CX047004

Overview
NameCX047004
Unique NameCX047004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 7.247e-55
Identity = 105/179 (58.66%), Postives = 132/179 (73.74%), Query Frame = 2
Query:    2 RKTVVFLVLAFAFASKGYAQEAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKPSL 538
            R T  FL+L             A LVPAI++FGDS VDVGNNN+L T F+A+YPPYGR+F +H+ TGRF +GKL TD TA+TLGF  Y PAYLS +A+GKNLLIGANFASA SGYD   +++NHAI L  Q++Y++EY+SKL K+AG K++ SIIK AI ++  GS DF+QNYY  P L
Sbjct:    3 RCTSSFLLLTLVSTLSILQISFAQLVPAIMTFGDSVVDVGNNNYLPTLFRADYPPYGRDFANHKATGRFCNGKLATDITAETLGFTKYPPAYLSPEASGKNLLIGANFASAASGYDDKAALLNHAIPLYQQVEYFKEYKSKLIKIAGSKKADSIIKGAICLLSAGSSDFVQNYYVNPLL 181          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL78_ARATH (GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana GN=At5g22810 PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 1.729e-48
Identity = 95/162 (58.64%), Postives = 118/162 (72.84%), Query Frame = 2
Query:   62 EAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLA---GRKQSASIIKDAIYIVGTGSGDFLQNYYAKPSL 538
            +A PLVPAI  FGDS VDVGNNN + T  KAN+PPYGR+F  H PTGRF +GKL TDFTA+ LGFK+Y  AYLS +A GKNLLIGANFASA SGY   T+ +  AISL  QL++Y++Y S++ ++A       +++II + IYIV  GS DF+QNYY  P L
Sbjct:   13 KAQPLVPAIFIFGDSVVDVGNNNDIYTIVKANFPPYGRDFTTHTPTGRFCNGKLATDFTAENLGFKSYPQAYLSKKAKGKNLLIGANFASAASGYYDGTAKLYSAISLPQQLEHYKDYISRIQEIATSNNNSNASAIISNGIYIVSAGSSDFIQNYYINPLL 174          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL73_ARATH (GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.030e-48
Identity = 93/176 (52.84%), Postives = 122/176 (69.32%), Query Frame = 2
Query:   11 VVFLVLAFAFASKGYAQEAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKPSL 538
            + F V+A  +A  G  +   PLVPA++  GDS VD GNNN L T  KAN+PPYGR+F+ H  TGRFS+GKL TDFTA++LGF +Y   YLS +A G NLL GANFAS  SGYD  T+I  +AI+L  QL+ Y+EYQ+K+  + G +++  I   AI+++ TGS DFLQ+YY  P L
Sbjct:    9 MTFSVIACFYAGVGTGE---PLVPALIIMGDSVVDAGNNNRLNTLIKANFPPYGRDFLAHNATGRFSNGKLATDFTAESLGFTSYPVPYLSQEANGTNLLTGANFASGASGYDDGTAIFYNAITLNQQLKNYKEYQNKVTNIVGSERANKIFSGAIHLLSTGSSDFLQSYYINPIL 181          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.239e-46
Identity = 90/172 (52.33%), Postives = 121/172 (70.35%), Query Frame = 2
Query:   23 VLAFAFASKGYAQEAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKPSL 538
            V+A  +A  G  +    LVPA++  GDS VD GNNNH +T  KAN+PPYGR+F+ H  TGRFS+GKL TDFTA+ LGF +Y  AYLS +A   NLL GANFAS  SG+D  T+I  +AI+L+ QL+ Y+EYQ+K+  + G++++  I   AI+++ TGS DFLQ+YY  P L
Sbjct:   13 VIACFYAGVGTGET---LVPALIIMGDSVVDAGNNNHRITLVKANFPPYGRDFVAHSATGRFSNGKLATDFTAENLGFTSYPVAYLSQEANETNLLTGANFASGASGFDDATAIFYNAITLSQQLKNYKEYQNKVTNIVGKERANEIFSGAIHLLSTGSSDFLQSYYINPIL 181          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL59_ARATH (GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana GN=At3g53100 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.239e-46
