DN618425

Overview
NameDN618425
Unique NameDN618425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618425 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 1.963e-66
Identity = 113/129 (87.60%), Postives = 120/129 (93.02%), Query Frame = -2
Query:  242 AYVGAGGLSFXQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 628
            AYVGAGGLSF QFCNLNSFR KFILGFS+F+GLS+PQYFNEYTAI G+GPVHT  RWFNDMVN+PFSSEPFVAG VAFFLDNTLHKKD  +RKDRG+HWWDKF SFKGDTRSEEFYSLPFNLNKYFPSV
Sbjct:  404 AYVGAGGLSFLQFCNLNSFRTKFILGFSVFLGLSIPQYFNEYTAIKGYGPVHTGARWFNDMVNVPFSSEPFVAGSVAFFLDNTLHKKDSSIRKDRGKHWWDKFRSFKGDTRSEEFYSLPFNLNKYFPSV 532          
BLAST of DN618425 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.456e-61
Identity = 102/129 (79.07%), Postives = 115/129 (89.15%), Query Frame = -2
Query:  242 AYVGAGGLSFXQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 628
            AYVGAGGLS  QFCNLNSFR  FILGFSIF+GLS+PQYFNE+TAI G+GPVHT  RWFNDMVN+PFSS+ FV GCVA+ LD TLHKKDG +RKDRG+HWWD+FW+FK D R+EEFY+LPFNLNKYFPSV
Sbjct:  400 AYVGAGGLSLLQFCNLNSFRTLFILGFSIFLGLSIPQYFNEHTAIKGYGPVHTGARWFNDMVNVPFSSKAFVGGCVAYLLDTTLHKKDGSIRKDRGKHWWDRFWTFKNDPRTEEFYALPFNLNKYFPSV 528          
BLAST of DN618425 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.175e-57
Identity = 99/129 (76.74%), Postives = 111/129 (86.05%), Query Frame = -2
Query:  242 AYVGAGGLSFXQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 628
            AYVGAGGLS  QFCNLNSFR KFILGFS+F+GLS+PQYFN+YTA+N +GPVHT  RWFNDM+N+PFSS+ FVAG +AFFLD T+  KD   RKDRG  WWD+F SFK DTRSEEFYSLPFNLNKYFPSV
Sbjct:  410 AYVGAGGLSLLQFCNLNSFRTKFILGFSVFMGLSIPQYFNQYTAVNKYGPVHTHARWFNDMINVPFSSKAFVAGILAFFLDVTMSSKDSATRKDRGMFWWDRFMSFKSDTRSEEFYSLPFNLNKYFPSV 538          
BLAST of DN618425 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.111e-48
Identity = 86/128 (67.19%), Postives = 103/128 (80.47%), Query Frame = -2
Query:  245 AYVGAGGLSFXQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 628
            +YVGAGGLS  QFCNLNSFR KFILGFSIF+GLS+PQYF +YT +  +GPV TS  WFN+++N+PFSS+ FV+G +AFFLD TL  KD   +KDRG  WW +F SF+ D RSEEFYSLP NL+KYFPS
Sbjct:  411 SYVGAGGLSLIQFCNLNSFRTKFILGFSIFMGLSIPQYFYQYTTLETYGPVRTSATWFNNIINVPFSSKAFVSGILAFFLDTTLPPKDKTTKKDRGLVWWKRFKSFQSDNRSEEFYSLPLNLSKYFPS 538          
BLAST of DN618425 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 5.570e-37
Identity = 76/128 (59.38%), Postives = 89/128 (69.53%), Query Frame = -2
Query:  245 AYVGAGGLSFXQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 628
            AYV + GL   QFCNLNSFR KFILGFSIFIGLSV QYF EY  I+G GPVHT    FN ++ + FSS   V    AF LD T       VR+D GRHWW+KF  +  DTR+EEFY+LP+NLN++FPS
Sbjct:  398 AYVASAGLGLLQFCNLNSFRNKFILGFSIFIGLSVAQYFTEYLFISGRGPVHTRTSAFNVIMQVIFSSAATVGIMAAFLLDCTHSYGHASVRRDSGRHWWEKFRVYHTDTRTEEFYALPYNLNRFFPS 525          
BLAST of DN618425 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.161e-34
Identity = 71/129 (55.04%), Postives = 86/129 (66.67%), Query Frame = -2
Query:  242 AYVGAGGLSFXQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 628
            AY    G S  Q+CNLNS R KFIL  S+F+GLS+PQYF  Y    GFGPVHT    FN MVN+ FSS   VA  +A+ LD T    +  V+KDRG  WW+KF S+K D RSEEFY LP+ L++YFPS+
Sbjct:  399 AYSAGAGFSLLQYCNLNSLRTKFILSISLFLGLSIPQYFRVYEMFFGFGPVHTHSVAFNVMVNVIFSSPATVAAILAYLLDCTHLYWEASVKKDRGWFWWEKFKSYKYDGRSEEFYRLPYGLSRYFPSL 527          
BLAST of DN618425 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.587e-34
Identity = 69/125 (55.20%), Postives = 89/125 (71.20%), Query Frame = -2
Query:  248 VGAGGLSFXQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 622
