CX047053

Overview
NameCX047053
Unique NameCX047053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5497 contig Csv1_Contig5497:49..912. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: ATK1_ARATH (Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 2.274e-94
Identity = 174/213 (81.69%), Postives = 189/213 (88.73%), Query Frame = -1
Query:  226 SRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSYG 864
            +R    DL R ++G  GKQY I HD NG+THVSDLTI DVCS+ +ISSLL+QAAQSRSVGKTQMNE SSRSHFVFT+RI GVNE+TEQQVQGVLNLIDLAGSERLS+SGATGDRLKETQAINKSLS+LSDVIFALAKKEDH+P+RNSKLTYLLQPCLG DSKTLMFVNISPD  S GESLCSLRFAARVNACEIG+P RQ + K  DSRLSYG
Sbjct:  581 NRTTSMDLVRADSGTSGKQYTITHDVNGHTHVSDLTIFDVCSVGKISSLLQQAAQSRSVGKTQMNEQSSRSHFVFTMRISGVNESTEQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSALSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPTSAGESLCSLRFAARVNACEIGIPRRQTSTKLLDSRLSYG 793          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: ATK3_ARATH (Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 8.662e-86
Identity = 160/207 (77.29%), Postives = 184/207 (88.89%), Query Frame = -1
Query:  226 DLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSYG 846
            +  RT++GV  +++AIKHDA+GNTHV++LTI+DV S  E+S LL  AA++RSVGKTQMNE SSRSHFVFTLRI GVNE+TEQQVQGVLNLIDLAGSERLS+SG+TGDRLKETQAINKSLSSL DVIFALAKKEDH+P+RNSKLTYLLQPCLG D+KTLMFVNI+P+S S GESLCSLRFAARVNACEIG P RQ  +K  ++RLS G
Sbjct:  548 EAVRTDSGVSPQKHAIKHDASGNTHVAELTILDVKSSREVSFLLDHAARNRSVGKTQMNEQSSRSHFVFTLRISGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLGDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDAKTLMFVNIAPESSSTGESLCSLRFAARVNACEIGTPRRQTNIKPLENRLSLG 754          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: ATK2_ARATH (Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.608e-82
Identity = 155/207 (74.88%), Postives = 176/207 (85.02%), Query Frame = -1
Query:  226 DLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSYG 846
            +  R +NGV  ++YAIKHDA+GNTHV +LT+VDV S  ++S LL  AA++RSVGKT MNE SSRSHFVFTL+I G NE+TEQQVQGVLNLIDLAGSERLS+SG+TGDRLKETQAINKSLSSL DVIFALAKKEDH+P+RNSKLTYLLQPCLG DSKTLMFVNI+P+  S GESLCSLRFAARVNACEIG   R +  +  D RLS G
Sbjct:  539 EAVRADNGVSPQKYAIKHDASGNTHVVELTVVDVRSSKQVSFLLDHAARNRSVGKTAMNEQSSRSHFVFTLKISGFNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLGDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNITPEPSSTGESLCSLRFAARVNACEIGTAHRHVNARPLDYRLSLG 745          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF2_DICDI (Kinesin-related protein 2 OS=Dictyostelium discoideum GN=kif2 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.401e-53
Identity = 110/183 (60.11%), Postives = 139/183 (75.96%), Query Frame = -1
Query:  265 QYAIKHDANGN-THVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQ 810
            +Y IKH+ + N T V+++T+V V   S++  LL  A ++RSV KT  NE SSRSH VF L++ G N+ + ++ QG+LNLIDLAGSER+SRSG  G +LKETQAINKSLSSL DVI ALA KE HIPYRNSKLT+LLQ  +G +SKTLMFVNISP+   + ES  SLRFAA+VN+CE+G   +Q
Sbjct:  607 KYEIKHNPDTNVTTVTNMTVVPVTHPSQVYELLNLANKNRSVAKTLCNERSSRSHTVFQLKLIGYNQQSSERTQGLLNLIDLAGSERVSRSGVEGKQLKETQAINKSLSSLGDVISALANKEQHIPYRNSKLTFLLQNSIGGNSKTLMFVNISPELKDLQESTSSLRFAAKVNSCELGAARKQ 789          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KLPA_EMENI (Kinesin-like protein klpA OS=Emericella nidulans GN=klpA PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 6.069e-47
