CX046836

Overview
NameCX046836
Unique NameCX046836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig868 contig Csv1_Contig868:113..863. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046836 vs. ExPASy Swiss-Prot
Match: PPA29_ARATH (Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.859e-53
Identity = 96/131 (73.28%), Postives = 105/131 (80.15%), Query Frame = -3
Query:  360 YFHIPLPEFAYFDQSNFT-GVRQEGISFASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKT 749
            YFHIPLPEF  FD  N T GVRQEG S AS NSGFFTT++A GDVK+VF GHDHVNDFCG L G+ LCYGGGFGYHAYGKAGWERRARVVV  L K  K  WG VKSIKTWKRLDD+HL+ +D  VLW+ +
Sbjct:  252 YFHIPLPEFLSFDSKNATKGVRQEGTSAASTNSGFFTTLIARGDVKSVFVGHDHVNDFCGELKGLNLCYGGGFGYHAYGKAGWERRARVVVVDLNKKRKGKWGAVKSIKTWKRLDDKHLSVIDSQVLWNNS 382          
BLAST of CX046836 vs. ExPASy Swiss-Prot
Match: PPA14_ARATH (Probable inactive purple acid phosphatase 14 OS=Arabidopsis thaliana GN=PAP14 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41
Identity = 78/130 (60.00%), Postives = 93/130 (71.54%), Query Frame = -3
Query:  363 YFHIPLPEFAYFDQSN-FTGVRQEGISFASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSK 749
            Y HIP+PEFA F++S   TGVRQE      +NSGFFT +V  G+VK VF+GHDHVNDFC  L GI LCY GG GYH YG+ GW RR RVV A LEKT    WG V +IKTWKRLDD++ + +D  +LW+K
Sbjct:  254 YLHIPMPEFALFNKSTEMTGVRQESTCSPPINSGFFTKLVERGEVKGVFSGHDHVNDFCAELHGINLCYAGGAGYHGYGQVGWARRVRVVEAQLEKTMYGRWGAVDTIKTWKRLDDKNHSLIDTQLLWTK 383          
BLAST of CX046836 vs. ExPASy Swiss-Prot
Match: PPA28_ARATH (Probable inactive purple acid phosphatase 28 OS=Arabidopsis thaliana GN=PAP28 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.450e-35
Identity = 71/135 (52.59%), Postives = 90/135 (66.67%), Query Frame = -3
Query:  345 YFHIPLPEFAYFDQSNFTGVRQEGISFASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTFSGMR 749
            +FHIP+ E      + F G  QEG++ + V SG   T V+ G+VKA F GHDHVNDFCG L G+  CYGGGFGYHAYG+  W RRARV+ A L K  +  W  +K IKTWKRLDDE+L+ +D  VLW  + S ++
Sbjct:  264 FFHIPILEVRELWYTPFIGQFQEGVACSIVQSGVLQTFVSMGNVKAAFMGHDHVNDFCGTLKGVWFCYGGGFGYHAYGRPNWHRRARVIEAKLGK-GRDTWEGIKLIKTWKRLDDEYLSKIDEQVLWETSDSFLK 397          
The following BLAST results are available for this feature:
BLAST of CX046836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PPA29_ARATH5.859e-5373.28Probable inactive purple acid phosphatase 29 OS=Ar... [more]
PPA14_ARATH6.719e-4160.00Probable inactive purple acid phosphatase 14 OS=Ar... [more]
PPA28_ARATH1.450e-3552.59Probable inactive purple acid phosphatase 28 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_10E06_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10E06-J11-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046836 ID=CX046836; Name=CX046836; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAACTACAATCACATCTTTATTCATCCAAAAGCT
CGGGGCAAAAGCTCTGGGAGCAAAACAAAATTTTCTCATCCTACCGGGAG
CAAAACAAAATTTTCTCATCCTAACCTTGTTCTCTGCTTTTTCTTCCAAG
GTATATTACATCACTGTCGTTTCAAAAATGTGTATAACACATTCAACTCC
TAAACAACAATGCCATTGACAGTATTGCCACTGAACCATACTCAAAATAA
CATATTTCCTACAGCCAGGTCGCCGGTTCCAAGTCCACATAAAAAACACA
GGTCCCGCTTGAATCACTCAAGCACCATTAGTGTGTTTCCTTCTGCGCAT
ACCTGAAAAGGTCTTACTCCAAAGGACATGACCATCAACACCAGTTAGGT
GTTCATCATCAAGGCGCTTCCATGTTTTGATTGACTTGACATCTCCCCAG
CCTCTCTTCTCTGTTTTCTCCAAACTGGCTACAACCACCCTTGCCCTCCT
CTCCCATCCAGCCTTTCCATAGGCATGGTATCCAAAACCCCCACCATAAC
AAAGTTGTATACCAGTAAGCCGGCCACAAAAATCATTGACATGATCATGG
CCTGTGAAAACAGCCTTCACATCCCCTGCTGCAACCATGGTTGTGAAGAA
GCCTGAGTTCACAGAAGCAAAGCTTATGCCTTCTTGCCTCACACCTGTGA
AGTTTGATTGATCAAAATATGCAAATTCAGGCAATGGGATGTGAAAGTAA
A
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