Identity = 93/176 (52.84%), Postives = 123/176 (69.89%), Query Frame = 2
Query:   11 VVFLVLAFAFASKGYAQEAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKPSL 538
            V+ LV  F   SKG       +VPA++ FGDS VDVGNNN+LL+  K+N+ PYGR+FID +PTGRF +GKL  DF+A+ LGF +Y PA+LS +A+ +N+LIGANFASA SGY   TS+   +ISLT QL YYR YQ+++ ++ GR  +  +    I+I+  GS DFLQNYY  P L
Sbjct:   11 VLLLVSCFFCKSKG------AVVPALIMFGDSIVDVGNNNNLLSIVKSNFLPYGRDFIDQRPTGRFCNGKLAVDFSAEYLGFSSYPPAFLSREASNENILIGANFASASSGYYDATSVPFGSISLTRQLSYYRAYQNRVTRMIGRGNARILFSRGIHILSAGSSDFLQNYYINPLL 180          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.059e-37
Identity = 75/178 (42.13%), Postives = 109/178 (61.24%), Query Frame = 2
Query:    8 TVVFLVL---AFAFASKGYAQEAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKP 532
            T++FL+       FA K         +PAI+ FGDSSVD GNNN++ T  ++N+ PYGR+F+  +PTGRF +GK+ TDF ++ LG K   PAYL       +   G  FASA +GYD  TS +   + L  QL+YY+EYQ+KL    G+ +    I+ ++Y++  G+ DFL+NY+A P
Sbjct:    9 TILFLIAMSSTVTFAGK---------IPAIIVFGDSSVDAGNNNYIPTVARSNFEPYGRDFVGGKPTGRFCNGKIATDFMSEALGLKPIIPAYLDPSYNISDFATGVTFASAATGYDNATSDVLSVLPLWKQLEYYKEYQTKLKAYQGKDRGTETIESSLYLISIGTNDFLENYFAFP 177          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.382e-36
Identity = 71/156 (45.51%), Postives = 103/156 (66.03%), Query Frame = 2
Query:   65 AAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKP 532
            A   +PAI+ FGDSSVD GNNN + T  +AN+ PYGR+F   + TGRF +G+L +DFT++  G K   PAYL       +   G  FASAG+GYD +T+ +   I L  +++Y++EYQS L+   G +++A II++++YIV  G+ DFL+NYY  P
Sbjct:   22 AGAKIPAIIVFGDSSVDSGNNNFISTMARANFEPYGRDFPGGRATGRFCNGRLSSDFTSEAYGLKPTVPAYLDPSYNISDFATGVCFASAGTGYDNSTADVLGVIPLWKEVEYFKEYQSNLSAYLGHRRAAKIIRESLYIVSIGTNDFLENYYTLP 177          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL86_ARATH (GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 8.330e-35
Identity = 79/182 (43.41%), Postives = 110/182 (60.44%), Query Frame = 2
Query:   11 VVFLVLAF-AFASKGYAQEAAPLVP-------AIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKP 532
            ++FL L F +F+S     E A   P       AI+ FGDS+VD GNNN++ T FK N+PPYG +F +  PTGRF +G+LVTDF A  +G K   P YL        L+ G +FASAGSGYD  T  I + I +  QL+Y+REY+ KL    G+++    I++A++ V  G+ DF+ NY+  P
Sbjct:   15 ILFLFLFFISFSSSTSKLEPAKSEPKRKHSVSAILVFGDSTVDPGNNNYIDTVFKCNFPPYGLDFRNKTPTGRFCNGRLVTDFIASYIGVKENVPPYLDPNLGINELISGVSFASAGSGYDPLTPTITNVIDIPTQLEYFREYKRKLEGKMGKQEMEKHIEEAMFCVSAGTNDFVINYFTIP 196          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 8.330e-35
Identity = 70/176 (39.77%), Postives = 107/176 (60.80%), Query Frame = 2
Query:    5 KTVVFLVLAFAFASKGYAQEAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKP 532
