DN618437

Overview
NameDN618437
Unique NameDN618437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618437 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.082e-51
Identity = 108/198 (54.55%), Postives = 139/198 (70.20%), Query Frame = 1
Query:   31 MERSSSAVMAGLQPNSLICPFASSRNGCTLF-LPIPNSFSSAAGQSRHCLPPLSLKLQKQTAFTPYHVNQTDSPFKLFSVSSHTLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATV 621
            MERS  AV +G   N ++C   ++ +   L  L    +F S++ + RHC  P+S         + + V++     +  +VSS T   +  +LA+IDWD + FG  PTDYMY MKC RDG FS+G+LQ FGNI+++P++GVLNYGQGLFEGLKAYRKQDGNILLFRPEENA+RM+ GAERMCMPSP+VEQFVEAVK TV
Sbjct:    1 MERS--AVASGFHRNYILCASRAATSTTRLHSLSSLRNFPSSSLRIRHCPSPIS---------SNFIVSEVSRNRRCDAVSSST--TDVTELAEIDWDKIDFGLKPTDYMYAMKCSRDGEFSQGQLQPFGNIDINPAAGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQFVEAVKTTV 185          
BLAST of DN618437 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.252e-49
Identity = 110/199 (55.28%), Postives = 134/199 (67.34%), Query Frame = 1
Query:   31 MERSSSAVMAGLQPNSLICPFASSRNGCTLFLPIPNSFSSAAGQS-RHCLPPLSLKLQKQTAFTPYHVNQTDSPFKLFSVSSHTLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDG-NILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATV 621
            MER+  A++  +  N L+CP                +FS+    S R+  PP    ++ Q + +    N   S  +  +VSS++ S    +LADIDWD +GFG  P DYMYVMKC  DG FSKGELQRFGNIE+SPS+GVLNYGQGLFEGLKAYRK+DG NILLFRPEENA RM+ GAERMCMP+P+VEQFVEAV  TV
Sbjct:    1 MERA--AILPSVNQNYLLCP--------------SRAFSTRLHSSTRNLSPPSFASIKLQHSSSSVSSNGGISLTRCNAVSSNSSSTLVTELADIDWDTVGFGLKPADYMYVMKCNIDGEFSKGELQRFGNIEISPSAGVLNYGQGLFEGLKAYRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETV 183          
BLAST of DN618437 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.132e-41
Identity = 74/105 (70.48%), Postives = 91/105 (86.67%), Query Frame = 1
Query:  304 ADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKAT 618
            AD+DWDNLGFG  P DYMYVMKC +DG F++GEL  +GNI+LSPS+GVLNYGQ ++EG KAYRK++G +LLFRP+ NA+RM++GAERM MPSPSV+QFV AVK T
Sbjct:   54 ADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQT 158          
BLAST of DN618437 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.090e-40
Identity = 79/152 (51.97%), Postives = 101/152 (66.45%), Query Frame = 1
Query:  166 RHCLPPLSLKLQKQTAFTPYHVNQTDSPFKLFSVSSHTLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATV 621
            R CLP  S      +    + ++ T +   +          E  + AD+DWDNLGF    TD+M+  K  RDGNF +G L R+GNIEL+P++G+LNYGQGL EG+KAYR +DG +LLFRPE NAMRM++GAERMCM SPSV QF+E VK TV
Sbjct:    4 RRCLPQYSTTSSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDNLGFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTV 155          
BLAST of DN618437 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 7.877e-36
Identity = 68/106 (64.15%), Postives = 84/106 (79.25%), Query Frame = 1
Query:  304 ADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATV 621
            A++ WD LGF   PTDYMYV KC +  +FS GE+  +G+I +SP +G+LNYGQGLFEGLKAYR +DG I LFRP++NA+RMQ GA+R+CM  PS EQFVEAVK TV
Sbjct:   22 ANVKWDELGFALVPTDYMYVAKCKQGESFSTGEIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTV 127          
BLAST of DN618437 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.659e-33
Identity = 64/115 (55.65%), Postives = 86/115 (74.78%), Query Frame = 1
Query:  277 TLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATV 621
            T S    + A++ W+ LGF   P DYMYV KC +  +F++G++  +G+I +SP S +LNYGQGLFEGLKAYR +D  I +FRP++NA+RMQ GAER+CM  P++EQFVEAVK TV
Sbjct:   10 TTSETDEKYANVKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLFEGLKAYRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTV 124          
BLAST of DN618437 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.439e-29
