CX047042
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX047042 vs. ExPASy Swiss-Prot
Match: FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.273e-38 Identity = 87/169 (51.48%), Postives = 109/169 (64.50%), Query Frame = -3 Query: 416 DELLQYIANSQXNLRNLRLVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXSQEALEAVGSLCPLLRSFKLNNRGHRCPKIEC-----DDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEFGAD 907 ++L+ YIA+ NL++L LV C+ I+D+G +A+ P S E+L +G CP L++ KLN R P+I DD+AKAIAE+M LRHLQL GN LTN GL AILD CPHLE LDLRQCFN+NLVG L K C ERI+DLR PNDS D + G+D Sbjct: 266 NDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLN----RAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIKDLRCPNDSDDDSDDGSD 430 HSP 2 Score: 107.457 bits (267), Expect = 1.127e-22 Identity = 56/94 (59.57%), Postives = 67/94 (71.28%), Query Frame = -3 Query: 380 DDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEFGADFQDFCWSSVEDY 661 DD+ AIAE M LRHL+LFGN LTN+ L+AILD C HL LDLR+CFN+NL+G L K C+ERIRDLR P+DST D F A D + +DY Sbjct: 19 DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRCSERIRDLRRPDDSTADSPFDAS-SDIYSAGEDDY 111
BLAST of CX047042 vs. ExPASy Swiss-Prot
Match: SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 3.056e-36 Identity = 88/185 (47.57%), Postives = 111/185 (60.00%), Query Frame = -3 Query: 350 ELLQYIANSQXNLRNLRLVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXSQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEFGADFQDFCWSSVEDYPSGISDIELV 904 +LL YIA+ NLR+LRL+ C I+D GF EA+ P E+L VG C +++ KLN P+ E DDDA AIAE M LRHLQL GN L++ GL AILD C +LE LDLR+CFNVNLVG L K C E ++ +RHPNDS HD + G SS ++ P SDI+L+ Sbjct: 105 DLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLPLEELELSYCSFSV-ESLRVVGQCCLNMKTLKLNKH----PQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVVRHPNDSIHDIDIG--------SSEDEDPYDFSDIDLM 276
BLAST of CX047042 vs. ExPASy Swiss-Prot
Match: FB221_ARATH (Putative F-box protein At4g05480 OS=Arabidopsis thaliana GN=At4g05480 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.284e-34 Identity = 84/195 (43.08%), Postives = 111/195 (56.92%), Query Frame = -3 Query: 356 DELLQYIANSQXNLRNLRLVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXSQEALEAVGSLCPLLRSFKLNNRGHRC----------PKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLES-LDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEFGADFQDFCWSSVEDYPSGISDIE 907 D LL YI + NL++L + ++++G I+ P + L+A+G CP L++ KLN+ G P +ECDDDA AIAE+M LRHLQL GN LTN GL AILD CPHLE LD+R+CFN+NLVG L K C +RI++LR P+DST DY FG DF + + G + E Sbjct: 122 DSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEKLPLLETLVIFHSSIKLD-LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRCMKRIKELRRPHDSTADYPFGQASPDFAMNLEDKVTFGRQESE 315
BLAST of CX047042 vs. ExPASy Swiss-Prot
Match: FBL22_ARATH (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana GN=FBL22 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.593e-31 Identity = 82/187 (43.85%), Postives = 98/187 (52.41%), Query Frame = -3 Query: 356 LLQYIANSQXNLRNLRLVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXSQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEF-----GADFQDFCWSSVEDYPSGISDIE 901 LL Y+A NLR LR V I+ G EAI P +E + +G CP L++ KL G E D+DA AIA+ M GL HLQL N LTN+GL AILD CPHLE LDLRQCFN+NL G L + C ERI+D R PND DY + +D E+Y G D E Sbjct: 115 LLNYMAERSSNLRRLR-VKGGQITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLV--GFWSHLNESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIKDFRCPNDVLDDYNYVIFSDNGSIEDEKGEEEENYSYGSDDTE 298
BLAST of CX047042 vs. ExPASy Swiss-Prot
Match: FBL21_ARATH (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana GN=FBL21 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.469e-30 Identity = 78/176 (44.32%), Postives = 98/176 (55.68%), Query Frame = -3 Query: 425 DELLQYIANSQXNLRNLRLVSCY-NISDQGFCEAIKGFPXXXXXXXXXXXXSQEALEAVGSLCPLLRSFKLNNRGHRCPK--------------IECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDSTHDYEF 907 D LL YI + NLR+L L C+ ++ G AI P + L+A+G CP L++ KLN+ G P +ECDDDA AIAE+M L HLQL N LTN GL AILD CPHLE LD+R+CF ++LVG L K C E I++LR P DST DY + Sbjct: 129 DSLLSYITDR--NLRSLGLGMCFPRVTKLGVVNAIAKIPLLETLEVTHSCIKLD-LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEKRCLEMIKELRRPGDSTADYPY 301
BLAST of CX047042 vs. ExPASy Swiss-Prot
Match: FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9 PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.472e-22 Identity = 63/139 (45.32%), Postives = 78/139 (56.12%), Query Frame = -3 Query: 488 LQYIANSQXNLRNLRLVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXSQEA-LEAVGSLCPLLRSFKLNNRGH-RCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGK 898 L YIA+ NLR L +V C + +G EA P +E L+ VG CP LR+ KLN G +C CD A AIAE M GLRHLQLF N L+ GL AIL+ CPHL++L L QC N+N+VG + K Sbjct: 112 LNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKC----CDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246 The following BLAST results are available for this feature:
BLAST of CX047042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047042 ID=CX047042; Name=CX047042; organism=Citrus sinensis; type=EST; length=909bpback to top |