CX046915

Overview
NameCX046915
Unique NameCX046915
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3815 contig Csv1_Contig3815:1..824. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046915 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 474.552 bits (1220), Expect = 3.014e-133
Identity = 219/273 (80.22%), Postives = 245/273 (89.74%), Query Frame = 1
Query:    1 VARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMQPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDP-NWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIXVLSPGFSFAPLGLVNMFNAGGAIEGLKYVVE 816
            VA+NFPDNGCIACMSHNTDALYCSKQ A++RASDDFYPRDP SHTIHIA+VAYNSVFLGE MQPDWDMFHS+HPAAEYH SARAISGGP+YVSD+PGKHNFELL+KLVLPDGS LRARLPGRPTRDCLF+DPARD VSLLKIWNMNKYTGVLGVYNCQGAAW+ TERKN FH+T +D++TG IRGRDVH I+EA+TDP  W GDCA+Y    GELI +PYN ++PVSLK+ EHEIFTV+PI  L  G SFAP+GLVNM+N+GGAIEGL+Y  E
Sbjct:  413 VAKNFPDNGCIACMSHNTDALYCSKQAAVIRASDDFYPRDPVSHTIHIASVAYNSVFLGEFMQPDWDMFHSVHPAAEYHASARAISGGPLYVSDSPGKHNFELLRKLVLPDGSILRARLPGRPTRDCLFADPARDGVSLLKIWNMNKYTGVLGVYNCQGAAWSSTERKNIFHQTKTDSLTGSIRGRDVHSISEASTDPTTWNGDCAVYSQSRGELIVMPYNVSLPVSLKIREHEIFTVSPISHLVDGVSFAPIGLVNMYNSGGAIEGLRYEAE 685          
BLAST of CX046915 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 391.734 bits (1005), Expect = 2.569e-108
Identity = 176/267 (65.92%), Postives = 221/267 (82.77%), Query Frame = 1
Query:    1 VARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMQPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIXVLSPGFSFAPLGLVNMFNAGGAIEGL 801
            +ARNF DNGCI+CM HNTD LY +KQTAIVRASDDFYPRDP SHTIHIA+VAYNS+FLGE MQPDWDMFHSLHP AEYH +ARA+ G  IYVSD PG HNF+LL+KLVLPDGS LRA+LPGRPTRDCLF+DPARD +SLLKIWNMNK+TG++GV+NCQGA W K  +KN  H+T+   +TG IR  D  LI++ A + +W+GD  +Y +R+GE++ LP  A++P++LKVLE+E+F ++P+  ++   SFAP+GLV+MFN+ GAIE +
Sbjct:  415 IARNFTDNGCISCMCHNTDGLYSAKQTAIVRASDDFYPRDPASHTIHIASVAYNSLFLGEFMQPDWDMFHSLHPTAEYHAAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAKLPGRPTRDCLFADPARDGISLLKIWNMNKFTGIVGVFNCQGAGWCKETKKNQIHDTSPGTLTGSIRADDADLISQVAGE-DWSGDSIVYAYRSGEVVRLPKGASIPLTLKVLEYELFHISPLKEITENISFAPIGLVDMFNSSGAIESI 680          
BLAST of CX046915 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 8.850e-101
Identity = 168/273 (61.54%), Postives = 210/273 (76.92%), Query Frame = 1
Query:    1 VARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMQPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIXVLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEG 819
            ++RNFPDNG I+CMSHNTD LY +K+TA++RASDDF+PRDP SHTIHIA+VAYN++FLGE MQPDWDMFHSLHP AEYH +ARA+ G  IYVSD PG+H+F LL+KLVL DGS LRA+LPGRPT DC FSDP RD  SLLKIWN+N++TGV+GV+NCQGA W K E++   H+     I+G +R  DVH + + A    WTGD  +Y H  GEL+ LP + ++PV+L   E+E+FTV P+   S G  FAP+GL+ MFN+GGAI  L+Y  EG