Identity = 56/103 (54.37%), Postives = 78/103 (75.73%), Query Frame = 1
Query:  304 ADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVK 612
            A++ W+ L F F  TDYMYV KC    +F +G++  F +++L+P + VL YGQGL+EGLKAYR +DG ILLFRP++N +R+Q GA+R+ MP PSV+QFV A+K
Sbjct:   18 ANVKWEELAFKFVRTDYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQYGQGLYEGLKAYRTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIK 120          
BLAST of DN618437 vs. ExPASy Swiss-Prot
Match: ILVE_HELPJ (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.348e-21
Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 1
Query:  301 LADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEA 606
            L ++DW NLGF +  TD+ ++    ++G++S+GEL     ++LS  S VL+YGQ  FEGLKAYR Q G  LLFRP ENA R+Q   ER+ MP  S E F++A
Sbjct:    4 LENLDWKNLGFSYIKTDFRFIATY-KNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKA 104          
BLAST of DN618437 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.639e-20
Identity = 49/107 (45.79%), Postives = 67/107 (62.62%), Query Frame = 1
Query:  301 LADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATV 621
            + D+DW+NLGF +  TDY ++    +DG + +G+L     + +   S  L+YGQ  FEGLKAYR +DG+I LFRP+ NA RMQ  A+R+ MP    E FV A K  V
Sbjct:    1 MKDLDWNNLGFSYIKTDYRFIAHW-KDGKWDEGKLTTDSTLHIHEGSTALHYGQQCFEGLKAYRCKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVV 106          
BLAST of DN618437 vs. ExPASy Swiss-Prot
Match: ILVE_HELPY (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.059e-20
Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 1
Query:  301 LADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATV 621
            L ++DW NLGF +  TD+ ++    ++G++S+G L     ++LS  S VL+YGQ  FEGLKAYR Q G  LLFRP ENA R+Q   ER+ MP  S E F+ A    V
Sbjct:    4 LENLDWKNLGFSYIKTDFRFIATY-KNGSWSQGGLVSENMLQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVV 109          
The following BLAST results are available for this feature:
BLAST of DN618437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
BCAT5_ARATH5.082e-5154.55Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT3_ARATH1.252e-4955.28Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT2_ARATH8.132e-4170.48Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT1_ARATH3.090e-4051.97Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT7_ARATH7.877e-3664.15Putative branched-chain-amino-acid aminotransferas... [more]
BCAT6_ARATH3.659e-3355.65Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT4_ARATH1.439e-2954.37Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_HELPJ9.348e-2149.02Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HAEIN4.639e-2045.79Branched-chain-amino-acid aminotransferase OS=Haem... [more]
ILVE_HELPY6.059e-2046.73Branched-chain-amino-acid aminotransferase OS=Heli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02J03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002J03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618437 ID=DN618437; Name=DN618437; organism=Citrus sinensis; type=EST; length=622bp
CAGGAACCCAGCTTCCACAGAGAAGGAGATATGGAGAGAAGCAGCAGCGC
AGTAATGGCTGGCCTTCAGCCGAATAGCCTAATCTGTCCTTTCGCTTCTT
CACGTAATGGTTGTACGCTCTTCCTCCCCATTCCCAATTCCTTCTCCTCC
GCCGCCGGACAAAGCCGTCATTGCCTTCCTCCCTTATCTCTCAAGCTTCA
AAAGCAAACTGCTTTCACTCCTTACCATGTGAACCAAACGGACTCTCCTT
TCAAGCTTTTTTCCGTTTCATCTCATACTCTCAGCAATGAAACGATTCAA
TTAGCCGACATAGATTGGGACAACCTTGGATTTGGGTTTTGTCCTACTGA
TTATATGTACGTCATGAAATGTGGAAGAGATGGAAACTTCTCTAAAGGTG
AATTACAGCGTTTTGGTAACATTGAGTTGAGTCCATCCTCTGGAGTCTTA
AATTATGGCCAGGGATTATTCGAAGGCCTGAAAGCCTACAGGAAACAAGA
TGGTAACATTCTTCTCTTTCGTCCTGAGGAAAATGCAATGCGGATGCAGG
TGGGTGCGGAGCGGATGTGCATGCCATCACCATCAGTTGAACAGTTTGTG
GAAGCTGTTAAGGCTACTGTTT
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