DN618408

Overview
NameDN618408
Unique NameDN618408
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618408 vs. ExPASy Swiss-Prot
Match: Y2168_ARATH (Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.212e-58
Identity = 122/157 (77.71%), Postives = 133/157 (84.71%), Query Frame = -3
Query:  190 GPEVGKANIADKVGFRVFCLLNATSLFISLAVVVVQITLVAWDTTAQKQVVSVVNKLMWTVCACTCAAFLSIAFMVVGNGHSWMAITITLMGAPILVGTLASMCYFVFRQRFGLFRNDSQRRIRRASGSKSFSWSVYSANMSDVDEYNFDMEKIYAL 660
            G  VG+ANIA + GFRVFCLLNATSLFISLAVVVVQITLVAWDT AQK+VVSVVNKLMW  CACT  AFL+IAF VVG G+SWMAITITL+GAPILVGTLASMCYFVFRQRF    NDSQRRIRR S SKSFSWS YS ++SD ++ + D EKI AL
Sbjct:  380 GSHVGQANIAGRTGFRVFCLLNATSLFISLAVVVVQITLVAWDTRAQKKVVSVVNKLMWAACACTFGAFLAIAFAVVGKGNSWMAITITLLGAPILVGTLASMCYFVFRQRF-RSGNDSQRRIRRGS-SKSFSWS-YSHHVSDFEDES-DFEKIIAL 532          
BLAST of DN618408 vs. ExPASy Swiss-Prot
Match: Y3236_ARATH (Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.482e-24
Identity = 60/142 (42.25%), Postives = 88/142 (61.97%), Query Frame = -3
Query:  226 GKANIADKVGFRVFCLLNATSLFISLAVVVVQITLVAWDTTAQKQVVSVVNKLMWTVCACTCAAFLSIAFMVVGNGHSWMAITITLMGAPILVGTLASMCYFVFRQRFGLFRNDSQR-RIRRASGSKSFSWSVYSANMSDVD 648
            G A +  +  F++F + NA +LF SLAVVVVQITLV  +T A+K+VV V+NKLMW    CT  AFL+ +++VVG  + W A  +T++G  I+ G L +M Y+V + +    R  S R +++ A  S S SW     + S+VD
Sbjct:  448 GSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGETKAEKRVVEVINKLMWLASMCTSVAFLASSYIVVGRKNEWAAELVTVVGGVIMAGVLGTMTYYVVKSK----RTRSMRKKVKSARRSGSNSWHHSDFSNSEVD 585          
BLAST of DN618408 vs. ExPASy Swiss-Prot
Match: Y5262_ARATH (Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.204e-20
Identity = 47/111 (42.34%), Postives = 75/111 (67.57%), Query Frame = -3
Query:  328 GPEVGKANIADKVGFRVFCLLNATSLFISLAVVVVQITLVAWDTTAQKQVVSVVNKLMWTVCACTCAAFLSIAFMVVGNGHSWMAITITLMGAPILVGTLASMCYFVFRQR 660
            G  +G+A  A +  F +F + ++ +LFISLAVVVVQ ++V  +  A+KQ+++++NKLMW  C     AF+S++F+VVG     +A+ +T +GA I+V TL +MCY+V   R
Sbjct:  385 GYSLGEARAAPRPEFLIFVVFDSFALFISLAVVVVQTSVVVIERRAKKQMMAIINKLMWMACIMISVAFVSLSFVVVGEKEKPLAVGVTAIGALIMVSTLGTMCYWVIANR 495          
The following BLAST results are available for this feature:
BLAST of DN618408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y2168_ARATH8.212e-5877.71Ankyrin repeat-containing protein At2g01680 OS=Ara... [more]
Y3236_ARATH3.482e-2442.25Ankyrin repeat-containing protein At3g12360 OS=Ara... [more]
Y5262_ARATH5.204e-2042.34Ankyrin repeat-containing protein At5g02620 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02I11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002I11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618408 ID=DN618408; Name=DN618408; organism=Citrus sinensis; type=EST; length=662bp
TTTTTTTTTTTTTTTTTCGTGGAACTTCCTCTTTACATAACATTGAAGCT
CAAAGGCGCATACATAATACGCTTTATAATAGTGGTTAATCCCGGTGAAC
AACAGTTACACAGAGCAAACACCAACAACATAAAACTTGTGCAGCTGAAC
CAGCTTTTTCTAGCATCTGGCCATAGGGTAGTGTGTTTACAGAGCATATA
TTTTCTCCATGTCAAAGTTATACTCATCAACGTCTGACATATTTGCGGAG
TATACTGACCATGAGAATGACTTACTTCCACTTGCCCTTCTAATGCGTCT
CTGAGAATCGTTGCGGAAAAGCCCAAAACGTTGTCGGAAAACAAAATAAC
ACATACTTGCAAGTGTCCCAACAAGAATCGGCGCTCCCATTAGGGTTATG
GTGATAGCCATCCATGAATGTCCGTTTCCCACAACCATAAAAGCTATAGA
CAGAAATGCTGCACAAGTGCAAGCGCATACTGTCCACATTAACTTGTTCA
CTACTGATACAACCTGCTTCTGAGCAGTAGTATCCCAGGCTACCAAAGTG
ATCTGAACCACTACAACAGCTAGAGATATGAAAAGAGACGTTGCATTTAA
AAGGCAGAACACGCGGAAACCTACTTTGTCAGCAATGTTAGCCTTTCCTA
CTTCTGGTCCAT
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