DN618418

Overview
NameDN618418
Unique NameDN618418
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618418 vs. ExPASy Swiss-Prot
Match: PT2K3_SOLTU (Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.827e-47
Identity = 101/204 (49.51%), Postives = 133/204 (65.20%), Query Frame = 1
Query:   37 GKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDG-PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLI 645
            G+ +TVLSIDGGG+KGIIP TIL FLE +LQ++D   +AR+ADYFD++ GTSTGGL+  M+T PN++ RP  AAKDI  FYFEH P IF   S G  F             PMYDGKY   + +E L +  +   LT + I +FDIK  +PVIF+ +++ K    +A++ DIC  T+AAPTY P H+FVT  S  GD   F+L+
Sbjct:   26 GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIFN--SSGSIF------------GPMYDGKYFLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFVTHTS-NGDKYEFNLV 214          
BLAST of DN618418 vs. ExPASy Swiss-Prot
Match: PAT05_SOLTU (Patatin-05 OS=Solanum tuberosum GN=pat1-k1 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.827e-47
Identity = 96/204 (47.06%), Postives = 135/204 (66.18%), Query Frame = 1
Query:   37 GKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDG-PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLI 645
            G+ +TVLSIDGGG+KGIIPG IL FLE +LQ +D   +AR+ADYFD++ GTSTGGL+  M+T PN++ RP  AAKDI  FYF+H P IF              SS  ++  P YDGKY+  + +E L +  +   LT + I +FDIK  +PVIF+ +++ K    +A+++DIC  T+AAPTY P H+F T +++ GD   F+L+
Sbjct:   26 GEMVTVLSIDGGGIKGIIPGIILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIFN-------------SSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMSDICYSTAAAPTYFPPHYFAT-NTSNGDKYEFNLV 215          
BLAST of DN618418 vs. ExPASy Swiss-Prot
Match: PAT13_SOLTU (Patatin-13 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.304e-47
Identity = 95/204 (46.57%), Postives = 135/204 (66.18%), Query Frame = 1
Query:   37 GKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDG-PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLI 645
            G+ +TVLS+DGGG+KGIIPG IL FLE +LQ +D   +AR+ADYFD++ GTSTGGL+  M+T PN++ RP  AAKDI  FYF+H P IF              SS  ++  P YDGKY+  + +E L +  +   LT + I +FDIK  +PVIF+ +++ K    +A+++DIC  T+AAPTY P H+F T +++ GD   F+L+
Sbjct:   26 GEMVTVLSVDGGGIKGIIPGIILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIFN-------------SSTGQFFGPKYDGKYLMQVPQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMSDICYSTAAAPTYFPPHYFAT-NTSNGDKYEFNLV 215          
BLAST of DN618418 vs. ExPASy Swiss-Prot
Match: PAT03_SOLTU (Patatin-03 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.075e-46
Identity = 95/204 (46.57%), Postives = 135/204 (66.18%), Query Frame = 1
Query:   37 GKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDG-PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLI 645
            G+ +TVLSIDGGG+KGIIPG IL FLE +LQ +D   +AR+ADYFD++ GTSTGGL+  M+T PN++ RP  AAKDI  FYF+H P IF              SS  ++  P YDGKY+  + +E L +  +   LT + I +FDIK  +PVIF+ +++ +    +A+++DIC  T+AAPTY P H+F T +++ GD   F+L+
Sbjct:   26 GEMVTVLSIDGGGIKGIIPGIILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIFN-------------SSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLARSPELDAKMSDICYSTAAAPTYFPPHYFAT-NTSNGDKYEFNLV 215          
BLAST of DN618418 vs. ExPASy Swiss-Prot
Match: PATM2_SOLTU (Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.404e-46
Identity = 99/203 (48.77%), Postives = 133/203 (65.52%), Query Frame = 1
Query:   40 KKITVLSIDGGGVKGIIPGTILAFLESRLQDLDG-PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLI 645
            K +TVLSIDGGG+KGIIP  IL FLE +LQ++D   +AR+ADYFD++ GTSTGGL+  M+T PN++ RP  AAKDI  FYFEH P IF       N+  SII        PMYDGKY+  + +E L +  +   LT + I +FDIK  +PVIF+ +++ K    +A++ DIC  T+AAP Y P H+F+T  S  GD   F+L+
Sbjct:   27 KMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF-------NYSGSIIG-------PMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLV 214          
BLAST of DN618418 vs. ExPASy Swiss-Prot
Match: PT2K1_SOLTU (Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.834e-46
Identity = 98/204 (48.04%), Postives = 132/204 (64.71%), Query Frame = 1
Query:   37 GKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDG-PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLI 645
            G+ +TVLSIDGGG+KGIIP TIL FLE +LQ++D   +AR+ADYFD++ GTSTGGL+  M+T PN++ RP  AAKDI  FYFEH P IF              +S      PMYDGKY+  + +E L +  +   LT + I +FDIK  +PVIF+ +++ K    +A++ DIC  T+AAP Y P H+FVT  S  GD   F+L+
Sbjct:   14 GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF--------------NSSGTIFGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFVTHTS-NGDRYEFNLV 202          
BLAST of DN618418 vs. ExPASy Swiss-Prot
Match: PATT5_SOLTU (Patatin-T5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.834e-46
Identity = 98/204 (48.04%), Postives = 134/204 (65.69%), Query Frame = 1
