CX047043
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX047043 vs. ExPASy Swiss-Prot
Match: SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.486e-68 Identity = 133/252 (52.78%), Postives = 166/252 (65.87%), Query Frame = 2 Query: 35 ESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEFGA 790 ES +WT+LP ++TS IL ++GAI++L +AQ+VC SW R+C DP+MWR IDMHNLGDL DMD++LE MCRHAVDRS G L+ I I YFGT +LL YIA + C I+D GF EA+ P E+L VG C +++ KLN P+ E DDDA AIAE M LRHLQL GN L++ GL AILD C +LE LDLR+CFNVNLVG L K C E ++ +RHPNDS HD + G+ Sbjct: 15 ESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLPLEELELSYCSFSV-ESLRVVGQCCLNMKTLKLNKH----PQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVVRHPNDSIHDIDIGS 261
BLAST of CX047043 vs. ExPASy Swiss-Prot
Match: FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.619e-65 Identity = 128/255 (50.20%), Postives = 165/255 (64.71%), Query Frame = 2 Query: 44 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKI-----ECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEFGAD 793 +W +LP+ +TS+IL ++GAI++L +AQ+VC W R+C DP+MWR ID+ N D +DLE MCRHAVDRS+G L+ I I Y+GT++L+ YIA V C+ I+D+G +A+ P E+L +G CP L++ KLN R P+I DD+AKAIAE+M LRHLQL GN LTN GL AILD CPHLE LDLRQCFN+NLVG L K C ERI+DLR PNDS D + G+D Sbjct: 180 NWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLN----RAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIKDLRCPNDSDDDSDDGSD 430 HSP 2 Score: 106.301 bits (264), Expect = 2.214e-22 Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 548 DDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEFGA 790 DD+ AIAE M LRHL+LFGN LTN+ L+AILD C HL LDLR+CFN+NL+G L K C+ERIRDLR P+DST D F A Sbjct: 19 DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRCSERIRDLRRPDDSTADSPFDA 99
BLAST of CX047043 vs. ExPASy Swiss-Prot
Match: FB221_ARATH (Putative F-box protein At4g05480 OS=Arabidopsis thaliana GN=At4g05480 PE=4 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.769e-57 Identity = 120/270 (44.44%), Postives = 159/270 (58.89%), Query Frame = 2 Query: 29 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRC----------PKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLES-LDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEFGADFQDF 805 ++E +W LP ++T++IL ++ D+L +A+++C +W RIC DP+MWR I NL D + D E MCRH VD S G LL INIE+F +D LL YI ++++G I+ P + L+A+G CP L++ KLN+ G P +ECDDDA AIAE+M LRHLQL GN LTN GL AILD CPHLE LD+R+CFN+NLVG L K C +RI++LR P+DST DY FG DF Sbjct: 34 DEERINWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKI---NLRDCLMYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEKLPLLETLVIFHSSIKLD-LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRCMKRIKELRRPHDSTADYPFGQASPDF 299
BLAST of CX047043 vs. ExPASy Swiss-Prot
Match: FBL21_ARATH (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana GN=FBL21 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.281e-50 Identity = 113/267 (42.32%), Postives = 147/267 (55.06%), Query Frame = 2 Query: 32 QESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINI-EYFGTDELLQYIAXXXXXXXXXXXVSCY-NISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPK--------------IECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEF 784 +E +W LP ++T++IL ++ D+L +AQ+VC W RIC DP+MWR I N D + D MCRH VD S G LL IN+ E+F +D LL YI C+ ++ G AI P + L+A+G CP L++ KLN+ G P +ECDDDA AIAE+M L HLQL N LTN GL AILD CPHLE LD+R+CF ++LVG L K C E I++LR P DST DY + Sbjct: 41 KERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKI---NTRDCLMYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGM--CFPRVTKLGVVNAIAKIPLLETLEVTHSCIKLD-LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEKRCLEMIKELRRPGDSTADYPY 301
BLAST of CX047043 vs. ExPASy Swiss-Prot
Match: FBL22_ARATH (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana GN=FBL22 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.538e-50 Identity = 111/262 (42.37%), Postives = 148/262 (56.49%), Query Frame = 2 Query: 5 SRMSTGTAEQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEY--FGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEF 784 S++ E++ +W +LP D+ S+IL ++ +++L +A++VC SW R+ DP +WR IDM NL L+ + + +E CRH VD S G LL NI+ F T LL Y+A V I+ G EAI P +E + +G CP L++ KL G E D+DA AIA+ M GL HLQL N LTN+GL AILD CPHLE LDLRQCFN+NL G L + C ERI+D R PND DY + Sbjct: 13 SQLPVMKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYCI-YAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR-VKGGQITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLV--GFWSHLNESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIKDFRCPNDVLDDYNY 270
BLAST of CX047043 vs. ExPASy Swiss-Prot
Match: FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9 PE=4 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.175e-45 Identity = 101/231 (43.72%), Postives = 134/231 (58.01%), Query Frame = 2 Query: 44 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMH---NLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEA-LEAVGSLCPLLRSFKLNNRGH-RCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGK 721 +W +LP ++TS+IL ++GAI++L +AQRVC SW R+C DP+MWR ID+ NL + ++ + +E +C AVD S G LL INI+Y L YIA V C + +G EA P +E L+ VG CP LR+ KLN G +C CD A AIAE M GLRHLQLF N L+ GL AIL+ CPHL++L L QC N+N+VG + K Sbjct: 20 NWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKC----CDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246
BLAST of CX047043 vs. ExPASy Swiss-Prot
Match: SKIP1_ARATH (F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.472e-15 Identity = 66/248 (26.61%), Postives = 106/248 (42.74%), Query Frame = 2 Query: 29 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGD-------LW--DMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCE-AIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLN----NRGH----------RCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVN 700 E++ DW L ++ I+S++ ++ T V SWL +C DP +W D+ D LW + + ++ M R VD S G L I + + +D L Y A S N++D + A + + L +G CP LR K N + H CP+ + D +A AI ++M L HL++ + L+ GL +I + CP LE LDL C +++ Sbjct: 2 EEDGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYPESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQ-DGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGCVHLS 247 The following BLAST results are available for this feature:
BLAST of CX047043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047043 ID=CX047043; Name=CX047043; organism=Citrus sinensis; type=EST; length=841bpback to top |