DN618439
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: RH28_ARATH (DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana GN=RH28 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.228e-54 Identity = 109/167 (65.27%), Postives = 128/167 (76.65%), Query Frame = 1 Query: 157 QSPWDFAAYSESVSDEHFRRRTTSVDFKITKSLQQRSVPIVDN----------DHSDSELDQHEDYKPEDED--DFSNAGDT-KSFFAPADGASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRI 618 QSPWDFA+YS SV +EH RR TTS+D KI+K++Q R VPI N D SD+E D+ E+Y ED++ ++ T K FF+ DG SFHA++FMELNLSRPLLRACE LGY KPTPIQAACIPLALTGRD+C SAITGSGKTAAFALPTLERLL+RPKR+ Sbjct: 70 QSPWDFASYSSSVGEEHARRHTTSIDEKISKAIQHRPVPISINEEEEEEEEEEDASDAETDKQEEYLSEDDEAAEYKPEDATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRV 236
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: RH28_ORYSJ (DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica GN=Os12g0481100 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.402e-40 Identity = 83/116 (71.55%), Postives = 93/116 (80.17%), Query Frame = 1 Query: 280 DNDHSDSELDQHEDYKPEDEDDF-SNAGDTKSFFAPADGASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRIPA 624 D + + E E + E+E D S D FFA ++GASFHANSF+ELNLSRPLLRACEALGY KPTPIQAACIPLALTGRDICGSAITGSGKTAAF+LP LERLL+RPKR+PA Sbjct: 150 DGEEEEKEEGDEEAAEEEEETDKKSGVVDPSKFFASSEGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPA 265
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_NEOFI (ATP-dependent RNA helicase drs1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=drs1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.078e-24 Identity = 57/114 (50.00%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 289 HSDSELDQHEDYKPEDEDDFSNAGDTKSFFAPAD---GASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRIP 621 H D E E+ + E E D A K+FFAP + AS SF + NLSRP+LR ++ ++ PTPIQ IP+AL G+DI GSA+TGSGKTAAF +P LERLL+RP+++P Sbjct: 256 HPDDEAASDEESEAESEVDAEEAEKRKAFFAPEEKSTAASTSNRSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVP 369
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_ASPFU (ATP-dependent RNA helicase drs1 OS=Aspergillus fumigatus GN=drs1 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.137e-24 Identity = 56/114 (49.12%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 289 HSDSELDQHEDYKPEDEDDFSNAGDTKSFFAPAD---GASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRIP 621 H D E E+ + E E D A K+FFAP + S SF + NLSRP+LR ++ ++ PTPIQ IP+AL G+DI GSA+TGSGKTAAF +P LERLL+RP+++P Sbjct: 267 HPDDEAASDEESEAESEVDAEEAEKRKAFFAPEEKSTAVSTFNRSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVP 380
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_GIBZE (ATP-dependent RNA helicase DRS1 OS=Gibberella zeae GN=DRS1 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.352e-24 Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 1 Query: 256 QQRSVPIVDNDHSDSELDQHEDYKPEDEDDFSNAGDT----------KSFFAPAD----GASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRIP 621 Q+ V + D+D + S+ D +DD S+A D K+FFAP + A+SF ++LSRP++R ++G++KPTPIQA IP+AL G+D+ G A TGSGKT AF LP LERLLYRPK+IP Sbjct: 191 QESGVEVEDDDEAASDNDSVATPTNHPDDDASDASDDEEDAEEEAKRKAFFAPEEENNPDKKATASSFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILPILERLLYRPKKIP 326
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_CHAGB (ATP-dependent RNA helicase DRS1 OS=Chaetomium globosum GN=DRS1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23 Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 280 DNDHSDSELDQHEDYKPEDED--DFSNAGDTKSFFAPAD-----GASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRIP 621 DND + + +D ED+D D K FFA + G +SF ++LSRP+LR ++G++KPTPIQA IP+AL G+D+ G A+TGSGKTAAF +P LERLLYRPK++P Sbjct: 226 DNDSVATPVQHPDDEASEDDDEEDAEEEARRKEFFAAPEETENVGKKGGLSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVP 346
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_BOTFB (ATP-dependent RNA helicase drs1 OS=Botryotinia fuckeliana (strain B05.10) GN=drs1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.557e-23 Identity = 54/116 (46.55%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 289 HSDSELDQHEDYKPEDEDDFSNAGDTKSFFAPAD----GASFHANS-FMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRIP 621 H D + D + +DD A ++FFAP + GA N+ F ++LSRP+LR +G+++PTPIQ+ IP+AL G+D+ G A+TGSGKTAAF +P LERLLYRPK++P Sbjct: 223 HPDDAASEASDEDEDMDDDPEEAAKREAFFAPEEKPVKGAKQELNTTFQSMSLSRPILRGLATVGFTQPTPIQSKTIPVALLGKDVVGGAVTGSGKTAAFVVPVLERLLYRPKKVP 338
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_NEUCR (ATP-dependent RNA helicase drs-1 OS=Neurospora crassa GN=drs-1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.656e-23 Identity = 54/121 (44.63%), Postives = 79/121 (65.29%), Query Frame = 1 Query: 280 DNDHSDSELDQHEDYKPEDED---DFSNAGDTKSFFAPADG----ASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRIP 621 D+D + ++ +D + D++ D K FFAP + +SF E++LSRP+LR ++G++KPTPIQA IP++L G+D+ G A+TGSGKTAAF +P LERLLYRPK++P Sbjct: 243 DDDSVATAVEHPDDVQSSDDEEGIDEEEEAKMKEFFAPEEENQPKKKGEMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVP 363
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_MAGGR (ATP-dependent RNA helicase DRS1 OS=Magnaporthe grisea GN=DRS1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.656e-23 Identity = 54/109 (49.54%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 307 DQHEDYKPEDEDDFSNAGDTKSFFAPADGASFHAN----SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRIP 621 D ++ + E ++D A K FFA AD N SF ++LSRP+LR ++G++KPTPIQ+ IP+AL G+D+ G A+TGSGKTAAF +P LERLLYRPK++P Sbjct: 218 DDDQESESEQDEDEEEAAKMKEFFA-ADEPKSDTNKGNASFQSMSLSRPILRGLTSVGFAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVP 325
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_ASPCL (ATP-dependent RNA helicase drs1 OS=Aspergillus clavatus GN=drs1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.656e-23 Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 289 HSDSELDQHEDYKPEDEDDFSNAGDTKSFFAPADGASFHANS---FMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRIP 621 H D E+ ++ E E D A K+FFAP + + S F + NLSRP+LR ++ ++ PTPIQ IP+AL G+DI GSA+TGSGKTAAF +P LERLL+RP+++P Sbjct: 263 HPDDEVASDDESGAESEVDAEEAEKRKAFFAPEEKTTEEPTSKRSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVP 376 The following BLAST results are available for this feature:
BLAST of DN618439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618439 ID=DN618439; Name=DN618439; organism=Citrus sinensis; type=EST; length=624bpback to top |