DN618436

Overview
NameDN618436
Unique NameDN618436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618436 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.108e-45
Identity = 93/123 (75.61%), Postives = 102/123 (82.93%), Query Frame = -1
Query:  256 RYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS 624
            RYLEEVSSCNIF+VK NVISTP IKGTILPGITRKS+IDVA++QGFQ           L+ADEVFCTGTAVVVSPVGS+TY GKRVSYGEG FG VS+QLY+VLT LQMGLI D M WT+ LS
Sbjct:  291 RYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSMIDVARTQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSVTYKGKRVSYGEGTFGTVSKQLYTVLTSLQMGLIEDNMKWTVNLS 413          
BLAST of DN618436 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.941e-43
Identity = 88/123 (71.54%), Postives = 100/123 (81.30%), Query Frame = -1
Query:  256 RYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS 624
            RYLEEVSSCNIF+VK NVISTP IKGTILPGITRKSII+VA+SQGF+           ++ADEVFCTGTAVV+SPVGSITY  +R SYGE GFG VS+QLY+ LT LQMGL  D MNWT++LS
Sbjct:  293 RYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSIIEVARSQGFKVEERNVTVDELVEADEVFCTGTAVVLSPVGSITYKSQRFSYGEDGFGTVSKQLYTSLTSLQMGLSEDNMNWTVQLS 415          
BLAST of DN618436 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.315e-30
Identity = 68/123 (55.28%), Postives = 85/123 (69.11%), Query Frame = -1
Query:  256 RYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS 624
            +YLEE SSCN+FVVKG  ISTP   GTIL GITRKS++++A  QG+Q           +DADEVFCTGTAVVV+PVG+ITY  KRV Y + G  +V Q+L SVL  +Q GLI D   W  +++
Sbjct:  267 KYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEY-KTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388          
BLAST of DN618436 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.960e-27
Identity = 59/122 (48.36%), Postives = 86/122 (70.49%), Query Frame = -1
Query:  259 RYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLEL 624
            R +EE+++CNIF+VKGN++STP   GTILPG+TRKSI ++A   G+Q           L+A+EVFCTGTAVVV  V ++T+  K+V Y   G  A+S +L+S+LT +QMG++ DK  W +++
Sbjct:  231 RNIEELTACNIFIVKGNIVSTPPTSGTILPGVTRKSISELAHDIGYQVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKY-RTGEAALSTKLHSMLTNIQMGVVEDKKGWMVDI 351          
BLAST of DN618436 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.754e-27
Identity = 59/120 (49.17%), Postives = 84/120 (70.00%), Query Frame = -1
Query:  259 LEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLEL 618
            +EEVS+CNIF++KGN++STP   GTILPGITRKSI ++A+  G++           L+A+EVFCTGTAVV+  V ++T+  KRV Y   G  A S +L+ +LT +QMG++ DK  W +E+
Sbjct:  236 IEEVSTCNIFILKGNIVSTPPTSGTILPGITRKSICELARDIGYEVQERDLSVDELLEAEEVFCTGTAVVIKAVETVTFHDKRVKY-RTGEEAFSTKLHLILTNIQMGVVEDKKGWMMEI 354          
BLAST of DN618436 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 6.989e-24
Identity = 59/121 (48.76%), Postives = 78/121 (64.46%), Query Frame = -1
Query:  256 LEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS 618
            +EEVS+ NIF+VKGN I TP   GTIL GITRKSII++A   G++            +A+EVFCTGTA  V+ VGSIT+   R  Y + G G V+QQL S+L  +Q G I D  +W L+++
Sbjct:  265 IEEVSAANIFLVKGNTIVTPATSGTILGGITRKSIIEIALDLGYKVEERSVPVEELKEAEEVFCTGTAAGVASVGSITFKNTRTEY-KVGDGIVTQQLRSILVGIQTGSIQDTKDWVLQIA 384          
BLAST of DN618436 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.457e-21
Identity = 47/120 (39.17%), Postives = 77/120 (64.17%), Query Frame = -1
Query:  259 LEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLEL 618
            +EE+ + N+F++KGNV+STP I GTILPG+TR  ++++ +  G+Q           LDADE FCTGTA +V+ + S+T+  K+  + + G   ++ +LY  L+ +Q G + D   WT+E+
Sbjct:  232 IEELFAANVFMLKGNVVSTPTIAGTILPGVTRNCVMELCRDFGYQVEERTIPLVDFLDADEAFCTGTASIVTSIASVTFKDKKTGF-KTGEETLAAKLYETLSDIQTGRVEDTKGWTVEI 350          
