CX046898

Overview
NameCX046898
Unique NameCX046898
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3813 contig Csv1_Contig3813:1..752. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_BRAOL (Asparagine synthetase [glutamine-hydrolyzing] OS=Brassica oleracea PE=2 SV=2)

HSP 1 Score: 303.908 bits (777), Expect = 6.051e-82
Identity = 142/180 (78.89%), Postives = 160/180 (88.89%), Query Frame = -2
Query:  209 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAVKAPPKVIDNIPRMM 748
            LDK+FIN AM++DPE KMI P+EGR+EKW+LR+AFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLKAHA ++V DKMM  A +IFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGA+VACSTAKAVEWDA W+NN+DPSGRAA+GVHLSAY+    A   + AP K ID+IP MM
Sbjct:  400 LDKEFINTAMSLDPESKMIKPEEGRIEKWVLRRAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAENVNDKMMSKAAFIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGATVACSTAKAVEWDASWSNNMDPSGRAAIGVHLSAYDGSKVAL-PLPAPHKAIDDIPMMM 578          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_ARATH (Asparagine synthetase [glutamine-hydrolyzing] OS=Arabidopsis thaliana GN=ASN1 PE=2 SV=2)

HSP 1 Score: 301.597 bits (771), Expect = 3.003e-81
Identity = 143/181 (79.01%), Postives = 160/181 (88.40%), Query Frame = -2
Query:  209 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAVKAPP-KVIDNIPRMM 748
            LDKDFIN AM++DPE KMI P+EGR+EKW+LR+AFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLK HA Q+V DKMM NA +IFPHNTP TKEAYYYRMIFERFFPQNSARLTVPGGA+VACSTAKAVEWDA W+NN+DPSGRAA+GVHLSAY+     + A+  PP K IDN+P MM
Sbjct:  399 LDKDFINTAMSLDPESKMIKPEEGRIEKWVLRRAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKDHAAQNVNDKMMSNAGHIFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGATVACSTAKAVEWDASWSNNMDPSGRAAIGVHLSAYD---GKNVALTIPPLKAIDNMPMMM 576          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_ASPOF (Asparagine synthetase [glutamine-hydrolyzing] OS=Asparagus officinalis PE=2 SV=2)

HSP 1 Score: 295.434 bits (755), Expect = 2.152e-79
Identity = 138/192 (71.88%), Postives = 163/192 (84.90%), Query Frame = -2
Query:  176 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAAS-NAVKAPPKVIDNIPRMMEAAAPGLAITS 748
            LDK+F++VAM+IDPE KMI P  GR+EKW+LRKAFDDEE PYLPKH+LYRQKEQFSDGVGYSWIDGLKAHA +HVTD+MM NA  I+PHNTP TKEAYYYRMIFERFFPQNSAR TVPGG S+ACSTAKA+EWDA W+NNLDPSGRAALGVH SAY+  + +S +A K    + +  PR+++ A PG+ I++
Sbjct:  399 LDKEFMDVAMSIDPESKMIKPDLGRIEKWVLRKAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHVTDRMMLNAARIYPHNTPTTKEAYYYRMIFERFFPQNSARFTVPGGPSIACSTAKAIEWDARWSNNLDPSGRAALGVHDSAYDPPLPSSISAGKGAAMITNKKPRIVDVATPGVVIST 590          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_TRIVS (Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria versicolor GN=AS PE=2 SV=3)

HSP 1 Score: 287.73 bits (735), Expect = 4.488e-77
Identity = 134/164 (81.71%), Postives = 144/164 (87.80%), Query Frame = -2
Query:  257 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASN 748
            LDK+F+N+AM+IDPE KMI P +GR+EKWILRKAFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMM NA +IFPHNTP TKE YYYRMIFERFFPQNSA+LTVPGG SVACSTA AV WDA W+ NLDPSGRAA GVH  AYE  V   N
Sbjct:  399 LDKEFVNLAMSIDPEAKMIKPDQGRIEKWILRKAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMLNAGHIFPHNTPTTKEGYYYRMIFERFFPQNSAKLTVPGGPSVACSTATAVAWDASWSKNLDPSGRAATGVHDLAYENHVPIGN 562          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS1_PEA (Asparagine synthetase, nodule [glutamine-hydrolyzing] OS=Pisum sativum GN=AS1 PE=2 SV=3)

