CX046848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2M_ARATH (NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana GN=ND2 PE=2 SV=2) HSP 1 Score: 353.599 bits (906), Expect = 5.234e-97 Identity = 182/196 (92.86%), Postives = 187/196 (95.41%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIG 621 I+ + +MWAPDIYEGSPTPVTAFLSIAPKISI ANI RVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLA+SSIGHVGYI GFSCGTIEGIQSLLIGIFIYALMT+DAFAIVLALRQTRVKYIADLGALAKTNPI AITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLA VGVVTSVIG Sbjct: 241 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYALMTMDAFAIVLALRQTRVKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLALVGVVTSVIG 436
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2M_OENBE (NADH-ubiquinone oxidoreductase chain 2 OS=Oenothera bertiana GN=ND2 PE=2 SV=2) HSP 1 Score: 350.517 bits (898), Expect = 4.431e-96 Identity = 180/196 (91.84%), Postives = 186/196 (94.90%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIG 621 I+ + +MWAPDIYEGSPTPVTAFLSIAPKISI ANI RVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLA+SSIGHVGYI GFSCGTIEGIQSLLIG+FIYAL TI+AFAIVLALRQTRVKYIADLGALAKTNPI AITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLA VGVVTSVIG Sbjct: 230 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGLFIYALTTINAFAIVLALRQTRVKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIG 425
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2M_MARPO (NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia polymorpha GN=ND2 PE=3 SV=2) HSP 1 Score: 316.62 bits (810), Expect = 7.090e-86 Identity = 161/195 (82.56%), Postives = 172/195 (88.21%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 I+ + +MWAPD+YEGSPT VTAF SIAPKISI AN+ RVFIY Y T QQ+FFFCSIASMILGALAAMAQ KVKRLLA+SSIGHVGY+ GFSCGTIEGIQSLLIGIFIY LMT++ FAIVLALRQ R KYIADLGALAKTNPI AIT SITMFSYAGIPPLAGFCSKFYLFFAALGCGAY LA +GVVTSVI Sbjct: 231 ITAVPFHMWAPDVYEGSPTIVTAFFSIAPKISILANMLRVFIYSFYDPTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLLIGFSCGTIEGIQSLLIGIFIYVLMTVNVFAIVLALRQNRFKYIADLGALAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVI 425
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2M_BETVU (NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris GN=ND2 PE=3 SV=2) HSP 1 Score: 290.041 bits (741), Expect = 7.107e-78 Identity = 159/204 (77.94%), Postives = 165/204 (80.88%), Query Frame = 1 Query: 52 YMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTI---EGIQSLLIGIFIYALMTIDAFAIVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRVS 654 YMWAPDIYEGSPTPVTAF SIAP+ SISANI RVFIYGSYGATLQQIFFFCSIA + A + K A SSIG + Y F + EGIQSLLIG+FIYA M FAIV ALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIG WAAGRLPRVS Sbjct: 217 YMWAPDIYEGSPTPVTAFFSIAPERSISANILRVFIYGSYGATLQQIFFFCSIALRLRSTGAMANEGK-----ASSSIGQLDYGGLYFVLVLMWNREGIQSLLIGLFIYASMDDRCFAIVSALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGCWAAGRLPRVS 415
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUON_RHORT (NADH-quinone oxidoreductase subunit N OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=nuoN PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.634e-48 Identity = 94/203 (46.31%), Postives = 137/203 (67.49%), Query Frame = 1 Query: 22 LSGSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFI--YGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQ--TRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 L+ +S + +MWAPD+YEG+PTPVTAF ++APKI+ +RV + + +Y QQ+ SI SM+LG AA+ QT +KRL+A+SSIGHVGY G + GT EG++ +L+ + IY M + F ++LA+RQ V+ I DL L+K +P+ A ++ MFS AG+PPLAGF KFY+F AA+ G + LA +GV++SV+ Sbjct: 218 LAFKVSAVPFHMWAPDVYEGAPTPVTAFFAVAPKIAALTLFARVMMGPFAAYADQWQQVIILISILSMLLGGFAAIVQTNIKRLMAYSSIGHVGYALIGIAAGTTEGVRGVLVYLAIYLFMNVGTFTVILAMRQKGRAVEGINDLAGLSKQHPMMAAAMAVFMFSMAGVPPLAGFFGKFYVFMAAVNSGLFALAVIGVLSSVV 420
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUON_AZOC5 (NADH-quinone oxidoreductase subunit N OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=nuoN PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.912e-47 Identity = 99/210 (47.14%), Postives = 139/210 (66.19%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGAT--LQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQ--TRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV 651 +S + +MW PD+YEG+PTPVTAF + APK++ A RV + T QQI F SIASM LGA AA+ Q +KRLLA+SSIGH+G+ G + GT +G+ +L+ + IY +MT+ +F VLA+R+ V+ I DL LA+T P+ A+ + MFS AGIPPLAGF +K+Y+F AA+ G Y LA +GVV SV+G + R+ ++ Sbjct: 217 VSAVPFHMWTPDVYEGAPTPVTAFFATAPKVAAMAVFVRVAVEALPHVTHSWQQIVTFVSIASMALGAFAAIGQRNIKRLLAYSSIGHMGFALVGLAAGTEQGVTGVLLYMAIYVVMTLGSFTCVLAMRRDGRSVETIEDLAGLARTKPLMALALAALMFSLAGIPPLAGFVAKYYVFLAAIQAGLYGLAVIGVVASVVGAYYYLRVVKI 426
