DN618433

Overview
NameDN618433
Unique NameDN618433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_GEOSF (Flavoprotein wrbA OS=Geobacter sp. (strain FRC-32) GN=wrbA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.461e-28
Identity = 68/141 (48.23%), Postives = 83/141 (58.87%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV +VYYSMYGH+ ++AE I +GA  V G E  L +VPETL  +VL KM A       S +PI T +ELAEAD  +FG PTRFG M  Q + FLDATGGLW    L GK   +F              L+  T L+HHGM+
Sbjct:    2 KVLVVYYSMYGHIHRMAEAIVEGAKEVVGAEVVLRRVPETLSHDVLEKMGAVEAQRSMSHIPICTVDELAEADAVIFGSPTRFGNMCGQMRQFLDATGGLWVKGSLIGKVGSVFASSNTQHGGQESTILSFHTTLLHHGMV 142          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: P25_SCHPO (P25 protein OS=Schizosaccharomyces pombe GN=obr1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.909e-28
Identity = 67/139 (48.20%), Postives = 83/139 (59.71%), Query Frame = 1
Query:  109 ATKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            A  V IV YS YGHV KLAE  K G     G +A ++Q PETL  E+L KM A PK + P++T + L + D F+FG+PTR+G   AQF+ F D+TGGLW    L GK  G F+            ALTA+T  VHHGMI
Sbjct:    4 ANTVAIVIYSTYGHVVKLAEAEKAGIEKAGG-KAVIYQFPETLSPEILEKMHAAPKPNYPVVTLDVLTQYDAFLFGYPTRYGTPPAQFRTFWDSTGGLWVQGALHGKYFGQFFSTGTLGGGQESTALTAMTSFVHHGMI 141          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: ALTA7_ALTAL (Minor allergen Alt a 7 OS=Alternaria alternata GN=ALTA7 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.493e-28
Identity = 70/142 (49.30%), Postives = 88/142 (61.97%), Query Frame = 1
Query:  106 MATKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK-SDVPIIT-PNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            MA K+ IVYYSMYGH++K+A+   KG     G +AKL+QV ETLP+EVL KM APPK S VP++  P  L E DG +FG PTR+G   AQFK F D TG  W+     GK AG+F             A+T+++ LV HG I
Sbjct:    1 MAPKIAIVYYSMYGHIKKMADAELKGIQEAGG-DAKLFQVAETLPQEVLDKMYAPPKDSSVPVLEDPAVLEEFDGILFGIPTRYGNFPAQFKTFWDKTGKQWQQGAFWGKYAGVFVSTGTLGGGQETTAITSMSTLVDHGFI 141          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_GEOSL (Flavoprotein wrbA OS=Geobacter sulfurreducens GN=wrbA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.256e-28
Identity = 68/140 (48.57%), Postives = 84/140 (60.00%), Query Frame = 1
Query:  118 VYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSA--PPKS--DVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            V IVYYSMYGH+ ++AE + +G   V G EA L +VPETL  +VL KM A  P K+   +P+ T +ELA AD  +FG PTRFG M  Q + FLDATGGLW    L GK AG+F              LT  T L+H GM+
Sbjct:    3 VLIVYYSMYGHIHRMAEAVAEGVREVPGAEAVLRRVPETLSPDVLEKMGAVEPQKAFAHIPVATVDELASADAIIFGTPTRFGNMCGQMRQFLDATGGLWVKGSLVGKAAGVFTSSATQHGGQESTILTFHTFLLHQGMV 142          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SERP5 (Flavoprotein wrbA OS=Serratia proteamaculans (strain 568) GN=wrbA PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 9.473e-28
Identity = 61/137 (44.53%), Postives = 77/137 (56.20%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E LAE + +GA  V GVE  L +VPET+P E   K         P+ +P ELA+ DG +FG PTRFG MA Q + FLD TGGLW +  L GK  G  +              +  T L HHG I
Sbjct:    3 KILVLYYSMYGHIETLAEAVAEGARRVSGVEVTLKRVPETIPAEAFAKAGGKQDQKAPVASPQELADYDGIIFGTPTRFGNMAGQMRTFLDQTGGLWASGALYGK-VGSVFSSTGTGGGQEHTITSTWTTLAHHGFI 138          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_GEOMG (Flavoprotein wrbA OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=wrbA PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.237e-27
Identity = 67/141 (47.52%), Postives = 84/141 (59.57%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSA--PPKS--DVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV I +YSMYGH+ ++AE + +G   V G EA L +VPETLP +VL KM A  P K+   +P+ T +ELA AD  +FG PTRFG M  Q + FLDATGGLW    L GK  G+F              LT  T L+H GM+
