DN618444

Overview
NameDN618444
Unique NameDN618444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618444 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.068e-70
Identity = 138/154 (89.61%), Postives = 145/154 (94.16%), Query Frame = -1
Query:  189 DDPTLISKQQLLQRIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMD-GSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENRV 647
            DDPTLIS+QQL  RIVGGLGGRAAEE+IFG PEVTTGAAGDLQQITGLAKQMV TFGMS+IGPWSLMD G+QSGDVIMRMMARNSMSEKLAEDID AVKRLSD AYEIALSQIR+NREA+DKIVEVLLEKET+SGDEFRAILSEF EIP ENRV
Sbjct:  513 DDPTLISRQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITGLAKQMVVTFGMSDIGPWSLMDSGAQSGDVIMRMMARNSMSEKLAEDIDTAVKRLSDEAYEIALSQIRSNREAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVENRV 666          
BLAST of DN618444 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.435e-69
Identity = 135/153 (88.24%), Postives = 139/153 (90.85%), Query Frame = -1
Query:  189 DDPTLISKQQLLQRIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENRV 647
            DDPTLISKQQL  RIVGGLGGRAAEEVIFG  EVTTGA  DLQQITGLAKQMVTTFGMSEIGPWSLMD S+  DVIMRMMARNSMSEKLA DID AVK LSD+AYEIALSQIRNNREA+DKIVE+LLEKETMSGDEFRAILSEF EIP ENRV
Sbjct:  519 DDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQITGLAKQMVTTFGMSEIGPWSLMDSSEQSDVIMRMMARNSMSEKLANDIDTAVKTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSEFTEIPPENRV 671          
BLAST of DN618444 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.443e-67
Identity = 130/153 (84.97%), Postives = 139/153 (90.85%), Query Frame = -1
Query:  189 DDPTLISKQQLLQRIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENRV 647
            DDPTLISKQQL  RIVGGLGGRAAEE+IFG  EVTTGA GDLQQITGLA+QMVTTFGMS+IGPWSLMD S   DVIMRMMARNSMSEKLAEDID+AVK+LSD AYEIALS I+NNREA+DK+VEVLLEKET+ GDEFRAILSEF EIP ENRV
Sbjct:  526 DDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLARQMVTTFGMSDIGPWSLMDSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAILSEFTEIPPENRV 678          
BLAST of DN618444 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 7.430e-56
Identity = 106/149 (71.14%), Postives = 130/149 (87.25%), Query Frame = -1
Query:  204 DDPTLISKQQLLQRIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGS-QSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIP 647
            +DPTL+SKQQL  RIVGGLGGRAAE+VIFG PE+TTGAAGDLQQ+T +A+QMVT FGMSEIGPW+L D + +  DV++RM+ARNSMSEKLAEDID+ VK++   AYE+A   +RNNREAIDK+V+VLLEKET++GDEFRAILSE+ + P
Sbjct:  523 EDPTLVSKQQLFARIVGGLGGRAAEDVIFGEPEITTGAAGDLQQVTEIARQMVTMFGMSEIGPWALTDPAVKQNDVVLRMLARNSMSEKLAEDIDSCVKKIIGDAYEVAKKHVRNNREAIDKLVDVLLEKETLTGDEFRAILSEYTDQP 671          
BLAST of DN618444 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 5.887e-53
Identity = 101/153 (66.01%), Postives = 129/153 (84.31%), Query Frame = -1
Query:  192 DDPTLISKQQLLQRIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMD-GSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENR 647
            +DP L+S+QQ+   IVGGLGGRAAEEV+FG PEVTTGAAGDLQQ+T +A++MVT FGMSEIGPW+L +  +Q GDV++RM+AR+SMSE+LA DIDAAV+ + D AYE+A + +R NR AID++V+VL+EKET+ GDEFRAILSE V+I  E R
Sbjct:  522 EDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGAAGDLQQVTRVARRMVTAFGMSEIGPWALAEPAAQGGDVVLRMLARSSMSERLAADIDAAVRTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAILSEHVDIGKERR 674          
BLAST of DN618444 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.233e-34
Identity = 72/155 (46.45%), Postives = 113/155 (72.90%), Query Frame = -1
Query:  189 DDPTLISKQQLLQRIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIM--RMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENRV 647
            ++  L +K QL+ RI G +GGRAAEE +FG  EVTTGA GDLQQ+T +A+QMVT FGMS +GP SL   S  G+V +   +M R+  SE++A  IDA V++L+++ +++A   ++  RE +D++V++L+EKET+ G+EFR I++E+ E+P + ++
Sbjct:  471 EEQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQMVTRFGMSNLGPISL--ESSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIVAEYAEVPVKEQL 623          
BLAST of DN618444 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.611e-34
Identity = 79/153 (51.63%), Postives = 107/153 (69.93%), Query Frame = -1
Query:  195 DDPTLISKQQLLQRIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIM--RMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAEN 647