            V + GLSF QF N+NS R  FI+G S+F+GLS+P+YF +++     GP HT+  WFND +N  F S P VA  VA FLDNTL  K  +  +DRG  WW KF +FKGD+R+EEFY+LPFNLN++FP
Sbjct:  400 VASVGLSFLQFTNMNSLRNLFIVGVSLFLGLSIPEYFRDFSMKALHGPAHTNAGWFNDFLNTIFLSSPMVALMVAVFLDNTLDYK--ETARDRGLPWWAKFRTFKGDSRNEEFYTLPFNLNRFFP 522          
BLAST of DN618425 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.866e-30
Identity = 62/125 (49.60%), Postives = 84/125 (67.20%), Query Frame = -2
Query:  248 VGAGGLSFXQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 622
            V A GLSF QF N+NS R   I G S+F+G+S+PQ+F +Y     +G VHT+  WFN  +N  F S   V   +A F+DNT+  +  + +KDRG  WW KF +F+GD R+EEFY+LPFNLN++FP
Sbjct:  396 VAAVGLSFLQFTNMNSMRNLMITGLSLFLGISIPQFFAQYWDARHYGLVHTNAGWFNAFLNTLFMSPATVGLIIAVFMDNTMEVE--RSKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFP 518          
BLAST of DN618425 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.125e-29
Identity = 62/127 (48.82%), Postives = 79/127 (62.20%), Query Frame = -2
Query:  245 YVGAGGLSFXQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 625
            +V + GLS+ QFCNLNSF +KFILGFS F+ +S+PQYF EY   NG         W  DM+ + F S   VA  +A  LD TL +   + +KD G  WWDKF  +  D R++EFY LP  LNK+FPS
Sbjct:  416 FVSSVGLSYLQFCNLNSFNIKFILGFSFFMAISIPQYFREY--YNGGWRSDHHSNWLEDMIRVIFMSHTTVAAIIAIVLDCTLCRDSDEAKKDCGMKWWDKFRLYNLDVRNDEFYGLPCRLNKFFPS 540          
BLAST of DN618425 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 8.342e-25
Identity = 56/126 (44.44%), Postives = 78/126 (61.90%), Query Frame = -2
Query:  245 VGAGGLSFXQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 622
            V A G+SF QF + NS R  +++G S+F+ LS+ QYF   T+  G+GPV T+G WFND++N  F+S P VA  +A  LDNTL  +       RG  WW  F    GD R++EFYS+P  +N+  P+
Sbjct:  424 VVAVGISFIQFTDTNSMRNMYVIGVSLFLSLSIAQYFLANTSRAGYGPVRTAGGWFNDILNTIFASAPLVATILATILDNTLEARHAS-DDARGIPWWKPFQHRNGDGRNDEFYSMPLRINELMPT 548          
The following BLAST results are available for this feature:
BLAST of DN618425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
NAT6_ARATH1.963e-6687.60Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT5_ARATH1.456e-6179.07Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT7_ARATH2.175e-5776.74Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT8_ARATH4.111e-4867.19Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
NAT4_ARATH5.570e-3759.38Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
LPE1_MAIZE1.161e-3455.04Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT2_ARATH2.587e-3455.20Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
NAT1_ARATH3.866e-3049.60Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT10_ARATH1.125e-2948.82Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
NAT3_ARATH8.342e-2544.44Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_02I21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002I21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618425 ID=DN618425; Name=DN618425; organism=Citrus sinensis; type=EST; length=629bp
AAAGCAAATATAATTTGCTTCATTGCTACTTCGAATCCATCAGTCTCCGG
TTGGATTTACAGAAAAGAAAAAAACAGTTCAACAAATGCTCTAAGGCACA
TCCTATAAAGGAAGGTACTATCTTTTACTGCTATAGCGTGTAATAAGAGA
TTCACAAGAGAGCAATGATGATATTTTGTGTGTTCCCACAAGGACTTTTG
GAAAACTTCCCAAAGAGCAATACATGTTACCGATTGAATCACACAGATGG
GAAATATTTGTTTAAATTGAAGGGCAGGGAGTAAAATTCTTCACTTCTTG
TGTCGCCTTTGAAGGACCAGAACTTGTCCCACCAATGCCTACCCCTGTCT
TTCCTGACTTGACCATCCTTTTTATGCAGTGTGTTGTCGAGGAAAAATGC
CACACAACCAGCAACAAATGGTTCTGACGAGAAAGGAATGTTTACCATAT
CGTTGAACCATCTTCCACTAGTGTGAACTGGACCGAAACCATTAATGGCA
GTGTACTCATTGAAGTATTGNGGCACAGACAGACCGATGAAGATAGAGAA
GCCTAATATGAACTTTACTCGGAAACTGTTGAGGTTACAGAACTGAANGA
AGCTAAGACCTCCAGCACCCACATATGCA
back to top