CX046786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_MOUSE (Structure-specific endonuclease subunit SLX1 OS=Mus musculus GN=Giyd1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26 Identity = 59/141 (41.84%), Postives = 81/141 (57.45%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESFNIKVNYFSTKYSKHSSSCPSLPEHMKV 566 FF YLL PR +G Y+GFTVNP RR+RQHN G + GA RT R PW+MVL I+GFP+ V+AL+FEWAWQHP S + +S + A +++ ML +P W + + + + CP+ P HM + Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIHGFPSAVAALRFEWAWQHPQASRRLTHVGPRLRSEAAFAFHLRVLAHMLRVPPWVRLPLTLRWLRPDF--RHELCPAPPAHMPI 148
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_RAT (Structure-specific endonuclease subunit SLX1 OS=Rattus norvegicus GN=Giyd1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.354e-26 Identity = 58/141 (41.13%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESFNIKVNYFSTKYSKHSSSCPSLPEHMKV 566 FF YLL PR +G Y+GFTVNP RR+RQHN G + GA RT R PW+MVL ++GFP+ V+AL+FEWAWQHP S + +S + +++ ML +P W + V + + CP+ P HM + Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILHGFPSAVAALRFEWAWQHPQASRRLTHVGPRLRSEASFTFHLRVLAHMLRVPPWVRLPLTVRWLRPDF--RHELCPAPPPHMPI 148
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_BOVIN (Structure-specific endonuclease subunit SLX1 OS=Bos taurus GN=GIYD1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.638e-25 Identity = 58/139 (41.73%), Postives = 78/139 (56.12%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESFNIKVNYFSTKYSKHSSSCPSLPEHM 560 FF YLL L PR +G Y+GFTVNP RR++QHNG + GA RT R PWEMVL ++GFP+ V+AL+FEWAWQHP S + + + A +++ ML P W + + + + CP P HM Sbjct: 6 FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGFPSAVAALRFEWAWQHPQASRRLTHVGRRLRGEATFAFHLRVLAHMLRAPPWVRLPLTLRWLRADF--RQDLCPPPPPHM 142
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_NEMVE (Structure-specific endonuclease subunit SLX1 homolog OS=Nematostella vectensis GN=v1g174298 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.226e-25 Identity = 57/143 (39.86%), Postives = 82/143 (57.34%), Query Frame = 3 Query: 144 GFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEI-RCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFS-GVANKIKLAFTMLNLPNWESFNIKVNYFSTKYSKHSSSCPSLPEHMKV 566 GF YLL + P+FKGHTYIG+TVNP RRI+QHNG + + GA +T +++PW M+L ++GFP ++ ALQFEWAWQ P S ++ AA K V ++ +L + W + + + +Y P HM V Sbjct: 9 GFHGVYLLYCVNPKFKGHTYIGYTVNPNRRIKQHNGGVDKGGAYKTSRKKPWNMILIVHGFPNDIIALQFEWAWQKPTVSRRLKSAATKKKPRERPVQYCFRILSELLRVGPWNRLPLHIRWLMREYEMEFDPRCLPPFHMTV 151
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_XENLA (Structure-specific endonuclease subunit slx1 OS=Xenopus laevis GN=giyd1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.174e-23 Identity = 58/149 (38.93%), Postives = 83/149 (55.70%), Query Frame = 3 Query: 144 GFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESFNIKVNYFSTKYSKHSSSCPSLPEHMKV---QVRS 578 GF+ YLL P++KG YIGFTVNP RRI+QHNG + + GA +T R PW+MVL ++GFP +++AL+FEWAWQHP S + K S + + ML + W + + + +Y + P HM + QVR+ Sbjct: 7 GFYGVYLLFCTNPKYKGRIYIGFTVNPERRIQQHNGGKHKGGAWKTSGRGPWDMVLIVHGFPNDIAALRFEWAWQHPHVSRRLTHVPRKTKKQSSFDFHLLVLCHMLRVAPWNRLPLTLRWLRQEYRRELPLLLQPPLHMPLAFGQVRA 155
