CX046797

Overview
NameCX046797
Unique NameCX046797
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX046797_ssr77 microsatellite CX046797_ssr77:77..92. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1932 contig Csv1_Contig1932:67..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046797 vs. ExPASy Swiss-Prot
Match: KPK19_ARATH (Serine/threonine-protein kinase AtPK19 OS=Arabidopsis thaliana GN=ATPK19 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.367e-45
Identity = 114/254 (44.88%), Postives = 145/254 (57.09%), Query Frame = 3
Query:  153 STSQKNLHSXXXXXXXXXXITPPSASSPD---FDFTEVFGPLTPCRRNNQSPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSLR---LQIQELEH--------------END---AELEAESERK-------IGPGDFEILRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVS 824
            S + KN             I+PP +   D     F++VFGP+        S  +   +  +P V+++RSHS VGPS    +S SL+   L ++E E               END      + +SE+        +G  DFE+L+VVGQGAF                  IYAMKVMRKD I++KNH +YMKAERDILTK+ HPFIVQL+YSFQT+ +LYL+LDFINGGHLFF LY QG+FRED AR YTAEIVS
Sbjct:    7 SVANKNQTGKPFQKHLSLSISPPKSVLGDNLELQFSDVFGPMPEAN----SEEACDVAYDEPAVVYSRSHSLVGPS--LVVSHSLKMNKLTLRETEDSVDLVECVEGESIKENDEFSGNDDTDSEKSPEEVSGVVGIEDFEVLKVVGQGAFGKVYQVRKKDTSE-----IYAMKVMRKDKIVEKNHAEYMKAERDILTKIDHPFIVQLKYSFQTKYRLYLVLDFINGGHLFFQLYHQGLFREDLARVYTAEIVS 249          
BLAST of CX046797 vs. ExPASy Swiss-Prot
Match: KPK1_ARATH (Serine/threonine-protein kinase AtPK1/AtPK6 OS=Arabidopsis thaliana GN=ATPK1 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 103/225 (45.78%), Postives = 132/225 (58.67%), Query Frame = 3
Query:  237 DFDFTEVFGPLTPCRRNNQSPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSL-RLQIQELEHENDAE--LEAESERK--------------------------IGPGDFEILRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVS 824
            + +F++VFGPL           +   +  +P V+++RSHS VGP    + S  L +L + E E   D    LE ES ++                          +G  DFE+++VVG+GAF                  IYAMKVMRKD I++KNH +YMKAERDILTK+ HPFIVQL+YSFQT+ +LYL+LDFINGGHLFF LY QG+FRED AR YTAEIVS
Sbjct:   32 ELEFSDVFGPLPE--------EANDIAYDEPAVVYSRSHSLVGPCSLDSHSLKLTKLTLLETEDSIDLVECLEGESLKENDDFSGNDDSDNEKALEGDLVKVSGVVGIDDFEVMKVVGKGAFGKVYQVRKKETSE-----IYAMKVMRKDHIMEKNHAEYMKAERDILTKIDHPFIVQLKYSFQTKYRLYLVLDFINGGHLFFQLYHQGLFREDLARVYTAEIVS 243          
BLAST of CX046797 vs. ExPASy Swiss-Prot
Match: PK2_DICDI (Protein kinase 2 OS=Dictyostelium discoideum GN=pkgB PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.221e-25
Identity = 57/116 (49.14%), Postives = 78/116 (67.24%), Query Frame = 3
Query:  477 DFEILRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVS 824
            DFE+L V+G+G+F                  I+AMKV+RKD II +  V++ K+E+ IL  ++HPFIV L Y+FQT+ KLY++LDF+NGG LFFHL R+G F E + + Y AEIVS
Sbjct:  152 DFELLNVIGKGSFGKVMQVKKKGEDK-----IFAMKVLRKDAIIARKQVNHTKSEKTILQCISHPFIVNLHYAFQTKDKLYMVLDFVNGGELFFHLKREGRFSEPRVKIYAAEIVS 262          
BLAST of CX046797 vs. ExPASy Swiss-Prot
Match: KRAC_DICDI (RAC family serine/threonine-protein kinase homolog OS=Dictyostelium discoideum GN=pkbA PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.221e-25
Identity = 64/160 (40.00%), Postives = 90/160 (56.25%), Query Frame = 3