Sbjct:  419 ISRNFPDNGIISCMSHNTDGLYSAKKTAVIRASDDFWPRDPASHTIHIASVAYNTLFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCAIYVSDKPGQHDFNLLRKLVLRDGSILRAKLPGRPTSDCFFSDPVRDNKSLLKIWNLNEFTGVIGVFNCQGAGWCKNEKRYLIHDQEPGTISGCVRTNDVHYLHKVAAF-EWTGDSIVYSHLRGELVYLPKDTSLPVTLMPREYEVFTVVPVKEFSDGSKFAPVGLMEMFNSGGAIVSLRYDDEG 690          
BLAST of CX046915 vs. ExPASy Swiss-Prot
Match: RFS_PEA (Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.064e-57
Identity = 118/280 (42.14%), Postives = 163/280 (58.21%), Query Frame = 1
Query:    1 VARNFPDNGCIACMSHNTDA-LYCSKQTAIVRASDDFYPRDPTSHT--------IHIAAVAYNSVFLGEIMQPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLI-AEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIXVLSPG-FSFAPLGLVNMFNAGGAIEGLKY 807
            V ++F  NG IA M H  D  L  ++  ++ R  DDF+  DP+            H+   AYNS+++G  + PDWDMF S HP AE+H ++RAISGGP+YVSD  G HNF+LLK  VLPDGS LR +    PTRDCLF DP  +  ++LKIWN+NKY GVLG++NCQG  W    R+N      S A+T      D+     +   D       A+Y  +  +L  +  +  + VSL+    E+ TV+P+ V S     FAP+GLVNM N+GGA++ L++
Sbjct:  456 VNKHFKGNGVIASMEHCNDFFLLGTEAISLGRVGDDFWCCDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPVYVSDCVGNHNFKLLKSFVLPDGSILRCQHYALPTRDCLFEDPLHNGKTMLKIWNLNKYAGVLGLFNCQGGGWCPETRRNKSASEFSHAVTCYASPEDIEWCNGKTPMDIKGVDVFAVYFFKEKKLSLMKCSDRLEVSLEPFSFELMTVSPLKVFSKRLIQFAPIGLVNMLNSGGAVQSLEF 735          
BLAST of CX046915 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.084e-56
Identity = 114/282 (40.43%), Postives = 165/282 (58.51%), Query Frame = 1
Query:    1 VARNFPDNGCIACMSHNTDALYCSKQT-AIVRASDDFYPRDPTSHT--------IHIAAVAYNSVFLGEIMQPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTG---DCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIXVL-SPGFSFAPLGLVNMFNAGGAIEGLKY 807
            V ++F  NG IA M H  D ++   +  ++ R  DDF+  DP+            H+   AYNS+++G  +QPDWDMF S HP AE+H ++RAISGGPIY+SD  GKH+F+LLK+LVLP+GS LR      PTRD LF DP  D  ++LKIWN+NKYTGV+G +NCQG  W +  R+N       + +T     +DV     + + P       + A++  ++ +L+    N  + ++L+  + E+ TV+P+  +      FAP+GLVNM N  GAI  L Y
Sbjct:  443 VNKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDCVGKHDFDLLKRLVLPNGSILRCEYYALPTRDRLFEDPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCRETRRNQCFSECVNTLTATTSPKDVEW--NSGSSPISIANVEEFALFLSQSKKLLLSGLNDDLELTLEPFKFELITVSPVVTIEGNSVRFAPIGLVNMLNTSGAIRSLVY 722          
BLAST of CX046915 vs. ExPASy Swiss-Prot
Match: RFS_ORYSJ (Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.672e-56
Identity = 116/286 (40.56%), Postives = 168/286 (58.74%), Query Frame = 1
Query:    1 VARNFPDNGCIACMSHNTD-ALYCSKQTAIVRASDDFYPRDPTSHT--------IHIAAVAYNSVFLGEIMQPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPI-XVLSP--GFSFAPLGLVNMFNAGGAIEGLKYVVEGG 822