BLAST of DN618436 vs. ExPASy Swiss-Prot
Match: ILVE_STAES (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ilvE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.183e-19
Identity = 49/128 (38.28%), Postives = 73/128 (57.03%), Query Frame = -1
Query:  259 RYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLEL 624
            +Y+EEV S NIF V+   + TP + G+ILPGITRKSII +A+  G++            +A       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY   T +Q G + DK  W +E+
Sbjct:  228 KYVEEVGSMNIFFVENGKVVTPALNGSILPGITRKSIIQLAEDLGYEVEERRVSIEELFNAYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNEPGKITQKLYDTYTGIQSGKLEDKYGWRVEV 355          
BLAST of DN618436 vs. ExPASy Swiss-Prot
Match: ILVE_STAEQ (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ilvE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.183e-19
Identity = 49/128 (38.28%), Postives = 73/128 (57.03%), Query Frame = -1
Query:  259 RYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLEL 624
            +Y+EEV S NIF V+   + TP + G+ILPGITRKSII +A+  G++            +A       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY   T +Q G + DK  W +E+
Sbjct:  228 KYVEEVGSMNIFFVENGKVVTPALNGSILPGITRKSIIQLAEDLGYEVEERRVSIEELFNAYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNEPGKITQKLYDTYTGIQSGKLEDKYGWRVEV 355          
BLAST of DN618436 vs. ExPASy Swiss-Prot
Match: ILVE_STAAW (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MW2) GN=ilvE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.841e-19
Identity = 48/124 (38.71%), Postives = 73/124 (58.87%), Query Frame = -1
Query:  271 RYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNW 624
            +Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++            ++       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY V T +Q G + DK  W
Sbjct:  228 KYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGW 351          
The following BLAST results are available for this feature:
BLAST of DN618436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
BCAT3_ARATH1.108e-4575.61Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT5_ARATH3.941e-4371.54Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT2_ARATH1.315e-3055.28Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT6_ARATH3.960e-2748.36Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT7_ARATH6.754e-2749.17Putative branched-chain-amino-acid aminotransferas... [more]
BCAT1_ARATH6.989e-2448.76Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT4_ARATH1.457e-2139.17Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAES5.183e-1938.28Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAEQ5.183e-1938.28Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAW8.841e-1938.71Probable branched-chain-amino-acid aminotransferas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02J03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002J03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618436 ID=DN618436; Name=DN618436; organism=Citrus sinensis; type=EST; length=624bp
CCCCTGTTTTTTTTTTTTTTTTAGCCAAATGGGATGCGGGATGTACTAAG
TGGAACATACCCAGCAACAAATATTTCTCATAGTAACTTGAGAACAAATT
TGAATATCAAACATAAAGAAGGCAGCAAACTAAAGAAATCTGAGTCACCA
CCGTATATTTAGACCCGCCAACAGCTCAGTCCAAGGATCAGTGAACCTAT
GAGAGATGGACAGATTTGAAATGCAAACCAGAACCAGTAACTTAACCATG
ATCTAGCTGAGCTCAAGGGTCCAATTCATCTTGTCCGCTATAAGACCCAT
CTGTAGTTGGGTAAGCACGGAATATAATTGCTGTGACACCGCACCGAAAC
CACCCTCCCCGTAGGATACCCTTTTACCAAGATAAGTGATGCTTCCCACA
GGAGATACAACAACAGCTGTACCAGTACAAAAAACTTCATCAGCATCAAG
TAACTCCTCCACTGTCACAAGGCGTTCCTCAACCTGGAACCCTTGGCTTT
GAGCAACATCAATTATACTCTTTCTTGTAATGCCAGGTAAGATAGTTCCT
TTTATCACAGGAGTGGATATAACATTGCCCTTCACGACAAAAATGTTGCA
AGAGGAAACCTCTTCCAGGTATCT
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