Query:  366 PSPRYALSSS--------LRLQIQELEHENDAELEAESERKIGPGDFEILRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 821
            PS  Y L S         + + I E E   +   + +   K+G  DFE+L +VG+G+F                  +YAMKV+ K  I++ N V++  +ER+IL K+ HPF+V L YSFQT  KLY ILD++NGG LF+HL +   F ED+ R+Y AEIV
Sbjct:   74 PSRTYFLCSETEEERAKWIEILINERELLLNGGKQPKKSEKVGVADFELLNLVGKGSFGKVIQVRKKDTGE-----VYAMKVLSKKHIVEHNEVEHTLSERNILQKINHPFLVNLNYSFQTEDKLYFILDYVNGGELFYHLQKDKKFTEDRVRYYGAEIV 228          
BLAST of CX046797 vs. ExPASy Swiss-Prot
Match: Y2070_DICDI (Probable serine/threonine-protein kinase DDB_G0277449 OS=Dictyostelium discoideum GN=DDB_G0277449 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.410e-23
Identity = 54/119 (45.38%), Postives = 74/119 (62.18%), Query Frame = 3
Query:  465 IGPGDFEILRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 821
            I   +F I  +VG+G F                  +YA+KV++K+ II K  V    AE+DIL K++HPFIV L Y+FQ   KLYL++DF+NGG LF+HL ++ IF EDQ RFY AE++
Sbjct:  123 INLSNFIIKHLVGKGGFGKVFQVVHVDTQK-----VYALKVIKKNHIIAKKSVVNTLAEKDILKKISHPFIVNLHYAFQNEKKLYLVMDFVNGGQLFYHLQKEAIFSEDQVRFYMAELI 236          
BLAST of CX046797 vs. ExPASy Swiss-Prot
Match: SGK2_MOUSE (Serine/threonine-protein kinase Sgk2 OS=Mus musculus GN=Sgk2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.410e-23
Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 3
Query:  471 PGDFEILRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVS 824
            P DF+ L+V+G+G +                   YA+KV++K +I+K    +++ AER++L K V HPF+V LRYSFQT  KLY +LD++NGG LFFHL R+  F E +ARFYTAE+ S
Sbjct:   32 PTDFDFLKVIGKGNYGKVLLAKRKSDGA-----FYAVKVLQKKSILKNKEQNHIMAERNVLLKNVRHPFLVGLRYSFQTPEKLYFVLDYVNGGELFFHLQRERRFLEPRARFYTAEVAS 145          
BLAST of CX046797 vs. ExPASy Swiss-Prot
Match: SGK2_RAT (Serine/threonine-protein kinase Sgk2 OS=Rattus norvegicus GN=Sgk2 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.677e-23
Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 3
Query:  471 PGDFEILRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVS 824
            P DF+ L+V+G+G +                   YA+KV++K +I+K     ++ AER++L K V HPF+V LRYSFQT  KLY +LD++NGG LFFHL R+  F E +ARFYTAE+ S
Sbjct:   32 PTDFDFLKVIGKGNYGKVLLAKRKSDGA-----FYAVKVLQKKSILKNKEQSHIMAERNVLLKNVRHPFLVGLRYSFQTPEKLYFVLDYVNGGELFFHLQREHRFLEPRARFYTAEVAS 145          
BLAST of CX046797 vs. ExPASy Swiss-Prot
Match: SGK1_DANRE (Serine/threonine-protein kinase Sgk1 OS=Danio rerio GN=sgk1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.677e-23
Identity = 55/119 (46.22%), Postives = 75/119 (63.03%), Query Frame = 3
Query:  471 PGDFEILRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVS 824
            P DF+ L+V+G+G+F                   YA+KV++K  I+KK    ++ +ER++L K V HPF+V L YSFQT  KLY +LD+INGG LF+HL R+  F E +ARFY AEI S
Sbjct:   97 PSDFDFLKVIGKGSFGKVLLARHRSDEK-----FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHYSFQTTDKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIAS 210          
BLAST of CX046797 vs. ExPASy Swiss-Prot
Match: KS6B2_HUMAN (Ribosomal protein S6 kinase beta-2 OS=Homo sapiens GN=RPS6KB2 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.677e-23
Identity = 65/158 (41.14%), Postives = 89/158 (56.33%), Query Frame = 3
