DN618401

Overview
NameDN618401
Unique NameDN618401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618401 vs. ExPASy Swiss-Prot
Match: SUOX_ARATH (Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.068e-75
Identity = 125/167 (74.85%), Postives = 147/167 (88.02%), Query Frame = -2
Query:  137 ILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRCQKTGFPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM 637
            ++AEE QGFFMQKDYKMFPPSVNWDNINW SRRP MDFPVQ  ICS+EDV ++KPGK  + GYAVSGGGRGIERVDIS+DGGKNWVEASR Q+ G  YI++H SSDKWAWV FE  ID+  +T+++AKAVD+AANVQPE+VE++WNLRGVLNTSWHRV +R+GHSN+
Sbjct:  227 VIAEESQGFFMQKDYKMFPPSVNWDNINWSSRRPQMDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIERVDISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQTTEVIAKAVDSAANVQPENVESVWNLRGVLNTSWHRVLLRLGHSNL 393          
BLAST of DN618401 vs. ExPASy Swiss-Prot
Match: SUOX_MOUSE (Sulfite oxidase, mitochondrial OS=Mus musculus GN=Suox PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.052e-30
Identity = 66/163 (40.49%), Postives = 96/163 (58.90%), Query Frame = -2
Query:  152 AEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRCQKTGFPYIADHMSSDKWAWVFFEVIIDIP---HSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 631
            +EE    + ++DYK F PSV+WD +N+     + + P+Q  I   +D  +++ G+  + GYA SGGGR + RVD+SVDGG  W EA    +   P  A       WAW  +++   +P       I+ KAVD + NVQP++V  IWNLRGVL+ +WHRV V+V
Sbjct:  389 SEESYSHWQRRDYKGFSPSVDWDTVNFDLAPSIQELPIQSAITQPQDGAIVESGEVTIKGYAWSGGGRAVIRVDVSVDGGLTWQEAELEGEEQCPRKA-------WAWRIWQLKAQVPAEQKELNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVQV 544          
BLAST of DN618401 vs. ExPASy Swiss-Prot
Match: SUOX_RAT (Sulfite oxidase, mitochondrial OS=Rattus norvegicus GN=Suox PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.755e-29
Identity = 64/163 (39.26%), Postives = 95/163 (58.28%), Query Frame = -2
Query:  152 AEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRCQKTGFPYIADHMSSDKWAWVFFEVIIDIP---HSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 631
            +EE    + ++DYK F PSV+WD +++     + + P+Q  I   +D   ++ G+  + GYA SGGGR + RVD+S+DGG  W EA    +   P  A       WAW  +++   +P       I+ KAVD + NVQP++V  IWNLRGVL+ +WHRV V+V
Sbjct:  389 SEESYSHWQRRDYKGFSPSVDWDTVDFDLAPSIQELPIQSAITQPQDGTTVESGEVIIKGYAWSGGGRAVIRVDVSMDGGLTWQEAELEGEEQHPRKA-------WAWRIWQLKAHVPAEQKELNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVQV 544          
BLAST of DN618401 vs. ExPASy Swiss-Prot
Match: SUOX_CHICK (Sulfite oxidase OS=Gallus gallus GN=SUOX PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 7.517e-29
Identity = 64/156 (41.03%), Postives = 91/156 (58.33%), Query Frame = -2
Query:  167 EECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRCQKTGFPYIADHMSSDKWAWVFFEVIIDIPHST--QIVAKAVDTAANVQPESVETIWNLRGVLNTSWHR 628
            +E    + Q DYK F P V+WD +++++   + + PVQ  +        + PG+  V GYA SGGGR + RVD+S+DGG+ W  A        P  A       WAW  +E+ + +   T  +IV KAVD++ NVQP+SV  IWNLRGVL+T+WHR
Sbjct:  311 DESPSRWQQNDYKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVPPGELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRA-------WAWALWELTVPVEAGTELEIVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHR 459          
BLAST of DN618401 vs. ExPASy Swiss-Prot
Match: SUOX_MACFA (Sulfite oxidase, mitochondrial OS=Macaca fascicularis GN=SUOX PE=2 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 2.856e-28
Identity = 66/162 (40.74%), Postives = 91/162 (56.17%), Query Frame = -2
Query:  152 EECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRCQKTGFPYIADHMSSDKWAWVFFEVIIDIP---HSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 628
