CX046958

Overview
NameCX046958
Unique NameCX046958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length318
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13299 contig Csv1_Contig13299:304..621. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX046958 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.277e-30
Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 3 
Query:    3 AAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPINXXXXXXXXXXTFLYSQAKQ 275
            AAG++ A+SQ+GP F+WWV AQS+FYHLYNQVSYMSLD+ISPLTFSIGNTMKR          FHTP+QP+N          TFLYSQAKQ
Sbjct:  298 AAGWQNAVSQVGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQAKQ 388
[Close]
BLAST of CX046958 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.481e-27
Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 3 
Query:    9 GYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPINXXXXXXXXXXTFLYSQAK 272
            G++TA++ +GPQF+WWV AQS+FYHLYNQVSYMSLD+ISPLTFS+GNTMKR          F TPVQP+N          TFLYSQAK
Sbjct:  300 GWQTALATVGPQFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQAK 387
The following BLAST results are available for this feature:
BLAST of CX046958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GPT2_ARATH9.277e-3064.84Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH1.481e-2762.50Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_11C04_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11C04-F8-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046958 ID=CX046958; Name=CX046958; organism=Citrus sinensis; type=EST; length=318bp
GGGCTGCAGGATATAAAACAGCCATGTCTCAAATTGGACCGCAGTTCATA
TGGTGGGTGGCAGCACAAAGTATTTTCTATCATCTCTACAATCAGGTGTC
TTACATGTCCTTGGACGAGATCTCTCCCTTGACGTTTAGCATTGGAAATA
CAATGAAACGTATATCTGTCATAGTCTCCTCAATCATAATCTTCCACACA
CCTGTCCAACCCATCAACGCTCTTGGAGCTGCAATCGCCATCCTCGGAAC
CTTCTTATATTCCCAGGCAAAGCAGTGAGAATGCTTGGGTTGAACAAGTT
AAGATTCATCGTGTAACA
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