CX046796

Overview
NameCX046796
Unique NameCX046796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046796 vs. ExPASy Swiss-Prot
Match: KPK19_ARATH (Serine/threonine-protein kinase AtPK19 OS=Arabidopsis thaliana GN=ATPK19 PE=2 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 5.439e-83
Identity = 141/190 (74.21%), Postives = 167/190 (87.89%), Query Frame = -2
Query:  315 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMLTDFGLAKEIDESSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLTGQPPFTHANRQKLQQRIINEKVKLPPFLTSEAHSLLKGLLHKDPSKRLGSGPGGVDTIKHHKWFRSINWKTLEAREMQPKFKPDVSGKDCIANFDKCW 884
            R YTAEIVSAVSHLH+ GI+HRDLKPENILMD DGHVMLTDFGLAKE +E++RSNSMCGTTEYMAPEI+  KGH+K ADWWSVG+LLYEMLTG+PPF   ++ K+QQ+I+ +K+KLP FL++EAH+LLKGLL K+P +RLGSGP G + IK HKWF++INWK LEARE+QP FKP VSG+ CIANFDKCW
Sbjct:  241 RVYTAEIVSAVSHLHEKGIMHRDLKPENILMDVDGHVMLTDFGLAKEFEENTRSNSMCGTTEYMAPEIVRGKGHDKAADWWSVGILLYEMLTGKPPFL-GSKGKIQQKIVKDKIKLPQFLSNEAHALLKGLLQKEPERRLGSGPSGAEEIKKHKWFKAINWKKLEAREVQPSFKPAVSGRQCIANFDKCW 429          
BLAST of CX046796 vs. ExPASy Swiss-Prot
Match: KPK1_ARATH (Serine/threonine-protein kinase AtPK1/AtPK6 OS=Arabidopsis thaliana GN=ATPK1 PE=1 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.699e-82
Identity = 144/222 (64.86%), Postives = 173/222 (77.93%), Query Frame = -2
Query:  228 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMLTDFGLAKEIDESSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLTGQPPFTHANRQKLQQRIINEKVKLPPFLTSEAHSLLKGLLHKDPSKRLGSGPGGVDTIKHHKWFRSINWKTLEAREMQPKFKPDVSGKDCIANFDKCW---XXXXXXXXXXXXXXAGEHFKGYTYVAPNP 884
            R YTAEIVSAVSHLH+ GI+HRDLKPENILMD+DGHVMLTDFGLAKE +E++RSNSMCGTTEYMAPEI+  KGH+K ADWWSVG+LLYEMLTG+PPF   ++ K+QQ+I+ +K+KLP FL++EAH++LKGLL K+P +RLGSG  G + IK HKWF+ INWK LEARE+ P FKP+VSG+ CIANFDKCW                     F  +TYV P P
Sbjct:  235 RVYTAEIVSAVSHLHEKGIMHRDLKPENILMDTDGHVMLTDFGLAKEFEENTRSNSMCGTTEYMAPEIVRGKGHDKAADWWSVGILLYEMLTGKPPFL-GSKGKIQQKIVKDKIKLPQFLSNEAHAILKGLLQKEPERRLGSGLSGAEEIKQHKWFKGINWKKLEAREVMPSFKPEVSGRQCIANFDKCWTDMSVLDSPASSPSSDPKANPFTNFTYVRPPP 455          
BLAST of CX046796 vs. ExPASy Swiss-Prot
Match: KS6B1_RAT (Ribosomal protein S6 kinase beta-1 OS=Rattus norvegicus GN=Rps6kb1 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.649e-55
Identity = 106/221 (47.96%), Postives = 148/221 (66.97%), Query Frame = -2
Query:  231 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMLTDFGLAKE-IDESSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLTGQPPFTHANRQKLQQRIINEKVKLPPFLTSEAHSLLKGLLHKDPSKRLGSGPGGVDTIKHHKWFRSINWKTLEAREMQPKFKPDVSGKDCIANFDKCW---XXXXXXXXXXXXXXAGEHFKGYTYVAPN 881
            FY AEI  A+ HLH+ GI++RDLKPENI+++  GHV LTDFGL KE I + + +++ CGT EYMAPEIL+  GHN+  DWWS+G L+Y+MLTG PPFT  NR+K   +I+  K+ LPP+LT EA  LLK LL ++ + RLG+GPG    ++ H +FR INW+ L AR+++P FKP +  ++ ++ FD  +                 A + F G+TYVAP+
Sbjct:  197 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLGFTYVAPS 417          