            V R+F  NG IA M H  D  L  ++  A+ R  DDF+  DP+            H+   AYNS+++G  + PDWDMF S HP A +H ++RA+SGGP+YVSDA G H+F+LL++L LPDG+ LR      PTRDCLF+DP  D  ++LKIWN+NK++GVLG +NCQG  W++  R+N      S  +T +    DV    E +         A+Y     +L  L  + ++ ++L+   +E+  V P+  ++SP  G  FAP+GL NM NAGGA++G +   + G
Sbjct:  441 VRRHFNGNGVIASMEHCNDFMLLGTEAVALGRVGDDFWCTDPSGDPDGTFWLQGCHMVHCAYNSLWMGAFIHPDWDMFQSTHPCAAFHAASRAVSGGPVYVSDAVGCHDFDLLRRLALPDGTILRCERYALPTRDCLFADPLHDGKTMLKIWNVNKFSGVLGAFNCQGGGWSREARRNMCAAGFSVPVTARASPADV----EWSHGGGGGDRFAVYFVEARKLQLLRRDESVELTLEPFTYELLVVAPVRAIVSPELGIGFAPIGLANMLNAGGAVQGFEAARKDG 722          
BLAST of CX046915 vs. ExPASy Swiss-Prot
Match: STSYN_PEA (Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.611e-52
Identity = 108/284 (38.03%), Postives = 161/284 (56.69%), Query Frame = 1
Query:    1 VARNFPDNGCIACMSHNTDALYC-SKQTAIVRASDDFYPRDPTSHT--------IHIAAVAYNSVFLGEIMQPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDP-NWTGDCAIYCHRTGELITLPYNA-AMPVSLKVLEHEIFTVTPIXVLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEG 819
            + +NF  NG IA M H  D  +  +KQ ++ R  DDF+ +DP            +H+   +YNS+++G+++QPDWDMF S H  A++H  +RAI GGPIYVSD  G H+F+L+KKLV PDG+  +      PTRDCLF +P  D  ++LKIWN NKY GV+G +NCQGA W+   +K          I G +   +V    +  T       +  +Y ++  EL  +   +  +  +++    E+++  P+  L  G  FAP+GL NMFN+GG +  L+YV  G
Sbjct:  511 IVKNFNGNGMIASMQHCNDFFFLGTKQISMGRVGDDFWFQDPNGDPMGSFWLQGVHMIHCSYNSLWMGQMIQPDWDMFQSDHVCAKFHAGSRAICGGPIYVSDNVGSHDFDLIKKLVFPDGTIPKCIYFPLPTRDCLFKNPLFDHTTVLKIWNFNKYGGVIGAFNCQGAGWDPIMQKFRGFPECYKPIPGTVHVTEVEWDQKEETSHLGKAEEYVVYLNQAEELSLMTLKSEPIQFTIQPSTFELYSFVPVTKLCGGIKFAPIGLTNMFNSGGTVIDLEYVGNG 794          
BLAST of CX046915 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 8.692e-48
Identity = 103/282 (36.52%), Postives = 163/282 (57.80%), Query Frame = 1
Query:    7 RNFPDNGCIACMSHNTDALY-CSKQTAIVRASDDFYPRDPTSHT--------IHIAAVAYNSVFLGEIMQPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGK--HNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAE---AATDPNWTGDCAIYCHRTGELITL-PYNAAMPVSLKVLEHEIFTVTPI-XVLSPGFSFAPLGLVNMFNAGGAIEGLK 804
            +NF     IA M    +  +  +KQ +I R  DDF+ +DP            +H+   +YNS+++G+++QPDWDMF S H  AEYH ++RAI GGP+Y+SD  GK  HNF+L+KKL   DG+  R      PTRD LF +P  D+ S+LKI+N NK+ GV+G +NCQGA W+  E +   ++     ++G +   D+        A +   +TGD  +Y  ++ E++ +   + AM ++L+    ++ +  P+  ++S G  F PLGL+NMFN  G ++ +K
Sbjct:  529 KNFNGTDVIASMQQCNEFFFLATKQISIGRVGDDFWWQDPYGDPQGVYWLQGVHMIHCSYNSIWMGQMIQPDWDMFQSDHVCAEYHAASRAICGGPVYLSDHLGKASHNFDLIKKLAFFDGTIPRCVHYALPTRDSLFKNPLFDKESILKIFNFNKFGGVIGTFNCQGAGWSPEEHRFKGYKECYTTVSGTVHVSDIEWDQNPEAAGSQVTYTGDYLVYKQQSEEILFMNSKSEAMKITLEPSAFDLLSFVPVTELVSSGVRFVPLGLINMFNCVGTVQDMK 810          
BLAST of CX046915 vs. ExPASy Swiss-Prot
