DN618440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618440 vs. ExPASy Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 4.977e-58 Identity = 103/117 (88.03%), Postives = 111/117 (94.87%), Query Frame = -1 Query: 236 NGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMKA 586 NGYHHRTEMNKKVYK+GK GQESH TEFDRTEKDITPMGGFPHYG+VK DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK+KFIDTSSKFGHGRFQTT EKQ+++G++KA Sbjct: 273 NGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389
BLAST of DN618440 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4) HSP 1 Score: 208.764 bits (530), Expect = 1.657e-53 Identity = 95/114 (83.33%), Postives = 108/114 (94.74%), Query Frame = -1 Query: 245 NGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGR 586 NGYHHRTEMNKKVY++GK GQE+H+ +TE+DRTEKDITPMGGFPHYGIVK+DYLMIKGCCVGPKKRVVTLRQ+LLKQTSRLA+EEIK+KFID +S GHGRFQT+QEK K+YGR Sbjct: 273 NGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQEKAKFYGR 386
BLAST of DN618440 vs. ExPASy Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5) HSP 1 Score: 207.223 bits (526), Expect = 4.821e-53 Identity = 94/115 (81.74%), Postives = 107/115 (93.04%), Query Frame = -1 Query: 242 NGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRM 586 NGYHHRTE+NKK+Y+LGK G E+HT +TE+DRTEKD+TPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLL QTSRLALEEIK+KFIDT+S FGHGRFQT+ EK ++Y R+ Sbjct: 273 NGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSLEKMRFYNRV 387
BLAST of DN618440 vs. ExPASy Swiss-Prot
Match: RL3_TOXCA (60S ribosomal protein L3 OS=Toxocara canis GN=RPL3 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.966e-38 Identity = 74/128 (57.81%), Postives = 96/128 (75.00%), Query Frame = -1 Query: 209 GYHHRTEMNKKVYKLGKG---GQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMKA*LYAKKSRV 583 GYHHRTE+NKK+Y+LGK + G T++D TEK + PMGGFPHYG+V D++MI+GCCVG KKR +TLR+SL+ QT R A E+I +K+IDTSSKFGHGRFQT EK+ + G++K L A+ V Sbjct: 273 GYHHRTEVNKKIYRLGKSCLTEEGKKNGGTDYDITEKSVNPMGGFPHYGLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFGHGRFQTHAEKRAFMGKLKKDLIAESEAV 400
BLAST of DN618440 vs. ExPASy Swiss-Prot
Match: RL3_DROME (60S ribosomal protein L3 OS=Drosophila melanogaster GN=RpL3 PE=1 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 2.568e-38 Identity = 73/121 (60.33%), Postives = 92/121 (76.03%), Query Frame = -1 Query: 239 GYHHRTEMNKKVYKLGKGGQES------HTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 583 GYHHRTE+NKK+Y++G G + TE+D T+K ITPMGGFPHYG V +D++MIKGCC+G KKR++TLR+SLLK T R ALE+IK+KFIDTSSK GHGRFQT +K + G +K Sbjct: 273 GYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
BLAST of DN618440 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 6.326e-37 Identity = 71/120 (59.17%), Postives = 91/120 (75.83%), Query Frame = -1 Query: 236 GYHHRTEMNKKVYKLGKG----GQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMKA 583 GYHHR E NKK+Y++G+ G++ TG TEFD TEK I PMGGF HYG+VK ++LM+KGC GP+KR +TLR+S+ QT R ALE+I +KFIDTSSKFGHG QT ++K KY+G K+ Sbjct: 274 GYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTKYFGVKKS 393
BLAST of DN618440 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.840e-36 Identity = 72/116 (62.07%), Postives = 89/116 (76.72%), Query Frame = -1 Query: 239 NGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 586 NGYHHRT +N KVY++GKGG E + TEFDRT+K ITPMGGF HYG V +D++M+KG G +KRVVTLR+SL TSR ALEE+ +K+IDT+SKFG GRFQT EK + G +K Sbjct: 271 NGYHHRTSINHKVYRIGKGGDEGNAA-TEFDRTKKTITPMGGFVHYGAVNNDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKHAFMGTLK 385
BLAST of DN618440 vs. ExPASy Swiss-Prot
Match: RL3L_BOVIN (60S ribosomal protein L3-like OS=Bos taurus GN=RPL3L PE=2 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 5.355e-36 Identity = 72/128 (56.25%), Postives = 93/128 (72.66%), Query Frame = -1 Query: 218 GYHHRTEMNKKVYKLGKGGQES------HTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMKA*LYAKK 583 GYHHRTE+NKK+Y++G+G + T +D T+K ITP+GGFPHYG V +D++M+KGC G KKRV+TLR+SLL SR ALE I++KFIDT+SKFGHGRFQT QEK+ + G K L +K Sbjct: 273 GYHHRTELNKKIYRIGRGLHMEDGKVVKNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQKKHLEKEK 400
BLAST of DN618440 vs. ExPASy Swiss-Prot
Match: RL3_CAEEL (60S ribosomal protein L3 OS=Caenorhabditis elegans GN=rpl-3 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 9.134e-36 Identity = 68/118 (57.63%), Postives = 92/118 (77.97%), Query Frame = -1 Query: 239 GYHHRTEMNKKVYKLGKGG---QESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 583 G+HHRT +N K+Y++GK + + G TEFD T+K ITPMGGFP YGIV DY+M++G +GPKKR++TLR+SL+ QT R+A E+I +K+IDTSSK GHGRFQTT EK+ + G++K Sbjct: 273 GFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
BLAST of DN618440 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 147.517 bits (371), Expect = 4.533e-35 Identity = 68/115 (59.13%), Postives = 89/115 (77.39%), Query Frame = -1 Query: 239 GYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 583 GYH RT +N K+Y++GKG E++ G T FDRT+K ITPMGGF HYG +K+D++M+KGC G +KR+VTLR+SL TSR ALEE+ +K+IDT+SKFG GRFQT EK + G +K Sbjct: 271 GYHSRTSINHKIYRVGKGDDEAN-GATSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384 The following BLAST results are available for this feature:
BLAST of DN618440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618440 ID=DN618440; Name=DN618440; organism=Citrus sinensis; type=EST; length=586bpback to top |