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUON_MAGSA (NADH-quinone oxidoreductase subunit N OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=nuoN PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.488e-47 Identity = 95/214 (44.39%), Postives = 143/214 (66.82%), Query Frame = 1 Query: 22 LSGSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFI--YGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQ--TRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV 651 LS +S + +MWAPD+YEG+PTPVT+F ++APKI+ + RV + +Q+ F +I SM +G+ AA+ QT +KRL+A+SSIGHVG++ G + G+ GIQ +LI + IY M + AFA++L++RQ V+ I DL L+KT+P+ A ++ MFS AG+PPLAGF KFY+F AA+ G Y L+ +GV++SV+ + R+ +V Sbjct: 219 LSFKVSAVPFHMWAPDVYEGAPTPVTSFFAVAPKIAALCLLVRVMTGPFADLVEQWRQVVTFIAIGSMFVGSFAAVVQTNIKRLMAYSSIGHVGFVLVGIAAGSTLGIQGVLIYLAIYLFMNVGAFAVILSMRQKGRMVEGIDDLAGLSKTHPMMAFVMAVLMFSMAGVPPLAGFWGKFYVFMAAIESGLYTLSILGVLSSVVSTYYYLRIVKV 432
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUON_METNO (NADH-quinone oxidoreductase subunit N OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=nuoN PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.220e-46 Identity = 98/210 (46.67%), Postives = 141/210 (67.14%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYG--ATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQTRVKY--IADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV 651 ++ + +MW PD+YEG+PTPVTAF + APK++ A RVFI G A QQI F +IASM LG+ AA+ Q +KRL+A+SSIG+VGY G + GT EG++ +++ + IY MT+ AFA++L +R+ + I DL L++T+P A ++ MFS AGIPPLAGF +KFY+F AA+ G LA +GVVTSV+G + R+ ++ Sbjct: 223 LAAVPFHMWTPDVYEGAPTPVTAFFASAPKMAAMAMTVRVFIGAFPGVVAEWQQIIVFIAIASMALGSFAAIGQRNLKRLMAYSSIGNVGYALIGLAAGTEEGVRGVVVYMAIYLAMTLGAFAVILGMRRGNRMFETIEDLSGLSRTHPWLAFCLAMMMFSLAGIPPLAGFFAKFYVFAAAIKAGLNVLAVIGVVTSVVGAYYYVRIVKI 432
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUON_PARL1 (NADH-quinone oxidoreductase subunit N OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=nuoN PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.492e-46 Identity = 95/214 (44.39%), Postives = 141/214 (65.89%), Query Frame = 1 Query: 22 LSGSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFI--YGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQTR--VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV 651 L+ IS + +MW PD+YEG+PTPVTAF + APK++ A I RV + S + QQI F +IASM+LGA AA+ Q+ +KRL+A+SSI H+G+ G + GT EG++ +LI + IY +M F +LA+++ V+ I+DL L++ P+ A ++ MFS AG+PPLAGF KFY+F AA+ G Y LA +GV+ SV+G + R+ ++ Sbjct: 218 LAFKISAVPFHMWTPDVYEGAPTPVTAFFAGAPKVAAMALILRVLFVAFPSMESEWQQIIVFIAIASMVLGAFAAIGQSNIKRLMAYSSISHMGFAMVGLAAGTPEGVRGVLIYLVIYVVMNAGVFCCILAMQRKEGYVENISDLAGLSRNQPMVAFMMAMLMFSLAGVPPLAGFFGKFYVFMAAVEAGLYPLAVIGVLASVVGAFYYLRIVKI 431
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUON_RHOCS (NADH-quinone oxidoreductase subunit N OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=nuoN PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.368e-46 Identity = 92/214 (42.99%), Postives = 142/214 (66.36%), Query Frame = 1 Query: 22 LSGSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFI--YGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQT--RVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV 651 L+ IS + +MW PD+YEG+PT VTAF ++APK++ A RV + +G A QQ+ +F ++ASM+LG+LAA+ Q +KR++A+SSIGH+GY G + GT EG++ +LI + IY M + FA++L++R V+ I DL L++++P+ A+ + MFS G+PP+AGF K Y+F AA+ Y LA +GV+TSVI + R+ +V Sbjct: 215 LAFKISAVPFHMWTPDVYEGAPTSVTAFFAVAPKVAALALFVRVLVDPFGELLAQWQQVVWFSAVASMLLGSLAAIQQRNIKRMMAYSSIGHIGYALVGLAAGTEEGVRGVLIYLAIYLAMNVGTFAVILSMRVNGRMVENIDDLSGLSRSHPMMALAMAFFMFSLGGVPPMAGFFGKLYVFMAAIEAQLYVLAVIGVLTSVISLFYYLRIVKV 428 The following BLAST results are available for this feature:
BLAST of CX046848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046848 ID=CX046848; Name=CX046848; organism=Citrus sinensis; type=EST; length=656bpback to top |