Match: AGAL_SULSO (Alpha-galactosidase OS=Sulfolobus solfataricus GN=galS PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.871e-20
Identity = 61/148 (41.22%), Postives = 82/148 (55.41%), Query Frame = 1
Query:   31 IACMSHNTDALYCSK-QTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMQPDWDMFHSLHPAAEYHGSARAISGGPIYVSDA-PGKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYN 468
            I CMS N +  YC+   + ++R S D+ P       +HI   AYNS+    I+ PD+DMF S  P A+ H  AR  SGGPIY++D  P + N ELL+  VLP+G  +R   P   T D LF DP R+RV LLK+    K    +  +N
Sbjct:  401 INCMSMNPEN-YCNYFYSNVMRNSIDYVPFWKDGTKLHIMFNAYNSLLTSHIVYPDYDMFMSYDPYAKVHLVARVFSGGPIYITDRHPERTNIELLRMAVLPNGEVIRVDEPALITEDLLFKDPLRERV-LLKLKGKVKGYNAIAFFN 546          
The following BLAST results are available for this feature:
BLAST of CX046915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
RFS6_ARATH3.014e-13380.22Probable galactinol--sucrose galactosyltransferase... [more]
RFS2_ARATH2.569e-10865.92Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH8.850e-10161.54Probable galactinol--sucrose galactosyltransferase... [more]
RFS_PEA2.064e-5742.14Galactinol--sucrose galactosyltransferase OS=Pisum... [more]
RFS5_ARATH5.084e-5640.43Probable galactinol--sucrose galactosyltransferase... [more]
RFS_ORYSJ8.672e-5640.56Galactinol--sucrose galactosyltransferase OS=Oryza... [more]
STSYN_PEA2.611e-5238.03Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 S... [more]
RFS4_ARATH8.692e-4836.52Probable galactinol--sucrose galactosyltransferase... [more]
AGAL_SULSO5.871e-2041.22Alpha-galactosidase OS=Sulfolobus solfataricus GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_11A04_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11A04-B8-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046915 ID=CX046915; Name=CX046915; organism=Citrus sinensis; type=EST; length=824bp
GTTGCCAGGAACTTCCCTGATAATGGGTGCATTGCGTGCATGAGTCACAA
TACTGATGCACTCTACTGCTCAAAACAAACTGCTATAGTGAGAGCATCAG
ATGATTTCTACCCACGTGATCCGACATCACACACCATTCATATTGCAGCT
GTCGCGTACAACAGTGTGTTCTTGGGAGAAATCATGCAGCCTGATTGGGA
CATGTTCCACTCCCTTCATCCAGCTGCTGAGTATCACGGATCGGCCCGTG
CTATAAGTGGTGGGCCCATTTACGTCAGTGATGCGCCCGGGAAACACAAC
TTTGAGCTGCTAAAGAAATTAGTGCTGCCTGATGGGTCAACTCTTCGAGC
ACGCTTGCCTGGGCGGCCCACACGCGATTGCCTCTTCTCGGACCCAGCCC
GTGATCGTGTCAGCTTGTTGAAGATATGGAACATGAACAAGTACACAGGG
GTGCTGGGTGTTTACAATTGCCAAGGAGCGGCTTGGAACAAAACTGAGAG
GAAGAACACGTTCCACGAAACCACAAGTGATGCAATAACAGGGCAAATTA
GGGGCCGTGATGTTCACCTCATTGCTGAAGCTGCCACGGACCCCAATTGG
ACCGGTGACTGCGCCATCTACTGTCACCGGACCGGTGAACTCATCACCCT
GCCGTACAATGCAGCAATGCCAGTGTCCCTTAAAGTCCTTGAACATGAAA
TCTTCACTGTCACACCCATTAANGTTTTATCCCCCGGCTTTAGCTTTGCG
CCCTTGGGGCTCGTCAACATGTTCAATGCTGGTGGTGCTATTGAGGGGCT
CAAATATGTAGTTGAAGGCGGCGC
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