BLAST of CX046796 vs. ExPASy Swiss-Prot
Match: KS6B1_RABIT (Ribosomal protein S6 kinase beta-1 OS=Oryctolagus cuniculus GN=RPS6KB1 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.649e-55
Identity = 106/221 (47.96%), Postives = 148/221 (66.97%), Query Frame = -2
Query:  231 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMLTDFGLAKE-IDESSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLTGQPPFTHANRQKLQQRIINEKVKLPPFLTSEAHSLLKGLLHKDPSKRLGSGPGGVDTIKHHKWFRSINWKTLEAREMQPKFKPDVSGKDCIANFDKCW---XXXXXXXXXXXXXXAGEHFKGYTYVAPN 881
            FY AEI  A+ HLH+ GI++RDLKPENI+++  GHV LTDFGL KE I + + +++ CGT EYMAPEIL+  GHN+  DWWS+G L+Y+MLTG PPFT  NR+K   +I+  K+ LPP+LT EA  LLK LL ++ + RLG+GPG    ++ H +FR INW+ L AR+++P FKP +  ++ ++ FD  +                 A + F G+TYVAP+
Sbjct:  197 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLGFTYVAPS 417          
BLAST of CX046796 vs. ExPASy Swiss-Prot
Match: KS6B1_MOUSE (Ribosomal protein S6 kinase beta-1 OS=Mus musculus GN=Rps6kb1 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.649e-55
Identity = 106/221 (47.96%), Postives = 148/221 (66.97%), Query Frame = -2
Query:  231 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMLTDFGLAKE-IDESSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLTGQPPFTHANRQKLQQRIINEKVKLPPFLTSEAHSLLKGLLHKDPSKRLGSGPGGVDTIKHHKWFRSINWKTLEAREMQPKFKPDVSGKDCIANFDKCW---XXXXXXXXXXXXXXAGEHFKGYTYVAPN 881
            FY AEI  A+ HLH+ GI++RDLKPENI+++  GHV LTDFGL KE I + + +++ CGT EYMAPEIL+  GHN+  DWWS+G L+Y+MLTG PPFT  NR+K   +I+  K+ LPP+LT EA  LLK LL ++ + RLG+GPG    ++ H +FR INW+ L AR+++P FKP +  ++ ++ FD  +                 A + F G+TYVAP+
Sbjct:  197 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLGFTYVAPS 417          
BLAST of CX046796 vs. ExPASy Swiss-Prot
Match: KS6B1_HUMAN (Ribosomal protein S6 kinase beta-1 OS=Homo sapiens GN=RPS6KB1 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.649e-55
Identity = 106/221 (47.96%), Postives = 148/221 (66.97%), Query Frame = -2
Query:  231 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMLTDFGLAKE-IDESSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLTGQPPFTHANRQKLQQRIINEKVKLPPFLTSEAHSLLKGLLHKDPSKRLGSGPGGVDTIKHHKWFRSINWKTLEAREMQPKFKPDVSGKDCIANFDKCW---XXXXXXXXXXXXXXAGEHFKGYTYVAPN 881
            FY AEI  A+ HLH+ GI++RDLKPENI+++  GHV LTDFGL KE I + + +++ CGT EYMAPEIL+  GHN+  DWWS+G L+Y+MLTG PPFT  NR+K   +I+  K+ LPP+LT EA  LLK LL ++ + RLG+GPG    ++ H +FR INW+ L AR+++P FKP +  ++ ++ FD  +                 A + F G+TYVAP+
Sbjct:  197 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLGFTYVAPS 417          
BLAST of CX046796 vs. ExPASy Swiss-Prot
Match: KS6B1_BOVIN (Ribosomal protein S6 kinase beta-1 OS=Bos taurus GN=RPS6KB1 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.649e-55
Identity = 106/221 (47.96%), Postives = 148/221 (66.97%), Query Frame = -2
