CX046851

Overview
NameCX046851
Unique NameCX046851
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9358 contig Csv1_Contig9358:304..1092. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046851 vs. ExPASy Swiss-Prot
Match: HDHD3_XENLA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis GN=hdhd3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.053e-15
Identity = 65/203 (32.02%), Postives = 92/203 (45.32%), Query Frame = 1
Query:   16 DAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDG-------RPFWQFIVSSS---TGCSDSQYFE----ELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWL 582
            D   TLL    P+ Q Y    +K G+  +   +   +R AY      SRL + N G       R +W  +V  +   +G  DS   +    +LY  ++T   W L  P A +   +    G+++AV+SNFD RL  +LR    + +FD           KP+  IF KA  L  V P  AVHVGDD  ND   AR  G  ++L
Sbjct:    9 DVKDTLLRVRVPVGQQYYAEAKKRGLCVNPGTLETSFRNAYRSH---SRL-FPNYGLAQGMSSRQWWLDVVLQTFRLSGIEDSDTVQSLAKQLYQDFSTAHNWALV-PGAREALDSCTNLGLRMAVISNFDRRLEELLRQCCLERYFDFVVTAESAGVAKPHLGIFHKALSLAKVPPHQAVHVGDDYVNDYCAARMVGMHSYL 206          
BLAST of CX046851 vs. ExPASy Swiss-Prot
Match: HDHD3_MOUSE (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus GN=Hdhd3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 59/204 (28.92%), Postives = 92/204 (45.10%), Query Frame = 1
Query:    1 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDG---RPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWL 582
            + L  D   TL+   +P+ + Y      +GV   +  +   +R+AY           ++ G   R +W+ +V  +    G  D+Q      ++LY  +++   W + +  AE   K  RK G+KLAVVSNFD RL  +L  L     FD           KP+P IF +A     V+P  A HVGD    D  G++  G  ++L
Sbjct:    8 RLLTWDVKDTLIKLRRPVGEEYASKARAHGVVVEDITVEQAFRQAYRAQSHNFPNYGLSRGLTSRQWWKDVVLHTFRLAGVPDAQAMTPVADQLYEDFSSPFTWQVLEG-AEMTLKGCRKRGLKLAVVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREALQRACVEPAVAAHVGDSYLCDYQGSQAVGMHSFL 210          
BLAST of CX046851 vs. ExPASy Swiss-Prot
Match: HDHD3_BOVIN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus GN=HDHD3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 58/204 (28.43%), Postives = 90/204 (44.12%), Query Frame = 1
Query:    1 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYE---QPWGGSRLRYVNDGRPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWL 582
            + L  D   TLL    P+   Y      +G+      +   +++AY+   Q +    L +      +W  +V  +    G  D+Q      E+LY  +++   W + +  AE   +  RK G+KLAVVSNFD RL  +L  +     FD           KP+P IF +A  L  V+P    H+GD  + D  GAR  G  ++L
Sbjct:    8 RLLTWDVKDTLLRLRHPVGVEYATKARAHGLEVEATALGQAFKQAYKAQSQSFPNYGLGHGLTSHQWWLDLVQQTFHQAGVRDAQAVAPIAEQLYKDFSSPSTWQVLEG-AEATLRGCRKRGLKLAVVSNFDRRLEDILEGVGLREHFDFVLTSEAAGWPKPDPRIFHEALHLAQVEPAVGAHIGDSYQRDYKGARAVGMHSFL 210          
BLAST of CX046851 vs. ExPASy Swiss-Prot
Match: HDHD3_HUMAN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Homo sapiens GN=HDHD3 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 58/204 (28.43%), Postives = 89/204 (43.63%), Query Frame = 1
Query:    1 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYE---QPWGGSRLRYVNDGRPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWL 582
            + L  D   TLL    P+ + Y      +G+    + +   +R+AY      +    L +    R +W  +V  +    G  D+Q      E+LY  ++    W + D  AE   +  R  G++LAV+SNFD RL  +L  L     FD           KP+P IF +A  L  ++P  A HVGD+   D  G R  G  ++L
Sbjct:    8 RLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDG-AEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFL 210          
BLAST of CX046851 vs. ExPASy Swiss-Prot
Match: NANP_RAT (N-acylneuraminate-9-phosphatase OS=Rattus norvegicus GN=Nanp PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 41/133 (30.83%), Postives = 64/133 (48.12%), Query Frame = 1
Query:  193 WQFIVSSSTGCSDSQYF-EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRL-RPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLW 585
            W+  +  + G +D++   EE Y  + + +  H+   E  K      +  V+L +++N D +  R  + A  C  +FD           KP P+IF   CDLLGV+P D V VGD    D+ G  +AG  A +W
Sbjct:   76 WEEAIQETKGGADNRKLAEECYFLWKSTRLQHMTLEEDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVVGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVW 208          
BLAST of CX046851 vs. ExPASy Swiss-Prot