HSP 1 Score: 287.73 bits (735), Expect = 4.488e-77
Identity = 136/176 (77.27%), Postives = 148/176 (84.09%), Query Frame = -2
Query:  221 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAVKAPPKVIDNI 748
            LDKDFI VAM IDPE+KMI   EGR+EKWILRKAFDDEE PYLPKH+LYRQKEQFSDGVGY WIDG+K HA +HVTD+MM NA +IFP NTP TKEAYYYRMIFERFFPQNSARLTVPGG SVACST KA+EWDA W+NNLDPSGRAALGVH+SAYE Q+        P K+I  I
Sbjct:  400 LDKDFIKVAMDIDPEFKMIKHDEGRIEKWILRKAFDDEENPYLPKHILYRQKEQFSDGVGYGWIDGIKDHAAKHVTDRMMFNASHIFPFNTPNTKEAYYYRMIFERFFPQNSARLTVPGGPSVACSTEKAIEWDASWSNNLDPSGRAALGVHVSAYEHQINPVTKGVEPEKIIPKI 575          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS1_LOTJA (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Lotus japonicus GN=AS1 PE=2 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 9.997e-77
Identity = 144/192 (75.00%), Postives = 162/192 (84.38%), Query Frame = -2
Query:  176 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAVKAPPKVIDN-IPRMMEAAAPGLAITS 748
            LDK+FINVAM IDPE+KMI   EGR+EK+ILR+AFDDEE+PYLPKH+LYRQKEQFSDGVGYSWIDGLK HA +HVTDKM+ NA  IF HNTPLTKEAYYYRMIFERFFPQNSARLTVPGG +VACSTAKAVEWDA W+NNLDPSGRAALGVHLSAY+ +   +N +   P   +  IP  MEA + G+AI S
Sbjct:  399 LDKEFINVAMNIDPEYKMIKRDEGRIEKYILRRAFDDEEKPYLPKHILYRQKEQFSDGVGYSWIDGLKDHAAKHVTDKMILNAGNIFRHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGPTVACSTAKAVEWDAAWSNNLDPSGRAALGVHLSAYDDK--QNNLINNKPVEFEKLIP--MEAPSLGVAIHS 586          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS2_PEA (Asparagine synthetase, root [glutamine-hydrolyzing] OS=Pisum sativum GN=AS2 PE=2 SV=3)

HSP 1 Score: 283.108 bits (723), Expect = 1.105e-75
Identity = 145/189 (76.72%), Postives = 155/189 (82.01%), Query Frame = -2
Query:  182 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAVKAPPKVIDNIPRMMEAAAPGLAI 748
            LDK FINVAM IDPE KMI   EGR+EK+ILRKAFDDEE PYLPKH+LYRQKEQFSDGVGYSWIDGLKAHA +HVTDKMM NA  IFPHNTP TKEAYYYRMIFERFFPQNSARLTVPGG +VACSTAKAVEWDA W+NNLDPSGRAALGVH SAYE     +  V+   K+I      +EAA   LAI
Sbjct:  399 LDKAFINVAMNIDPENKMIKRDEGRIEKYILRKAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHVTDKMMLNAGNIFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGPTVACSTAKAVEWDAAWSNNLDPSGRAALGVHDSAYENHNKVNKTVEF-EKIIP-----LEAAPVELAI 581          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS2_LOTJA (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Lotus japonicus GN=AS2 PE=2 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 1.885e-75
Identity = 140/191 (73.30%), Postives = 157/191 (82.20%), Query Frame = -2
Query:  176 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAVKAPPKVIDNIPRMMEAAAPGLAITS 748
            LDK FI+VAM IDPE KMI   EGR+EKW+LRKAFDDEE PYLPKH+LYRQKEQFSDGVGY WIDGLK HA +HVTDKMM NA  I+P NTP TKEAYYYRMIFERFFPQNSARL+VPGGAS+ACST KA+EWDA W+NNLDPSGRAALGVH SAY+ Q+  S +    P+ I  IP+ ME +  G+AI S
Sbjct:  399 LDKKFIDVAMGIDPENKMIKRDEGRIEKWVLRKAFDDEENPYLPKHILYRQKEQFSDGVGYGWIDGLKDHAAKHVTDKMMLNASNIYPFNTPNTKEAYYYRMIFERFFPQNSARLSVPGGASIACSTEKAIEWDAAWSNNLDPSGRAALGVHDSAYDDQLNKSVSKGVEPEKI--IPK-MEVSPLGVAILS 586          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_ORYSJ (Asparagine synthetase [glutamine-hydrolyzing] OS=Oryza sativa subsp. japonica GN=Os06g0265000 PE=2 SV=3)

