CX046780

Overview
NameCX046780
Unique NameCX046780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length124
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX046780 vs. ExPASy Swiss-Prot
Match: M030_ARATH (Uncharacterized mitochondrial protein AtMg00030 OS=Arabidopsis thaliana GN=AtMg00030 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.123e-17
Identity = 39/40 (97.50%), Postives = 39/40 (97.50%), Query Frame = -3 
Query:    3 KFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVL 122
            KF KSKERRLATELGYGFPIGDPWITDGISPWPFASESVL
Sbjct:    6 KFSKSKERRLATELGYGFPIGDPWITDGISPWPFASESVL 45
The following BLAST results are available for this feature:
BLAST of CX046780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
M030_ARATH4.123e-1797.50Uncharacterized mitochondrial protein AtMg00030 OS... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_10B06_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10B06-D11-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046780 ID=CX046780; Name=CX046780; organism=Citrus sinensis; type=EST; length=124bp
GGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGAT
CCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGC
GCTCTTTGGACTTTTCAAACTTAG
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