Identity = 106/202 (52.48%), Postives = 137/202 (67.82%), Query Frame = -1
Query:  253 SDLTRTENGVPGKQYAIKHDAN-GNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL--AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLK 849
            +DL      +  K+  I+HD   G T ++D T V + S   + SLL++AA +RSV  T+ NE SSRSH +F L++ G N  T ++ +G LNL+DLAGSERLS SGATGDRLKETQ IN+SLS L DVI AL   KK+ HIPYRNSKLTYLLQ  LG +SKTLMFV +SP    + E+L SL+FA +V+   IG   +Q  ++
Sbjct:  560 NDLLGKAEELDKKKLEIRHDMQRGKTTITDATTVQLESPEMVESLLKRAAANRSVAATKANERSSRSHSIFILKLIGENYITGERSEGTLNLVDLAGSERLSHSGATGDRLKETQNINRSLSCLGDVIAALGQGKKDGHIPYRNSKLTYLLQFSLGGNSKTLMFVMVSPLQAHLSETLTSLKFATKVHNTHIGTAKKQTRVR 761          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: CTK2_XENLA (Carboxy-terminal kinesin 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.386e-43
Identity = 98/179 (54.75%), Postives = 126/179 (70.39%), Query Frame = -1
Query:  280 QYAIK--HDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 810
            +Y I+  + AN   +V++L  V V  + E+  LL+ A  +RSV KT +N+ SSRSH VF L+I G N+  + +   +++LIDLAGSERL RS +TGDRLKETQ IN SLS+L  VI +L  K+ HIPYRNSKLTYLLQ  LG ++K LMFVNISP   +  ESL SLRFA++VN C IG
Sbjct:  458 EYEIRKVNSANMLLYVTNLRYVKVSCVEEVHELLKIAKANRSVAKTAINDRSSRSHSVFQLKIEGENKQRDLKTSSMISLIDLAGSERLDRSLSTGDRLKETQCINTSLSTLGMVITSLCNKDSHIPYRNSKLTYLLQNSLGGNAKVLMFVNISPLEENFAESLNSLRFASKVNECVIG 636          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KLP2_SCHPO (Kinesin-like protein 2 OS=Schizosaccharomyces pombe GN=klp2 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.317e-43
Identity = 103/188 (54.79%), Postives = 131/188 (69.68%), Query Frame = -1
Query:  259 KQYAIKHDAN-GNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL--AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLT 813
            K+  I HD   G T ++++T   + +  +++ LL QA+++RSV  T  NE+SSRSH VF L + G N  T +  +  LNLIDLAGSERLS S + G+RLKETQAINKSLS L DVI AL   K+  +IPYRNSKLT LLQ  LG +SKTLMFVNISP    V E+LCSLRFA +VN  +IG  +R++T
Sbjct:  630 KKLEIYHDTKAGRTTITNITSEPLDTPEQVTWLLDQASKNRSVAATNANEHSSRSHSVFMLHLNGSNSTTGETCRSTLNLIDLAGSERLSSSQSVGERLKETQAINKSLSCLGDVIHALGSGKEGTYIPYRNSKLTNLLQYSLGGNSKTLMFVNISPLKQHVPETLCSLRFATKVNNTQIGT-ARKVT 816          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KLP1_SCHPO (Kinesin-like protein 1 OS=Schizosaccharomyces pombe GN=klp1 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 8.488e-41
Identity = 97/197 (49.24%), Postives = 126/197 (63.96%), Query Frame = -1
Query:  280 DLTRTENGVPGKQYAIKHDANGN-THVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL-------AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 846
            DL      +   ++ I HD     T V +++I+D      +  +L +A ++R +  T+ NE SSRSH VF L I G N  T+Q  +G LNL+DLAGSERLS S A GDRL+ETQAINKSLS L DVI AL        K++ HIPYRNSKLTYLL+  LG+ +KTLMFVN+SP      ++L SLRFA +VN  ++G
Sbjct:  629 DLLNKAEMLKNPKHDIHHDEKERRTTVDNVSIIDFNEEDTVYKMLNRAGENRFIAATKANERSSRSHTVFMLYIDGENSRTKQICKGTLNLVDLAGSERLSYSQAVGDRLRETQAINKSLSCLGDVIHALGNASNSTTKEKSHIPYRNSKLTYLLKYSLGKGAKTLMFVNVSPLKSQFMDTLNSLRFATKVNDTKVG 825          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KAR3_YEAST (Kinesin-like protein KAR3 OS=Saccharomyces cerevisiae GN=KAR3 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.731e-39
Identity = 94/195 (48.21%), Postives = 123/195 (63.08%), Query Frame = -1
Query:  283 SDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISE---ISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKED---HIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEI 849