Sbjct:    2 KVLIPFYSMYGHIYRMAEAVAEGVREVSGAEAVLRRVPETLPTDVLQKMGAVEPQKAFAHIPVCTVDELAAADAIIFGTPTRFGNMCGQMRQFLDATGGLWVKGGLVGKAGGVFTSSATQHGGQESTILTFHTFLLHQGMV 142          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_DESMR (Flavoprotein wrbA OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.237e-27
Identity = 66/140 (47.14%), Postives = 81/140 (57.86%), Query Frame = 1
Query:  118 VYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            V IVYYS+YGHV  +A+ + +G   V G+ A L +VPETL EEV+GKM A       S VP  T  EL +AD  VFG PTRFG M  Q + FLDATG +W    L GKP G+F              ++ I  L+HHGMI
Sbjct:    3 VLIVYYSLYGHVAAMAQAVAEGVHQVPGMTATLRRVPETLSEEVIGKMGATEAQKALSHVPACTLEELEDADAIVFGTPTRFGNMCGQMRQFLDATGQIWMRGGLVGKPGGVFCSTATQHGGQETTLMSFIQTLLHHGMI 142          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_YERPY (Flavoprotein wrbA OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=wrbA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.616e-27
Identity = 61/137 (44.53%), Postives = 78/137 (56.93%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFI 138          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_YERPS (Flavoprotein wrbA OS=Yersinia pseudotuberculosis GN=wrbA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.616e-27
Identity = 61/137 (44.53%), Postives = 78/137 (56.93%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFI 138          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_YERPP (Flavoprotein wrbA OS=Yersinia pestis (strain Pestoides F) GN=wrbA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.616e-27
Identity = 61/137 (44.53%), Postives = 78/137 (56.93%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFI 138          
The following BLAST results are available for this feature:
BLAST of DN618433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_GEOSF1.461e-2848.23Flavoprotein wrbA OS=Geobacter sp. (strain FRC-32)... [more]
P25_SCHPO1.909e-2848.20P25 protein OS=Schizosaccharomyces pombe GN=obr1 P... [more]
ALTA7_ALTAL2.493e-2849.30Minor allergen Alt a 7 OS=Alternaria alternata GN=... [more]
WRBA_GEOSL3.256e-2848.57Flavoprotein wrbA OS=Geobacter sulfurreducens GN=w... [more]
WRBA_SERP59.473e-2844.53Flavoprotein wrbA OS=Serratia proteamaculans (stra... [more]
WRBA_GEOMG1.237e-2747.52Flavoprotein wrbA OS=Geobacter metallireducens (st... [more]
WRBA_DESMR1.237e-2747.14Flavoprotein wrbA OS=Desulfovibrio magneticus (str... [more]
WRBA_YERPY1.616e-2744.53Flavoprotein wrbA OS=Yersinia pseudotuberculosis s... [more]
WRBA_YERPS1.616e-2744.53Flavoprotein wrbA OS=Yersinia pseudotuberculosis G... [more]
WRBA_YERPP1.616e-2744.53Flavoprotein wrbA OS=Yersinia pestis (strain Pesto... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02J01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002J01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618433 ID=DN618433; Name=DN618433; organism=Citrus sinensis; type=EST; length=526bp
ATACGACTTCTTAGGCTCTCCATTTTCCAATCCATTTTTTCAAACTTTTT
TTTTATATATAGAGAGAAAAGTAACAGAGACTCGTCGAAGAAGACTCCTT
AAGAGATGGCAACCAAAGTGTATATTGTGTACTATTCCATGTATGGACAT
GTAGAGAAACTGGCAGAAGAGATAAAGAAAGGAGCTTCATCTGTTGAGGG
TGTTGAAGCCAAATTATGGCAGGTCCCTGAGACACTACCTGAGGAGGTAC
TTGGTAAGATGAGTGCACCACCAAAGAGTGATGTACCTATTATTACCCCC
AACGAACTTGCTGAGGCTGATGGGTTTGTTTTTGGCTTCCCAACAAGATT
TGGAATGATGGCTGCTCAATTTAAAGCATTTTTAGATGCTACTGGTGGTC
TATGGAGGACACAACAGCTCGCTGGCAAACCTGCTGGGATGTTCTACAGC
ACTGGGTCACAAGGTGGTGGACAAGAGACTACAGCGTTGACGGCAATTAC
TCAGCTTGTTCACCATGGGATGATAT
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