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_HUMAN (Structure-specific endonuclease subunit SLX1 OS=Homo sapiens GN=GIYD1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.533e-23 Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNW 476 FF YLL L PR++G Y+GFTVN RR++QHNG + GA RT R PWEMVL ++GFP++V+AL+FEWAWQHP S + + + A +++ ML P W Sbjct: 13 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGFPSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPW 123
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_ANOGA (Structure-specific endonuclease subunit SLX1 homolog OS=Anopheles gambiae GN=AGAP002259 PE=3 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23 Identity = 56/132 (42.42%), Postives = 77/132 (58.33%), Query Frame = 3 Query: 147 FFACYLLTSLCP--RFKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVAN---KIKLAFTMLNLPNWESFNIKVNYFSTKYSK 524 F+ YLL S P +F G TYIG+TV+P RRI+QHN GE GA RT R PW MVL ++GFP N+SAL+FEWAWQ P S ++Q K +N ++ ML + W + V +F+ ++ + Sbjct: 10 FYGVYLLVSKSPNPKFAGRTYIGYTVDPNRRIKQHNRGEDAGGARRTSNRGPWTMVLIVHGFPNNISALRFEWAWQQPRVSRRLKQMPELQKKLRKESNFEYNFRILTEMLRMGPWNRLPLVVRWFADEFHR 141
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_LEIIN (Structure-specific endonuclease subunit SLX1 homolog OS=Leishmania infantum GN=LinJ25.1380 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.414e-22 Identity = 49/85 (57.65%), Postives = 61/85 (71.76%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKR-RPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQA 398 F YLLTSL P+ +G YIG+TVNP RR+RQHNGE+ GA RT +R RPW +V C+ GFP + +AL+FEW WQHP S +R A Sbjct: 5 FHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHNGELVNGARRTSRRGRPWTIVCCVSGFPDDRAALKFEWCWQHPTASARLRHA 89
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_DROME (Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila melanogaster GN=CG18271 PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 8.414e-22 Identity = 59/153 (38.56%), Postives = 85/153 (55.56%), Query Frame = 3 Query: 147 FFACYLLTS--LCPRFKGHTYIGFTVNPRRRIRQHNGEIRC---GAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQ--------AAATFKSFSGVANKIKLAFTMLNLPNWESFNIKVNYFSTKYSKHSSSCPSLPEHMKV 566 F+ YLL S L PR++G Y+GFTVNP+RRIRQHN + C GA +T ++ PW MV+ ++GFP N ALQFEWAWQ P S ++ TF ++ ++ ML + W + V + T Y + S +LP+HM++ Sbjct: 23 FYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHN--LGCDFGGARKTSRKGPWLMVMIVHGFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRETFFDYN-----FRILSNMLGVGPWNRLPLTVRWLETDYERPFSK--ALPKHMEI 166
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_CRYNE (Structure-specific endonuclease subunit SLX1 OS=Cryptococcus neoformans GN=SLX1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.435e-21 Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSF---------SGVANKIKLAFTMLNLPNWESFNIKVNYFS 509 F+ACYLL S TY+G T +P RRIRQHNGE++ GA T + RPWEM + +YGFP+ ++ALQFEWAWQ P S +R + + + V K+ +A+ +++L + + V +F+ Sbjct: 28 FYACYLLRSKATANSNRTYVGSTPDPPRRIRQHNGELKQGAWSTSRHRPWEMQMIVYGFPSKLAALQFEWAWQKPELSRHLRIRGEDQEYYHIFTKDARRNWVERKVCVAYALISLTPFNRLPLHVRFFN 157 The following BLAST results are available for this feature:
BLAST of CX046786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046786 ID=CX046786; Name=CX046786; organism=Citrus sinensis; type=EST; length=844bpback to top |