DN618427

Overview
NameDN618427
Unique NameDN618427
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618427 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.061e-23
Identity = 64/173 (36.99%), Postives = 96/173 (55.49%), Query Frame = 2
Query:  161 DPSEQIFFTISDLKIGKSL--PIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPL-QNYTILKLPEEIYAPKMVACHSMPYPYAVFYCHYQESENKLFSS 670
            DP   +FF   +L+ GK +   ++F+    +T+   LPR +A+SIPFSS ELP +L+ F     S  A  M  TL  CEL   KGE K CATSLES++DF    FG  ++    +T  ++  +  + L Q+YT+  +       +++ACH   YPYAVF CH  E+  + + +
Sbjct:  357 DPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFG-ASDVDAASTVVLSKAVESSSLAQDYTVSGVRRMAGTGQLIACHPESYPYAVFMCHLTEATTRAYKA 528          
BLAST of DN618427 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.263e-23
Identity = 58/154 (37.66%), Postives = 88/154 (57.14%), Query Frame = 2
Query:  176 IFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTILKLPEEIYAPKMVACHSMPYPYAVFYCH 637
            +FF    +++G+ LP +F    P+     LPR  A+S+PF+++ LP +L  F  + DS    +M+ TL  CE   + GE+KFCATSLE++++   GV G   + + +T+   T P  G PLQ YT++ +      P  VACH   YPY V+ CH
Sbjct:  141 VFFHEEAVRVGRRLPFHFPPATPAALG-FLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLGTR-DIRPVTS---TLPRAGAPLQTYTVVAVQPVEGGPVFVACHDEAYPYTVYRCH 289          
BLAST of DN618427 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.263e-23
Identity = 63/163 (38.65%), Postives = 88/163 (53.99%), Query Frame = 2
Query:  161 DPSEQIFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTILKLPEEIYAPKMVACHSMPYPYAVFYCHYQES 649
            DP+  +FF  ++L+  KS+ ++F+     T    LPR EA+++PFSS +L  +L  F     S  A  +K TL +CEL   KGE K CATSLESM+DF     G   + K  +T F+       P Q YT+          +++ACH   YPYAVF CH  E+
Sbjct:  103 DPTMGLFFLETNLQSSKSIKLHFANMMAGTK--FLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLESMVDFVASSLGTR-DIKAAST-FLVGKDGDTPAQEYTVTGARRMAETGQLIACHPESYPYAVFMCHLTEA 261          
BLAST of DN618427 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.531e-22
Identity = 62/162 (38.27%), Postives = 88/162 (54.32%), Query Frame = 2
Query:  161 DPSEQIFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTILKLPEEIYA---PKMVACHSMPYPYAVFYCH 637
            DP+  +FF   DL  GK++ ++F+    +     LPR EA+++PFSS ++P +L  FS    S +A  M  TL  CE  P +GE K CATSLESM+DF     G  T+     +  +     G+P Q YT+  +          ++VACH+ PY YAVF CH
Sbjct:  207 DPNVALFFLEKDLHPGKTMAVHFTAT--TAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLG--TSHVRAASTVVGKE--GSPEQEYTVTAVKRAAAGGDQDQLVACHAEPYAYAVFACH 362          
BLAST of DN618427 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.412e-22
Identity = 60/161 (37.27%), Postives = 88/161 (54.66%), Query Frame = 2
Query:  161 DPSEQIFFTISDLKIGKSLPIYFSYKDP-STSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTILKL-PEEIYAPKMVACHSMPYPYAVFYCH 637
            DP+  +FF   DL  GK + + F+ +D        LPR EA ++PF S +    L+ FS    S +AE MK T+ +CE + + GE K+CATSLESM+DF+    G + + + ++T          P+Q Y I     +++   K V CH   YP+AVFYCH
Sbjct:  170 DPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLG-KYHVRAVSTEVAKK---NAPMQKYKIAAAGVKKLSDDKSVVCHKQKYPFAVFYCH 326          
BLAST of DN618427 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.211e-21
Identity = 58/154 (37.66%), Postives = 85/154 (55.19%), Query Frame = 2
Query:  176 IFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTILKLPEEIYAPKMVACHSMPYPYAVFYCH 637
            +FF    +++GK LP  F    P+     LPR  A+S+PF+++ LP +L  F  + DS    +M+ TL  CE   + GE+KFCATSLE++++    V G   + + +T+   T P  G PLQ YT+  +      P  VACH   YPY V+ CH
Sbjct:  168 VFFHEEAVRVGKRLPFRFPPATPAALG-FLPRQVADSVPFTTAALPGVLATFGVASDSATVASMEATLRACESPTIAGESKFCATSLEALVERAMEVLGTR-DIRPVTS---TLPRAGAPLQTYTVRSVRPVEGGPVFVACHDEAYPYTVYRCH 316          
BLAST of DN618427 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.434e-21
Identity = 61/160 (38.12%), Postives = 81/160 (50.62%), Query Frame = 2
Query:  161 DPSEQIFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTILKL-PEEIYAPKMVACHSMPYPYAVFYCH 637
            D    +FF   DL  G  + ++F+      +  LLPR  A+S+PF+S +LP +L   S    S  A+AM+ TL +CE  P  GE K CATSLESM++F     G      + T      P    P Q Y +  + P  +    MVACH M Y YAVF CH