            SD    E+   G ++ I+HD    T  + +T V  C +     +  +L++A + RS   T  NE+SSRSH +F + + G N  T     G LNL+DLAGSER++ S   GDRL+ETQ INKSLS L DVI AL + +    HIP+RNSKLTYLLQ  L  DSKTLMFVNISP S  + E+L SLRFA++VN+  +
Sbjct:  533 SDNNNKEDTSIGLKHEIRHDQE--TKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRL 725          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIFC3_MOUSE (Kinesin-like protein KIFC3 OS=Mus musculus GN=Kifc3 PE=1 SV=4)

HSP 1 Score: 161.77 bits (408), Expect = 4.658e-39
Identity = 87/185 (47.03%), Postives = 122/185 (65.95%), Query Frame = -1
Query:  238 DANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSR 792
            D +G  +V  LT   V S+ +I+ +      +R+   T +NE+SSRSH +  + + GV+ +T  +  G LNL+DLAGSER+ +SGA G+RL+E Q IN+SLS+L DVI AL  ++ H+P+RNSKLTYLLQ  L  DSKTLM V +SP   +  E+L SLRFA RV + E+G  SR+  L +  S+
Sbjct:  599 DGSGQLYVPGLTEFQVQSVDDINKVFEFGYNNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGNRLREAQHINRSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLRFAERVRSVELGPGSRRTELGSWSSQ 783          
The following BLAST results are available for this feature:
BLAST of CX047053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
ATK1_ARATH2.274e-9481.69Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=... [more]
ATK3_ARATH8.662e-8677.29Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=... [more]
ATK2_ARATH2.608e-8274.88Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=... [more]
KIF2_DICDI7.401e-5360.11Kinesin-related protein 2 OS=Dictyostelium discoid... [more]
KLPA_EMENI6.069e-4752.48Kinesin-like protein klpA OS=Emericella nidulans G... [more]
CTK2_XENLA2.386e-4354.75Carboxy-terminal kinesin 2 OS=Xenopus laevis PE=2 ... [more]
KLP2_SCHPO5.317e-4354.79Kinesin-like protein 2 OS=Schizosaccharomyces pomb... [more]
KLP1_SCHPO8.488e-4149.24Kinesin-like protein 1 OS=Schizosaccharomyces pomb... [more]
KAR3_YEAST2.731e-3948.21Kinesin-like protein KAR3 OS=Saccharomyces cerevis... [more]
KIFC3_MOUSE4.658e-3947.03Kinesin-like protein KIFC3 OS=Mus musculus GN=Kifc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11H03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11H03-P6-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047053 ID=CX047053; Name=CX047053; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCAT
CAACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCA
ATAAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTC
ACCATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATG
ACAAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCA
GCCTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGAC
TCTCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAAT
CAGGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACAC
GGCTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTC
CTTCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTAT
TTATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGAT
AATCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTG
TTGTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAAT
GGCTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTC
TGTGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATC
AACAATCGTAAGGTCGCTGACATGAGTGTTTCCATTTGCATCATGTTTAA
TTGCATACTGCTTTCCAGGAACACCATTCTCCGTACGTGTCAAATCTGAA
CCACCAGCTCGACT
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