Query:   37 GKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDG-PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLI 645
            G+ +TVLSIDGGG+KGIIP TIL FLE +LQ++D   +AR+ADYFD++ GTSTGGL+  M+T PN+  RP  AAKDI  FYFEH PKIF   S G  F             P YDGKY+  + +E L +  +   LT + I +FDIK  +PVIF+ +++ K    +A++ DIC  T+AAPT+ P H+F T +++ GD   F+L+
Sbjct:   26 GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTSTGGLLTAMITTPNETNRPFAAAKDIVPFYFEHGPKIFQ--SSGSIF------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTFFPPHYFAT-NTSNGDKYEFNLV 214          
BLAST of DN618418 vs. ExPASy Swiss-Prot
Match: PT2K4_SOLTU (Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.396e-46
Identity = 98/204 (48.04%), Postives = 134/204 (65.69%), Query Frame = 1
Query:   37 GKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDG-PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLI 645
            G+ +TVLSIDGGG+KGIIP  IL FLE +LQ++D   +AR+ADYFD++ GTSTGGL+  M+T PN++ RP  AAKDI  FYFEH P IF       N+  SI+        PMYDGKY+  + +E L +  +   LT + I +FDIK  +PVIF+ +++ +    +A++ DIC  T+AAP Y P H+FVT  S  GD   F+L+
Sbjct:   14 GEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF-------NYSGSILG-------PMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDAKMYDICYSTAAAPIYFPPHYFVTHTS-NGDRYEFNLV 202          
BLAST of DN618418 vs. ExPASy Swiss-Prot
Match: PT2K2_SOLTU (Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.396e-46
Identity = 98/204 (48.04%), Postives = 133/204 (65.20%), Query Frame = 1
Query:   37 GKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDG-PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLI 645
            G+ +TVLSIDGGG+KGIIP  IL FLE +LQ++D   +AR+ADYFD++ GTSTGGL+  M+T PN++ RP  AAKDI  FYFEH P IF       N+  SI         PMYDGKY+  + +E L +  +   LT + I +FDIK  +PVIF+ +++ K    +A++ DIC  T+AAP Y P H+F+T  S  GD   F+L+
Sbjct:   26 GEMVTVLSIDGGGIKGIIPAVILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIIPFYFEHGPHIF-------NYSGSIFG-------PMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPMYFPPHYFITHTS-DGDIYEFNLV 214          
BLAST of DN618418 vs. ExPASy Swiss-Prot
Match: PT3K1_SOLTU (Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.086e-46
Identity = 96/204 (47.06%), Postives = 133/204 (65.20%), Query Frame = 1
Query:   37 GKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDG-PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLI 645
            G+ +TVLSIDGGG+KGIIP TIL FLE +LQ++D   +AR+ADYFD++ GT TGGL+  M+T PN++ RP  AAKDI  FYF+H PKIF               S    V P YDGKY+  + +E L +  +   LT + I +FDIK  +PVIF+ +++ K    +A++ DIC  T+AAPTY P H+F T +++ GD   F+L+
Sbjct:   14 GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTGTGGLLTAMITTPNENNRPFAAAKDIIPFYFDHGPKIFEP-------------SGFHLVEPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKTPELDAKMYDICYSTAAAPTYFPPHYFAT-NTSNGDQYDFNLV 203          
The following BLAST results are available for this feature:
BLAST of DN618418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PT2K3_SOLTU4.827e-4749.51Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 ... [more]
PAT05_SOLTU4.827e-4747.06Patatin-05 OS=Solanum tuberosum GN=pat1-k1 PE=1 SV... [more]
PAT13_SOLTU6.304e-4746.57Patatin-13 OS=Solanum tuberosum PE=2 SV=1[more]
PAT03_SOLTU1.075e-4646.57Patatin-03 OS=Solanum tuberosum PE=2 SV=1[more]
PATM2_SOLTU1.404e-4648.77Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K1_SOLTU1.834e-4648.04Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 ... [more]
PATT5_SOLTU1.834e-4648.04Patatin-T5 OS=Solanum tuberosum PE=1 SV=1[more]
PT2K4_SOLTU2.396e-4648.04Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 ... [more]
PT2K2_SOLTU2.396e-4648.04Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 ... [more]
PT3K1_SOLTU4.086e-4647.06Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02I17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002I17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618418 ID=DN618418; Name=DN618418; organism=Citrus sinensis; type=EST; length=647bp
TCAAAACTCAAAATGATCGCTAGAACCATTGCCAAAGGCAAGAAAATAAC
CGTGCTAAGCATTGATGGAGGCGGTGTTAAAGGCATCATTCCTGGCACCA
TTTTAGCCTTTCTTGAATCCAGGCTTCAGGATTTGGATGGACCCAATGCG
AGAATAGCAGACTATTTTGATATAGTAGCAGGAACAAGCACAGGTGGGCT
AATAGGCACCATGCTTACAGCTCCCAACAAGGACGGCAGACCTATGTATG
CGGCTAAGGATATCAACAACTTCTATTTTGAGCACTGTCCTAAAATTTTC
CCTCAATTATCAAGGGGCGGAAACTTTCTAAGATCAATTATAAGCTCTTT
GAGTAAGTGGGTACGGCCAATGTATGATGGGAAGTACATACGGAGTCTTA
CAAAGGAGATACTAGAAGACATTACTATCAAAGACACCCTAACAAATTTG
ATCATTCCAACTTTTGACATCAAGCGACTTCAGCCAGTGATCTTCTCAAG
CAACGATGTGAAAAAAGGTGCATTGAAGAATGCCCGGCTAGCTGATATAT
GCGTTGGCACCTCTGCAGCTCCCACCTACTTGCCGGCTCACCATTTTGTG
ACAAAAGATTCAACAACCGGCGACACCTGCAGTTTTGATCTCATTGA
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