HSP 1 Score: 278.1 bits (710), Expect = 3.556e-74
Identity = 130/175 (74.29%), Postives = 148/175 (84.57%), Query Frame = -2
Query:  224 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAVKAPPKVIDN 748
            LDK+FINVAM IDPEWKMI    GR+EKW+LR AFDDEE+PYLPKH+LYRQKEQFSDGVGYSWIDGLK HA +HV+D MM NA +++P NTP+TKEAYYYR IFE+FFP+N+ARLTVPGG SVACSTAKAVEWDA W+ NLDPSGRAALGVH +AYE  +  S A   P  V+DN
Sbjct:  399 LDKNFINVAMDIDPEWKMIKRDLGRIEKWVLRNAFDDEEKPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANEHVSDSMMMNASFVYPENTPVTKEAYYYRTIFEKFFPKNAARLTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHDAAYEDTLQKSPASANP--VLDN 571          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_MAIZE (Asparagine synthetase [glutamine-hydrolyzing] OS=Zea mays GN=ASN1 PE=2 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 3.231e-59
Identity = 108/163 (66.26%), Postives = 126/163 (77.30%), Query Frame = -2
Query:  260 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAAS 748
            LDK FI+VAM IDPEW MI    GR+EKW++RKAFDD+E PYLPKH+LYRQKEQFSDGVGY+WIDGLK+  EQ VTD+MM NA  +FP+NTP+ KEAYYYRMIFER FPQ+SAR TVP G S+ACST  A+EW  +W  + DPSGR  +  H SA     A S
Sbjct:  399 LDKSFISVAMDIDPEWNMIKRDLGRIEKWVMRKAFDDDEHPYLPKHILYRQKEQFSDGVGYNWIDGLKSFTEQQVTDEMMNNAAQMFPYNTPVNKEAYYYRMIFERLFPQDSARETVPWGPSIACSTPAAIEWVEQWKASNDPSGR-FISSHDSAATDHTAVS 560          
The following BLAST results are available for this feature:
BLAST of CX046898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ASNS_BRAOL6.051e-8278.89Asparagine synthetase [glutamine-hydrolyzing] OS=B... [more]
ASNS_ARATH3.003e-8179.01Asparagine synthetase [glutamine-hydrolyzing] OS=A... [more]
ASNS_ASPOF2.152e-7971.88Asparagine synthetase [glutamine-hydrolyzing] OS=A... [more]
ASNS_TRIVS4.488e-7781.71Asparagine synthetase [glutamine-hydrolyzing] OS=T... [more]
ASNS1_PEA4.488e-7777.27Asparagine synthetase, nodule [glutamine-hydrolyzi... [more]
ASNS1_LOTJA9.997e-7775.00Asparagine synthetase [glutamine-hydrolyzing] 1 OS... [more]
ASNS2_PEA1.105e-7576.72Asparagine synthetase, root [glutamine-hydrolyzing... [more]
ASNS2_LOTJA1.885e-7573.30Asparagine synthetase [glutamine-hydrolyzing] 2 OS... [more]
ASNS_ORYSJ3.556e-7474.29Asparagine synthetase [glutamine-hydrolyzing] OS=O... [more]
ASNS_MAIZE3.231e-5966.26Asparagine synthetase [glutamine-hydrolyzing] OS=Z... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10H07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10H07-P13-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046898 ID=CX046898; Name=CX046898; organism=Citrus sinensis; type=EST; length=752bp
TTTTACAAGATAATTATGAAGATCACATACATATAAACAACCATATGCAA
TGTTTTCTAACTTGTACACATTGCCAAAAATGAAATTACAATACAGAAGA
ACATATAAAAGATCCATAGATGATATATTTTTCTGTCTTAAGTTCACCCA
CTCTTGGGGGATTCCACAGACACTAGCTAGTGATTGCAAGCCCTGGAGCA
GCAGCTTCCATCATTCGTGGTATGTTATCGATGACCTTTGGTGGTGCCTT
AACAGCATTTGAAGCAGCTACCTGCTTTTCATAAGCTGATAGATGGACTC
CCAGTGCAGCCCTCCCAGAAGGATCAAGATTATTTGCCCACTCAGCATCC
CATTCGACAGCTTTAGCCGTGCTGCATGCTACACTCGCACCTCCTGGGAC
AGTTAGCCTGGCTGAATTCTGTGGAAAGAACCTCTCGAAAATCATTCTGT
AGTAGTAGGCTTCTTTAGTCAAAGGTGTGTTGTGTGGGAAGATGTATTGA
GCATTTTGCATCATCTTATCAGTCACATGTTGTTCAGCATGTGCTTTGAG
GCCATCAATCCAACTATAGCCAACACCATCACTGAATTGTTCCTTCTGTC
TGTACAGAACATGCTTTGGCAGATAGGGACGCTCCTCATCATCGAAGGCC
TTCCTCAGGATCCACTTCTCGAGACGTCCTTCTTGAGGATTAATCATCTT
CCACTCAGGATCTATGGCCATTGCTACATTAATAAAATCTTTGTCAAGGC
CT
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