Query:  360 VGPSPRYALSSSLRLQIQELEHENDAELEAES----ERKIGPGDFEILRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKK-NHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 818
            + P+    L+      ++ + H  + EL   S      +IGP  FE+LRV+G+G +                  IYAMKV+RK  I++      + +AER+IL  V HPFIV+L Y+FQT  KLYLIL+ ++GG LF HL R+GIF ED A FY AEI
Sbjct:   23 LSPADACPLAELRAAGLEPVGHYEEVELTETSVNVGPERIGPHCFELLRVLGKGGYGKVFQVRKVQGTNLGK--IYAMKVLRKAKIVRNAKDTAHTRAERNILESVKHPFIVELAYAFQTGGKLYLILECLSGGELFTHLEREGIFLEDTACFYLAEI 178          
BLAST of CX046797 vs. ExPASy Swiss-Prot
Match: SGK2_HUMAN (Serine/threonine-protein kinase Sgk2 OS=Homo sapiens GN=SGK2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.264e-22
Identity = 55/119 (46.22%), Postives = 75/119 (63.03%), Query Frame = 3
Query:  471 PGDFEILRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVS 824
            P DF+ L+V+G+G +                   YA+KV++K +I+KK    ++ AER +L K V HPF+V LRYSFQT  KLY +LD++NGG LFFHL R+  F E +ARFY AE+ S
Sbjct:   92 PTDFDFLKVIGKGNYGKVLLAKRKSDGA-----FYAVKVLQKKSILKKKEQSHIMAERSVLLKNVRHPFLVGLRYSFQTPEKLYFVLDYVNGGELFFHLQRERRFLEPRARFYAAEVAS 205          
The following BLAST results are available for this feature:
BLAST of CX046797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
KPK19_ARATH2.367e-4544.88Serine/threonine-protein kinase AtPK19 OS=Arabidop... [more]
KPK1_ARATH2.449e-4245.78Serine/threonine-protein kinase AtPK1/AtPK6 OS=Ara... [more]
PK2_DICDI1.221e-2549.14Protein kinase 2 OS=Dictyostelium discoideum GN=pk... [more]
KRAC_DICDI1.221e-2540.00RAC family serine/threonine-protein kinase homolog... [more]
Y2070_DICDI7.410e-2345.38Probable serine/threonine-protein kinase DDB_G0277... [more]
SGK2_MOUSE7.410e-2346.22Serine/threonine-protein kinase Sgk2 OS=Mus muscul... [more]
SGK2_RAT9.677e-2346.22Serine/threonine-protein kinase Sgk2 OS=Rattus nor... [more]
SGK1_DANRE9.677e-2346.22Serine/threonine-protein kinase Sgk1 OS=Danio reri... [more]
KS6B2_HUMAN9.677e-2341.14Ribosomal protein S6 kinase beta-2 OS=Homo sapiens... [more]
SGK2_HUMAN1.264e-2246.22Serine/threonine-protein kinase Sgk2 OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10C06_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10C06-F11-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046797 ID=CX046797; Name=CX046797; organism=Citrus sinensis; type=EST; length=825bp
CTCCGTTGTTCTGAAATGTAATCTCTGCTCCTCCAGCCTGCCTCGTTTGG
CTGGCTCCGTCCTTGTTCTAACTTGGAATAAATAAATAAATAAAAAGGGA
GTAAAAGGCGGATTTCTCATCTTTCTTCAACCTACGGAGCAAAAACATGG
TGTCCACGTCACAGAAAAACCTTCACTCACTATTAACAACGAAACTGAAA
AAGCTAACCATCACTCCACCCTCCGCTTCTTCCCCAGACTTCGACTTCAC
CGAAGTCTTCGGACCCTTAACGCCCTGCCGCCGCAACAACCAATCACCTG
CATCCACGTCAGCCTCTTTGGGTGACCCGCAGGTGATCCACAACCGCTCC
CACTCTTTCGTGGGTCCCTCCCCTCGTTACGCCCTCTCCTCCTCCCTTCG
TCTCCAAATCCAAGAACTCGAACACGAAAACGATGCCGAATTGGAAGCTG
AAAGTGAGAGAAAGATCGGGCCGGGTGATTTTGAGATATTGAGGGTTGTG
GGACAGGGCGCGTTTGGTAAAGTGTTTCAAGTGAAGAAGAAAGGAGTCGA
TGATGGCGATAGTGATGGGATTTATGCAATGAAAGTTATGAGAAAAGATA
CGATTATAAAGAAGAATCATGTGGATTACATGAAAGCTGAAAGGGATATC
CTCACCAAAGTCACCCATCCTTTTATTGTCCAGCTCCGCTACTCTTTCCA
GACGAGGTCTAAGCTGTATTTGATATTGGACTTTATAAATGGAGGGCATC
TCTTCTTTCATCTGTATCGGCAAGGAATCTTCCGTGAGGATCAGGCAAGG
TTTTATACTGCTGAGATAGTATCTG
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