Query:  231 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMLTDFGLAKE-IDESSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLTGQPPFTHANRQKLQQRIINEKVKLPPFLTSEAHSLLKGLLHKDPSKRLGSGPGGVDTIKHHKWFRSINWKTLEAREMQPKFKPDVSGKDCIANFDKCW---XXXXXXXXXXXXXXAGEHFKGYTYVAPN 881
            FY AEI  A+ HLH+ GI++RDLKPENI+++  GHV LTDFGL KE I + + +++ CGT EYMAPEIL+  GHN+  DWWS+G L+Y+MLTG PPFT  NR+K   +I+  K+ LPP+LT EA  LLK LL ++ + RLG+GPG    ++ H +FR INW+ L AR+++P FKP +  ++ ++ FD  +                 A + F G+TYVAP+
Sbjct:  197 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSALSESANQVFLGFTYVAPS 417          
BLAST of CX046796 vs. ExPASy Swiss-Prot
Match: KS6B2_HUMAN (Ribosomal protein S6 kinase beta-2 OS=Homo sapiens GN=RPS6KB2 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.069e-54
Identity = 103/221 (46.61%), Postives = 143/221 (64.71%), Query Frame = -2
Query:  231 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMLTDFGLAKE-IDESSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLTGQPPFTHANRQKLQQRIINEKVKLPPFLTSEAHSLLKGLLHKDPSKRLGSGPGGVDTIKHHKWFRSINWKTLEAREMQPKFKPDVSGKDCIANFDKCW---XXXXXXXXXXXXXXAGEHFKGYTYVAPN 881
            FY AEI  A+ HLH  GI++RDLKPENI++ S GH+ LTDFGL KE I E + +++ CGT EYMAPEIL+  GHN+  DWWS+G L+Y+MLTG PPFT  NR+K   +II  K+ LPP+LT +A  L+K  L ++PS+R+G GPG    ++ H +FR +NW  L A  + P F+P +  ++ ++ FD  +                 A + F G+TYVAP+
Sbjct:  173 FYLAEITLALGHLHSQGIIYRDLKPENIMLSSQGHIKLTDFGLCKESIHEGAVTHTFCGTIEYMAPEILVRSGHNRAVDWWSLGALMYDMLTGSPPFTAENRKKTMDKIIRGKLALPPYLTPDARDLVKKFLKRNPSQRIGGGPGDAADVQRHPFFRHMNWDDLLAWRVDPPFRPCLQSEEDVSQFDTRFTRQTPVDSPDDTALSESANQAFLGFTYVAPS 393          
BLAST of CX046796 vs. ExPASy Swiss-Prot
Match: KS6B2_MOUSE (Ribosomal protein S6 kinase beta-2 OS=Mus musculus GN=Rps6kb2 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.381e-54
Identity = 103/221 (46.61%), Postives = 142/221 (64.25%), Query Frame = -2
Query:  231 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMLTDFGLAKE-IDESSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLTGQPPFTHANRQKLQQRIINEKVKLPPFLTSEAHSLLKGLLHKDPSKRLGSGPGGVDTIKHHKWFRSINWKTLEAREMQPKFKPDVSGKDCIANFDKCW---XXXXXXXXXXXXXXAGEHFKGYTYVAPN 881
            FY AEI  A+ HLH  GI++RDLKPENI++ S GH+ LTDFGL KE I E + +++ CGT EYMAPEIL+  GHN+  DWWS+G L+Y+MLTG PPFT  NR+K   +II  K+ LPP+LT +A  L K  L ++P++R+G G G    ++ H +FR INW  L AR + P F+P +  ++ ++ FD  +                 A + F G+TYVAP+
Sbjct:  173 FYLAEITLALGHLHSHGIIYRDLKPENIMLSSQGHIKLTDFGLCKESIHEGAITHTFCGTIEYMAPEILVRTGHNRAVDWWSLGALMYDMLTGSPPFTAENRKKTMDKIIKGKLVLPPYLTPDARDLAKKFLKRNPTQRIGGGLGDAADVQRHPFFRHINWDDLLARRVDPPFRPSLQSEEDVSQFDARFTRQTPVDSPDDTALSESANQAFLGFTYVAPS 393          
BLAST of CX046796 vs. ExPASy Swiss-Prot
Match: Y2070_DICDI (Probable serine/threonine-protein kinase DDB_G0277449 OS=Dictyostelium discoideum GN=DDB_G0277449 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.048e-54
Identity = 100/188 (53.19%), Postives = 133/188 (70.74%), Query Frame = -2
