CX047018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX047018 vs. ExPASy Swiss-Prot
Match: SSRA_ARATH (Translocon-associated protein subunit alpha OS=Arabidopsis thaliana GN=At2g21160 PE=2 SV=3) HSP 1 Score: 272.322 bits (695), Expect = 2.632e-72 Identity = 134/198 (67.68%), Postives = 163/198 (82.32%), Query Frame = 2 Query: 23 VGEDAQDFGDGTFSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPYIFAVSKFLQPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGT 616 V ED D D S PGV+TVC+FPKNSA++V AGEETELLVG+KN+G++ V V+ I+ASVHLP+DH LLVQNLT NNA++P S QATFPYIFAVS++LQPG FDLVG I+Y+V+ PYQS FYNGTIEVVESGG +S ESVFL+TLGI LL+L GLW + QV++L+KKTKK KVEVGT +T+AS+DEWL+GT Sbjct: 47 VEEDDHDL-DMNLSSFPGVETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTMLRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESGGLLSGESVFLLTLGIGLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEGT 243
BLAST of CX047018 vs. ExPASy Swiss-Prot
Match: SSRA_DICDI (Translocon-associated protein subunit alpha OS=Dictyostelium discoideum GN=ssr1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.338e-20 Identity = 64/192 (33.33%), Postives = 98/192 (51.04%), Query Frame = 2 Query: 62 SPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPYIFAVSKFLQPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHG------QVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTA 619 +P V IFP N + AAG E+LVG N+ + ++N+ I AS++ P D S+ +QN T F A V AT Y F S++L+P F L+ S+ Y+ + TF+N TI + E ++S FL+ LG+ + G ++G +V+ +SK K A +VE T+ EWL GT+ Sbjct: 34 TPTSDVSFSYIFPDNQDKNFAAGSVVEVLVGFTNNADKALNITHIFASLNHPQDFSVFIQNYTRGDFGIA-VEKGHHATLAYRFVPSEYLEPREFGLLISLEYQDGAQNFTQTFFNSTINITEKETSFDMDSFFLILLGLGFVGGIGYIVYGKMPKQKKVRTVSKVNKNAVRVE-----TEDETAEWLSGTS 219
BLAST of CX047018 vs. ExPASy Swiss-Prot
Match: SSRA_PONAB (Translocon-associated protein subunit alpha OS=Pongo abelii GN=SSR1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12 Identity = 55/199 (27.64%), Postives = 93/199 (46.73%), Query Frame = 2 Query: 20 IVGEDAQDFGDGTFSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPYIFAVSKFLQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 607 +V + ++ G +P DT +F K A + LVG N G V ++ AS P D+ +QN T N VP QATF Y F ++ + F LV ++ Y +++ + +Q +N T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT + + W+ Sbjct: 64 LVEDKEEEDVSGEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGL---HQLLESRKRKRPVQKVEMGTSSQNDVDMSWI 256
BLAST of CX047018 vs. ExPASy Swiss-Prot
Match: SSRA_HUMAN (Translocon-associated protein subunit alpha OS=Homo sapiens GN=SSR1 PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12 Identity = 55/199 (27.64%), Postives = 93/199 (46.73%), Query Frame = 2 Query: 20 IVGEDAQDFGDGTFSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPYIFAVSKFLQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 607 +V + ++ G +P DT +F K A + LVG N G V ++ AS P D+ +QN T N VP QATF Y F ++ + F LV ++ Y +++ + +Q +N T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT + + W+ Sbjct: 64 LVEDKEEEDVSGEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGL---HQLLESRKRKRPIQKVEMGTSSQNDVDMSWI 256
BLAST of CX047018 vs. ExPASy Swiss-Prot
Match: SSRA_RAT (Translocon-associated protein subunit alpha OS=Rattus norvegicus GN=Ssr1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12 Identity = 56/200 (28.00%), Postives = 95/200 (47.50%), Query Frame = 2 Query: 23 VGEDAQDFGDGTFSP--APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPYIFAVSKFLQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 607 + E+ ++ D + P +P DT +F K A + LVG N G V ++ AS P D+ +QN T N VP QATF Y F ++ + F LV ++ Y +++ + +Q +N T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT + + W+ Sbjct: 64 LAEEKEEEEDVSSEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPL-NTIVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVVVGL---HQLLESRKRKRPIQKVEMGTSSQNDVDMSWI 257
BLAST of CX047018 vs. ExPASy Swiss-Prot
Match: SSRA_BOVIN (Translocon-associated protein subunit alpha OS=Bos taurus GN=SSR1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12 Identity = 54/193 (27.98%), Postives = 90/193 (46.63%), Query Frame = 2 Query: 38 QDFGDGTFSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPYIFAVSKFLQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 607 +D G +P DT +F K A + LVG N G V ++ AS P D+ +QN T N VP QATF Y F ++ + F LV ++ Y +++ + +Q +N T+ ++E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT + + W+ Sbjct: 70 EDDVSGEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLVVVGL---HQLLESRKRKRPIQKVEMGTSSQNDVDMSWI 256
BLAST of CX047018 vs. ExPASy Swiss-Prot
Match: SSRA_MOUSE (Translocon-associated protein subunit alpha OS=Mus musculus GN=Ssr1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12 Identity = 53/183 (28.96%), Postives = 87/183 (47.54%), Query Frame = 2 Query: 68 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPYIFAVSKFLQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 607 +P DT +F K A + LVG N G V ++ AS P D+ +QN T N VP QATF Y F ++ + F LV ++ Y +++ + +Q +N T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT + + W+ Sbjct: 80 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVVVGL---HQLLESRKRKRPIQKVEMGTSSQNDVDMSWI 256
BLAST of CX047018 vs. ExPASy Swiss-Prot
Match: SSRA_CANFA (Translocon-associated protein subunit alpha OS=Canis familiaris GN=SSR1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12 Identity = 52/183 (28.42%), Postives = 87/183 (47.54%), Query Frame = 2 Query: 68 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPYIFAVSKFLQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 607 +P DT +F K A + LVG N G V ++ AS P D+ +QN T N VP QATF Y F ++ + F LV ++ Y +++ + +Q +N T+ ++E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT + + W+ Sbjct: 80 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLVVVGL---HQLLESRKRKRPIQKVEMGTSSQNDVDMSWI 256
BLAST of CX047018 vs. ExPASy Swiss-Prot
Match: SSRA_ONCMY (Translocon-associated protein subunit alpha OS=Oncorhynchus mykiss GN=ssr1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11 Identity = 52/193 (26.94%), Postives = 88/193 (45.60%), Query Frame = 2 Query: 38 QDFGDGTFSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPYIFAVSKFLQPGTFDLVGSIVYEVDQ-HPYQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 607 +D G + P DT +F + A E + LVG N G V +++AS P D +QN T + P QA+F Y F ++ + F LV + Y+ + + +Q+ YN T+ +VE + E++F+ G+ +L +FG++ QV + + + KVE GTG + W+ Sbjct: 71 EDAAVGDVTSHPDADTTIVFV--TGEEFPANEIVKFLVGFTNKGSQDFTVHSLEASFRYPQDFQFYIQNFTALPLSTVVQP-QKQASFEYSFIPAQPMAGRPFGLVILLNYQDSEGNGFQTAIYNQTVTIVELEEGLDGETIFMYIFLTGLVVLAVFGMY---QVLESRTRKRFPVKVETGTGGMNGVDISWI 257 The following BLAST results are available for this feature:
BLAST of CX047018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047018 ID=CX047018; Name=CX047018; organism=Citrus sinensis; type=EST; length=905bpback to top |