            + + FL+LA     K    E     PA++ FGDS+VD GNNN + T  K+N+ PYGR++ D + TGRFS+G++  DF ++ LG K   PAYL       +   G  FASAG+G D  TS +   + L  +++YY+EYQ++L    G +++  II +++Y++  G+ DFL+NYY  P
Sbjct:    5 RVLAFLLLAAQLLVK--IPETCAKFPALIVFGDSTVDSGNNNQISTVLKSNFQPYGRDYFDGKATGRFSNGRIAPDFISEGLGLKNAVPAYLDPAYNIADFATGVCFASAGTGLDNATSAVLSVMPLWKEVEYYKEYQTRLRSYLGEEKANEIISESLYLISIGTNDFLENYYLLP 178          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL85_ARATH (GDSL esterase/lipase At5g45950 OS=Arabidopsis thaliana GN=At5g45950 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.424e-34
Identity = 73/148 (49.32%), Postives = 97/148 (65.54%), Query Frame = 2
Query:   77 VPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNY 520
            V +I+ FGDSSVD GNNN + T  K N+PPYG  FI+H+PTGR  DG L  D+ A+ +G+    PA+L    T  +L  GA+FASAGSGYD  T+ I++  S T Q  Y+  Y+  L KL G  +SA +I +AI+++  GS DFLQNY
Sbjct:   38 VTSILVFGDSSVDPGNNNFIKTEMKGNFPPYGENFINHKPTGRLCDGLLAPDYIAEAMGYPPI-PAFLDPSLTQADLTRGASFASAGSGYDDLTANISNVWSFTTQANYFLHYKIHLTKLVGPLESAKMINNAIFLMSMGSNDFLQNY 184          
The following BLAST results are available for this feature:
BLAST of CX047004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
APG2_ARATH7.247e-5558.66GDSL esterase/lipase APG OS=Arabidopsis thaliana G... [more]
GDL78_ARATH1.729e-4858.64GDSL esterase/lipase At5g22810 OS=Arabidopsis thal... [more]
GDL73_ARATH5.030e-4852.84GDSL esterase/lipase At5g03820 OS=Arabidopsis thal... [more]
GDL72_ARATH1.239e-4652.33GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
GDL59_ARATH1.239e-4652.84GDSL esterase/lipase At3g53100 OS=Arabidopsis thal... [more]
GDL34_ARATH3.059e-3742.13GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL48_ARATH3.382e-3645.51GDSL esterase/lipase At2g42990 OS=Arabidopsis thal... [more]
GDL86_ARATH8.330e-3543.41GDSL esterase/lipase At5g45960 OS=Arabidopsis thal... [more]
GDL66_ARATH8.330e-3539.77GDSL esterase/lipase At4g26790 OS=Arabidopsis thal... [more]
GDL85_ARATH2.424e-3449.32GDSL esterase/lipase At5g45950 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_11E10_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11E10-J20-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047004 ID=CX047004; Name=CX047004; organism=Citrus sinensis; type=EST; length=538bp
CAGGAAAACAGTTGTGTTTTTGGTGCTGGCATTTGCATTTGCAAGCAAAG
GGTACGCACAAGAGGCAGCGCCTCTTGTTCCTGCAATCGTAAGTTTTGGT
GATTCTTCAGTAGATGTTGGCAACAACAATCATCTTCTCACCTATTTCAA
GGCCAATTACCCTCCTTATGGAAGAGAGTTTATCGATCATCAACCTACTG
GAAGATTTTCCGATGGGAAATTAGTCACTGACTTCACTGCTGATACCCTA
GGCTTTAAGACTTATGCGCCTGCATATCTTAGCTCACAAGCTACAGGGAA
AAACCTCCTTATTGGGGCCAACTTTGCTTCAGCTGGATCTGGTTATGATG
GCAATACATCCATCATAAACCATGCAATTTCATTGACTCACCAATTGCAG
TACTATAGAGAGTACCAGAGTAAGCTAGCAAAGTTAGCGGGTCGCAAACA
ATCGGCTTCCATAATCAAGGATGCAATATACATAGTGGGGACTGGGAGTG
GTGACTTTCTTCAAAATTACTATGCCAAACCATCGCTT
back to top