Match: YFP5_SCHPO (Putative uncharacterized hydrolase C7D4.05 OS=Schizosaccharomyces pombe GN=SPAC7D4.05 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.637e-11
Identity = 51/194 (26.29%), Postives = 92/194 (47.42%), Query Frame = 1
Query:    1 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDGRPFWQFIVSSSTGCS-DSQYFEELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIF----LKACDLLG--VKPEDAVHVGDDRRNDVWGARD 561
            K +  DA GT+L  S+P+  +Y E+ +KYGV  +  EI +   + + +       +   +   +W  ++  S      ++  EEL++Y++ +  + +     + + +   +    + ++SN D R+R VL     DH  D           KP+  IF     KA  LLG  ++PE+ +H+GDD   DV  AR+
Sbjct:   11 KLVTFDAFGTILHLSKPVPIVYSEVAQKYGVHATIDEIEHNTFKDFSEKHKNHGKKSGLNPHDWWIKVIEHSFPTPVPAEMAEELWSYFSKKTGYTIHPLLIDFLKRNKEERKYIIGIISNTDERIRTVLEDYGIDHLIDIYAFSYDVGFEKPSREIFDYAMEKAVKLLGQEIQPEECMHLGDDLIKDVSAARN 204          
BLAST of CX046851 vs. ExPASy Swiss-Prot
Match: REG2_DROME (Rhythmically expressed gene 2 protein OS=Drosophila melanogaster GN=Reg-2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.056e-11
Identity = 53/208 (25.48%), Postives = 90/208 (43.27%), Query Frame = 1
Query:    1 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEIL-----NRYRRAYEQPWGGSRLRYVNDGRPFWQFIVSSSTGCSDSQYFEE-LYNY-------YTTEKAWHLCDPEAE---KVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACD---LLGVKPEDAVHVGDDRRNDVWGARDAG 567
            + +  D   TLL       + Y EIG  +G      E+      N Y+   + P  G       + + +W+ +++ +   S +   +E L+N+       Y T   W  C+   E   ++ K ++    KL V++NFD RL  +L+    D + D           KP+P IF KA +   L  +KPE+ +H+GD    D   A++ G
Sbjct:    8 RLITFDVTNTLLQFRTTPGKQYGEIGALFGARCDNNELAKNFKANWYKMNRDYPNFGRDTNPQMEWQQWWRKLIAGTFAESGAAIPDEKLHNFSNHLIELYKTSICWQPCNGSVELLQQLRKELKPEKCKLGVIANFDPRLPTLLQNTKLDQYLDFAINSYEVQAEKPDPQIFQKAMEKSGLKNLKPEECLHIGDGPTTDYLAAKELG 215          
BLAST of CX046851 vs. ExPASy Swiss-Prot
Match: NANP_MOUSE (N-acylneuraminate-9-phosphatase OS=Mus musculus GN=Nanp PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.056e-11
Identity = 40/133 (30.08%), Postives = 64/133 (48.12%), Query Frame = 1
Query:  193 WQFIVSSSTGCSDSQYF-EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRL-RPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLW 585
            W+  +  + G +D++   EE Y  + + +  H+   +  K      +  V+L +++N D +  R  + A  C  +FD           KP P+IF   CDLLGV+P D V VGD    D+ G  +AG  A +W
Sbjct:   76 WEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVW 208          
The following BLAST results are available for this feature:
BLAST of CX046851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
HDHD3_XENLA4.053e-1532.02Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_MOUSE1.540e-1428.92Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_BOVIN1.540e-1428.43Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_HUMAN2.224e-1328.43Haloacid dehalogenase-like hydrolase domain-contai... [more]
NANP_RAT2.718e-1130.83N-acylneuraminate-9-phosphatase OS=Rattus norvegic... [more]
YFP5_SCHPO4.637e-1126.29Putative uncharacterized hydrolase C7D4.05 OS=Schi... [more]
REG2_DROME6.056e-1125.48Rhythmically expressed gene 2 protein OS=Drosophil... [more]
NANP_MOUSE6.056e-1130.08N-acylneuraminate-9-phosphatase OS=Mus musculus GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_10F05_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10F05-L9-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046851 ID=CX046851; Name=CX046851; organism=Citrus sinensis; type=EST; length=789bp
AAAGCTTTGCTCGTTGACGCTGCTGGTACTCTCCTTGTTCCTTCTCAGCC
CATGGCCCAGATATATAGAGAGATTGGAGAGAAGTATGGTGTTGCCTACT
CTGAGGCGGAGATATTGAACAGATACAGAAGGGCTTATGAGCAGCCATGG
GGAGGATCTCGTCTCAGATATGTGAATGATGGGAGACCCTTCTGGCAATT
TATAGTTAGTTCGTCTACTGGTTGTTCAGATTCCCAGTATTTTGAAGAAC
TATATAACTACTATACCACTGAAAAGGCATGGCACCTCTGTGATCCTGAA
GCTGAAAAGGTATTTAAGGCTATCAGAAAAGCAGGAGTCAAATTGGCTGT
TGTGTCAAACTTTGATACTCGGTTAAGACCTGTGTTGCGAGCTCTAAATT
GTGATCATTGGTTCGATGCTGTTGCAGTGTCAGCTGAAGTTGAAGCAGAG
AAGCCAAATCCAACAATATTCCTAAAAGCTTGTGATTTGTTGGGAGTAAA
ACCTGAGGATGCTGTACATGTAGGGGATGATCGTAGGAATGATGTGTGGG
GTGCCAGGGATGCAGGTTGTGATGCTTGGCTTTGGGGAAGTGATGTCCAC
TCCTTTAAGGAGGTTGCTCAAAGGATAGGGGTCAAAGTTTAAGAGAAGGC
CGATCTTAACCGACCGCTCAGAAGAATGCTTTATGTACAGGTTTGTTTTA
GCTTTTGGTGAGAGATCTGTGTATATTCTGCATCGGACGGATGTGGGAAC
AGACTAGATAGGACTGGTTGTAGGAAGACAAACTTCAGC
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