Sbjct:   22 DTVNNVFFLEKDLFPGSKMTLHFTRATAGAA--LLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTRDVHAVSTEVDRAGP---TPRQAYRVEAVRPVPVSGGDMVACHGMAYAYAVFGCH 176          
BLAST of DN618427 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.114e-20
Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 2
Query:  176 IFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTI-LKLPEEIYAPKMVACHSMPYPYAVFYCH 637
            +FF    +++G+ LP YF     S     LPR  A+SIPF+++ LP +L  F  + D+ +A  M+ TL  CE   L GE+KFCATSLE++++      G      + +    T P  G PLQ Y +   LP E      VACH   YPY V+ CH
Sbjct:  189 VFFHEEAVRVGERLPFYFPAATTSALG-FLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALAS----TLPRGGAPLQAYAVRAVLPVE--GAGFVACHDQAYPYTVYRCH 336          
BLAST of DN618427 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.342e-18
Identity = 61/164 (37.20%), Postives = 81/164 (49.39%), Query Frame = 2
Query:  161 DPSEQIFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGET----KFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTILKL-PEEIYAPKMVACHSMPYPYAVFYCH 637
            D    +FF   DL  G  + ++F+      +  LLPR  A S+PF+S  LP +L   S    S  A+AM  TL +CE   L GET     +CATSLESM++F     G      + T   + + L   P Q Y +  + P  +    MVACH MPY YAVF  H
Sbjct:   59 DTVGNVFFLEKDLFPGSKMTLHFTRATAGAA--LLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEFVASSLGTRDVHAVSTE--VISTLTPTPRQAYRVEAVRPVAVPGGDMVACHGMPYAYAVFGLH 218          
BLAST of DN618427 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.483e-17
Identity = 56/161 (34.78%), Postives = 82/161 (50.93%), Query Frame = 2
Query:  167 SEQIFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCE--LQPLKGETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTI--LKLPEEIYAPKMVACHSMPYPYAVFYCH 637
            ++ +FF   DL  G  + ++F+         +L R  A++IPF+S +LP +L   S    S  AE M+ TL +CE  L   + + K C TSLESM++F     G   + + ++T  I       P Q YT+  +K    +    MV CH MPY YAVF CH
Sbjct:   94 TDAVFFLEKDLFPGSKITLHFTRGGACAM--VLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECEAALLGARDQAKHCVTSLESMVEFAAASLGTR-DIRAVSTEVIGTGAAETPRQEYTVEAVKPVVSVSGGNMVTCHGMPYAYAVFGCH 251          
The following BLAST results are available for this feature:
BLAST of DN618427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
BURPH_ORYSJ1.061e-2336.99BURP domain-containing protein 17 OS=Oryza sativa ... [more]
RAF1B_WHEAT5.263e-2337.66Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
BURP5_ORYSJ5.263e-2338.65BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURP3_ORYSJ1.531e-2238.27BURP domain-containing protein 3 OS=Oryza sativa s... [more]
RD22_ARATH3.412e-2237.27Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
RAF1A_WHEAT2.211e-2137.66Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A... [more]
BURP6_ORYSJ6.434e-2138.13BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURPD_ORYSJ7.114e-2038.06BURP domain-containing protein 13 OS=Oryza sativa ... [more]
BURP1_ORYSJ1.342e-1837.20BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP8_ORYSJ1.483e-1734.78BURP domain-containing protein 8 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02I22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002I22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618427 ID=DN618427; Name=DN618427; organism=Citrus sinensis; type=EST; length=678bp
CCCCCTTTTATCTTCCCGGAGCTTCACCCTCTGCGTCCTTCTTGTTTTAA
TGTTTGCTCAAAAGAGTACAACCAGGAAGGTAGTAACTAAAGACAATCAG
CAAGCTTTAGCTAATACTGATGGTCATTCGTCATCATCACACATGATGAA
TAATCATATGGACCCTTCAGAGCAAATTTTCTTTACCATTAGTGATCTTA
AAATTGGAAAATCTTTGCCCATTTATTTCTCTTACAAAGATCCTTCAACT
TCACCTCATTTGTTACCTAGAGATGAAGCCAATTCAATTCCTTTCTCTTC
ATCTGAATTACCTTATCTTCTTGAATTCTTCTCCTTCTCAAAAGACTCTC
ACCAAGCCGAGGCCATGAAATACACACTTACTCAATGCGAACTTCAACCC
CTCAAAGGAGAGACCAAGTTTTGTGCTACCTCCTTAGAATCCATGCTTGA
TTTCACACGCGGCGTCTTCGGATTGGAAACCAACTTCAAAATTTTAACCA
CTAATTTCATCACAAACCCGTTAATTGGTAATCCTTTGCAAAACTATACC
ATCTTGAAATTGCCTGAAGAAATTTATGCTCCAAAAATGGTAGCATGTCA
TTCTATGCCTTACCCATATGCAGTCTTTTATTGCCATTATCAAGAGAGTG
AGAACAAGTTGTTTTCAAGTTTCTCTGA
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