Query:  324 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMLTDFGLAK-EIDESSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLTGQPPFTHANRQKLQQRIINEKVKLPPFLTSEAHSLLKGLLHKDPSKRLGSGPGGVDTIKHHKWFRSINWKTLEAREMQPKFKPDVSGKDCIANFD 884
            RFY AE++ A+ HLH   IVHRDLKPENIL+DS GH +LTDFGLAK E+  ++ + S  GT EYMAPE++      K  DWWS+G+L+Y+M+ G+PPF H NR  +Q++II+EK K P F++S A SL+ GLL KDP+KRLG+   G   IK H +F+SI W+ +E +E+ P F P   G D I+NFD
Sbjct:  229 RFYMAELILALEHLHDSNIVHRDLKPENILLDSQGHCILTDFGLAKLEVKTNNETFSFAGTLEYMAPEMIQHATCGKAVDWWSIGILMYDMMIGKPPFEHKNRALMQEKIISEKAKFPKFVSSSARSLINGLLTKDPTKRLGA--NGAIEIKRHPFFKSIQWRKIENKEITPPFVPSTKGIDDISNFD 414          
The following BLAST results are available for this feature:
BLAST of CX046796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KPK19_ARATH5.439e-8374.21Serine/threonine-protein kinase AtPK19 OS=Arabidop... [more]
KPK1_ARATH2.699e-8264.86Serine/threonine-protein kinase AtPK1/AtPK6 OS=Ara... [more]
KS6B1_RAT1.649e-5547.96Ribosomal protein S6 kinase beta-1 OS=Rattus norve... [more]
KS6B1_RABIT1.649e-5547.96Ribosomal protein S6 kinase beta-1 OS=Oryctolagus ... [more]
KS6B1_MOUSE1.649e-5547.96Ribosomal protein S6 kinase beta-1 OS=Mus musculus... [more]
KS6B1_HUMAN1.649e-5547.96Ribosomal protein S6 kinase beta-1 OS=Homo sapiens... [more]
KS6B1_BOVIN1.649e-5547.96Ribosomal protein S6 kinase beta-1 OS=Bos taurus G... [more]
KS6B2_HUMAN1.069e-5446.61Ribosomal protein S6 kinase beta-2 OS=Homo sapiens... [more]
KS6B2_MOUSE2.381e-5446.61Ribosomal protein S6 kinase beta-2 OS=Mus musculus... [more]
Y2070_DICDI9.048e-5453.19Probable serine/threonine-protein kinase DDB_G0277... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10C06_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10C06-F11-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046796 ID=CX046796; Name=CX046796; organism=Citrus sinensis; type=EST; length=885bp
TTTTTTATTCGAACATTTCTATATATTGGCTAGAGGCTTGATTGAAAATC
CATGCTATTCTTACAAGAATACAATACAATATACAACAAGTGTAGACATC
ATATTCTAGTTGAAAAATAAGAAAGAACTATCAAGGAGTTATGGACAGGT
GCATTCCTCATCATTCGCCTTTTTTATTTTCCCCCCTTTTCGGGTTGGAA
CCTTTTAATTCACACTGATGAAAGCCAAGGGTTAGGCGCCACATAAGTGT
ACCCTTTGAAATGCTCACCTGCTGTCGGTGTGGGAGCCGGTGAATCATCT
GCCGGCATTGTTGTCCAGCACTTGTCGAAATTGGCTATACAGTCTTTTCC
ACTCACATCTGGCTTGAATTTTGGCTGCATTTCTCTGGCCTCCAACGTCT
TCCAGTTGATTGATCGAAACCATTTGTGGTGTTTGATGGTGTCCACTCCA
CCAGGCCCGCTACCTAACCTTTTAGATGGGTCCTTGTGCAGCAATCCTTT
AAGCAAAGAGTGAGCTTCACTGGTAAGAAAAGGTGGAAGTTTCACTTTCT
CATTAATAATTCTCTGTTGAAGCTTCTGTCTATTTGCATGTGTAAACGGT
GGCTGCCCCGTCAACATTTCATACAGGAGTACTCCAACACTCCACCAGTC
TGCATCTTTGTTGTGGCCTTTTGAAAGTAAAATTTCAGGAGCCATGTATT
CTGTGGTTCCACACATTGAATTTGATCTACTTGATTCGTCAATTTCCTTT
GCAAGTCCGAAATCAGTTAGCATAACATGCCCATCAGAATCCATGAGTAT
ATTTTCTGGTTTAAGATCCCGGTGCACGATCCCGCACTTGTGAAGATGTG
AAACCGCAGATACTATCTCAGCAGTATAAAACCTT
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