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGKH_WHEAT (Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.719e-27
Identity = 62/70 (88.57%), Postives = 66/70 (94.29%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            KFA GTE+IAKKLAELS KGVTTIIGGGDSVAAVEKVG+AD MSHISTGGGASLELLEGK LPGV+ALD+
Sbjct:  402 KFAVGTESIAKKLAELSKKGVTTIIGGGDSVAAVEKVGVADVMSHISTGGGASLELLEGKELPGVVALDE 471          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_SYNS3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.082e-26
Identity = 62/71 (87.32%), Postives = 63/71 (88.73%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 214
            KFAAGT AIA  LAELSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  331 KFAAGTNAIATTLAELSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGKH_SPIOL (Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.413e-26
Identity = 61/71 (85.92%), Postives = 66/71 (92.96%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 214
            KFAAGTEAIAKKL E+S KG TTIIGGGDSVAAVEKVG+A+ MSHISTGGGASLELLEGK LPGVLAL++A
Sbjct:  358 KFAAGTEAIAKKLEEISKKGATTIIGGGDSVAAVEKVGVAEAMSHISTGGGASLELLEGKQLPGVLALNEA 428          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_PROMM (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pgk PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.411e-26
Identity = 61/71 (85.92%), Postives = 63/71 (88.73%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 214
            KFAAGT AIA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  331 KFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_PROM3 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=pgk PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.411e-26
Identity = 61/71 (85.92%), Postives = 63/71 (88.73%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 214
            KFAAGT AIA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  331 KFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_SYNPX (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH8102) GN=pgk PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.112e-26
Identity = 61/71 (85.92%), Postives = 62/71 (87.32%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 214
            KFA GT AIA  LAELSGKG  TIIGGGDSVAAVEK GLADKMSHISTGGGASLELLEGK LPGV AL+DA
Sbjct:  331 KFATGTNAIATTLAELSGKGCCTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKVLPGVAALNDA 401          
The following BLAST results are available for this feature:
BLAST of CX047074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKY_TOBAC7.242e-3197.18Phosphoglycerate kinase, cytosolic OS=Nicotiana ta... [more]
PGKY_WHEAT3.043e-2991.55Phosphoglycerate kinase, cytosolic OS=Triticum aes... [more]
PGKH_TOBAC4.394e-2888.73Phosphoglycerate kinase, chloroplastic OS=Nicotian... [more]
PGKH_ARATH2.848e-2788.73Phosphoglycerate kinase, chloroplastic OS=Arabidop... [more]
PGKH_WHEAT3.719e-2788.57Phosphoglycerate kinase, chloroplastic OS=Triticum... [more]
PGK_SYNS31.082e-2687.32Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGKH_SPIOL1.413e-2685.92Phosphoglycerate kinase, chloroplastic (Fragment) ... [more]
PGK_PROMM2.411e-2685.92Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM32.411e-2685.92Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNPX4.112e-2685.92Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A03-A5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047074 ID=CX047074; Name=CX047074; organism=Citrus sinensis; type=EST; length=483bp
TAAATTTGCTGCTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCA
GCGGGAAGGGAGTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCC
GTAGAGAAGGTTGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGG
TGGAGCCAGCTTAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTG
CTCTTGATGATGCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTG
CCATTTCCAGAGTTGTATGTGTGGCTGGTTGTCAGCCCAGAGTGGATAAA
AGTTAAACTTTATCATTAGAGTTGGTTTTGTAGATGCTGTAAGAGTAAAA
ATAAATTCTTTCTCACAGGCATCAATGGTGATGCATTTTTCTGGATTTGA
TCCCATTTTGGAACATTGTGATGGTAAGGCTATAAGTTTCCTGAAGTCAA
GTTCTTGTTCCTTTCTGAAAAAAAAAAAAAAAA
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