            DD +LIS+ Q+L RIVG LGGRAAEE+IFG  EVTTGA+ DLQQ+T +A+QMVT FGMS+IGP SL   SQ GD  +   M   +  S+++A +ID  V+ +    Y  A   I +NR  ID++V++L+EKET+ G+EFR I+ E+  IP +N
Sbjct:  472 DDQSLISRSQILARIVGALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSKIGPLSL--ESQGGDPFLGRGMGGGSEYSDEVATNIDKQVREIVSECYAQAKHIIIDNRVVIDRLVDLLIEKETIEGNEFRDIVKEYTAIPEKN 622          
BLAST of DN618444 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.747e-34
Identity = 73/151 (48.34%), Postives = 105/151 (69.54%), Query Frame = -1
Query:  195 DDPTLISKQQLLQRIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAEN 647
            DD +LIS+ Q+L RIVG LGGRAAEE+IFG  EVTTGA+ DLQQ+T +A+QMVT FGMS+IGP SL        +   M   +  S+++A +ID  V+ +    Y+ A   +++NR  +D++V++L+EKET+ G+EFR I+ E+  IP +N
Sbjct:  472 DDQSLISRSQILARIVGALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSKIGPLSLESQGSDPFLGRGMGGGSEYSDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEFRHIVKEYTAIPEKN 622          
BLAST of DN618444 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.747e-34
Identity = 79/153 (51.63%), Postives = 107/153 (69.93%), Query Frame = -1
Query:  195 DDPTLISKQQLLQRIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIM--RMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAEN 647
            +D +L+S+  LL RI+  LGGRAAE+VIFG PEVTTGA+ DLQQ+T LA+QMVT FGMS IGP +L D S +G V +   M + +  +E +A+ ID  V+++    YE A+  + +NR  ID IVE LL+KETM GDEFR +LS +  +P +N
Sbjct:  485 EDQSLLSRSALLARIITTLGGRAAEQVIFGEPEVTTGASSDLQQVTNLARQMVTRFGMSNIGPLALEDES-TGQVFLGGNMASGSEYAENIADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFRELLSTYTILPNKN 636          
BLAST of DN618444 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.588e-34
Identity = 76/149 (51.01%), Postives = 103/149 (69.13%), Query Frame = -1
Query:  204 DDPTLISKQQLLQRIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSM-SEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIP 647
            +D +LIS+ Q+L RI+G LGGRAAEEV+FG PEVTTGA  DLQQ+T +A+QMVT FGMS IGP SL +   S   + R M  +S  SE +A  ID  V+ +    +   +  I++NR  IDK+V++L+EKET+ GDEFR I+ +F  +P
Sbjct:  472 EDQSLISRSQILARIMGALGGRAAEEVVFGLPEVTTGAGNDLQQVTSMARQMVTRFGMSNIGPLSL-ESQNSDPFLGRTMGSSSQYSEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIVGDFTSLP 619          
The following BLAST results are available for this feature:
BLAST of DN618444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
FTSH2_ORYSJ1.068e-7089.61Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH8_ARATH3.435e-6988.24Cell division protease ftsH homolog 8, chloroplast... [more]
FTSH2_ARATH1.443e-6784.97Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH6_ARATH7.430e-5671.14Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH6_ORYSJ5.887e-5366.01Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH1_SYNY31.233e-3446.45Cell division protease ftsH homolog 1 OS=Synechocy... [more]
FSTH_PORYE1.611e-3451.63Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH_PORPU2.747e-3448.34Cell division protease ftsH homolog OS=Porphyra pu... [more]
FTSH_ODOSI2.747e-3451.63Cell division protease ftsH homolog OS=Odontella s... [more]
FTSH_GUITH3.588e-3451.01Cell division protease ftsH homolog OS=Guillardia ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02J07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002J07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618444 ID=DN618444; Name=DN618444; organism=Citrus sinensis; type=EST; length=647bp
GCAAAACTTTAGAAATTTACTCAATCATGACTTTTTGAGTTAGTGTACAA
TCCTACTTACATTTGATCAAGAATACAGAGTATTATACATTCAAGTGTAT
GCGTTCAAAGAGTGGCTGAAATTTCAAGTATGGATAATATTAATGCCACT
CAAACAGATACAGATAATGGTGCTGGAACAGCTGGAGGGACCCTATTTTC
AGCTGGGATTTCGACAAACTCTGAGAGGATTGCCCGGAATTCATCCCCTG
ACATTGTTTCCTTCTCAAGAAGAACTTCCACGATCTTGTCAATGGCTTCA
CGGTTGTTCCTTATTTGGCTCAACGCAATCTCATAGGCACGGTCTGATAG
TCTCTTGACTGCAGCATCAATGTCTTCAGCAAGCTTCTCAGACATTGAGT
TCCTTGCCATCATTCTCATGATGACATCACCACTCTGTGATCCGTCCATG
AGCGACCATGGGCCAATTTCAGACATTCCAAATGTGGTTACCATCTGTTT
GGCCAAACCAGTGATCTGCTGCAAATCACCAGCTGCTCCTGTTGTCACTT
CAGGCCCTCCAAAAATCACTTCCTCAGCAGCTCTACCACCGAGTCCACCA
ACAATTCTTTGCAAGAGCTGCTGCTTCGATATCAGGGTGGGGTCATC
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