            EE    + ++DYK F PSV+WD +++ S   + + PVQ  I    D   ++ G+  + GYA SGGGR + RVD+S+DGG  W  A    +   P  A       WAW  +++   +P       IV KAVD   NVQP++V  IWNLRGVL+ +WHRV V V
Sbjct:  389 EESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEPRDGETVESGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRPRKA-------WAWRLWQLQAPVPAGQKELNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVFV 543          
BLAST of DN618401 vs. ExPASy Swiss-Prot
Match: SUOX_HUMAN (Sulfite oxidase, mitochondrial OS=Homo sapiens GN=SUOX PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.363e-28
Identity = 65/162 (40.12%), Postives = 91/162 (56.17%), Query Frame = -2
Query:  152 EECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRCQKTGFPYIADHMSSDKWAWVFFEVIIDIP---HSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 628
            EE    + ++DYK F PSV+W+ +++ S   + + PVQ  I    D   ++ G+  + GYA SGGGR + RVD+S+DGG  W  A    +   P  A       WAW  +++   +P       IV KAVD   NVQP++V  IWNLRGVL+ +WHRV V V
Sbjct:  389 EESYSHWQRRDYKGFSPSVDWETVDFDSAPSIQELPVQSAITEPRDGETVESGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRPRKA-------WAWRLWQLKAPVPAGQKELNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVYV 543          
BLAST of DN618401 vs. ExPASy Swiss-Prot
Match: SUOX_DROME (Probable sulfite oxidase, mitochondrial OS=Drosophila melanogaster GN=CG7280 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.739e-20
Identity = 59/169 (34.91%), Postives = 87/169 (51.48%), Query Frame = -2
Query:  152 EECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMK----PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRCQKTGFPYIADHMSSDKWAWVFFEVIIDIPHS------TQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 628
            +E    + Q DYK F PS +WD +++     +   PV   IC+ +    +K     G   V GYA SGGGR I RVD++ D G +W  A   Q+       +      + W  +   + +  +       +I AKAVD+A NVQPE  E IWNLRGVL  ++H+V+V++
Sbjct:  411 KESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPVTSAICTPQPGARVKVDDDEGHITVRGYAWSGGGRKIVRVDLTNDEGVSWHVAELEQE-------EMPDGRHYGWSLWTARLPVSEAQRRAGDVEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKVKVKI 572          
BLAST of DN618401 vs. ExPASy Swiss-Prot
Match: NIA_LOTJA (Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.830e-14
Identity = 48/176 (27.27%), Postives = 87/176 (49.43%), Query Frame = -2
Query:  152 ILAEECQGFFMQKDYKMFPPSVNWDNIN-----WKSRRPLMDFPVQCVICS-----LEDVNVMKPGKA-KVSGYAVSGGGRGIERVDISVDGGKNWVEASRCQKTGFPYIADHMSSDKWAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 637
            +  EEC G +  KD ++ P  V+ +  N     +K    + +  +  VI +     +  +N     +   + GY+ SGGGR + RV++++DGG+ W   +  Q+        +     W W F+ +   ++D+  + +I  +A D A N QPE++  IWN+ G++N  W RV+  V
Sbjct:  297 VTEEECDGHYHYKDNRVLPSHVDAELANEEGWWYKPEYIINELNINSVITTPCHDEILPINAWTTQRPYTLRGYSYSGGGRKVTRVEVTLDGGETWFVCALDQQE-----KPNKYGKYWCWCFWSLEVEVLDLLGTKEIAVRAWDEALNTQPENL--IWNVMGMMNNCWFRVKTNV 465          
BLAST of DN618401 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.390e-13
Identity = 50/175 (28.57%), Postives = 83/175 (47.43%), Query Frame = -2
Query:  152 EECQGFFMQKDYKMFPPSVNWDNIN-----WKSRRPLMDFPVQCVICSLEDVNVMKPGK------AKVSGYAVSGGGRGIERVDISVDGGKNWVEAS--RCQKTGFPYIADHMSSDKWAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 628
            ++ Q  +  KD K+FP  V+ +  N     +K    + +  +  VI +     ++            + GYA SGGGR + RV++++DGG+ W   S  R +K        +     W W F+ +   ++DI  + +I  +A D A N QPE +  IWN  G++N  W RV+  V
Sbjct:  295 QQSQSHYHYKDNKLFPSHVDAELANEEDWWYKPEYIINEVNINSVITTPSHQEILPINSWTTQMPYSMRGYAYSGGGRKVTRVEVTLDGGETWQVCSVERLEK-------PNKYGKYWCWCFWSLEVEVLDILGAKEIAVRAWDEAQNTQPEKL--IWNTMGMINNCWFRVKTNV 460          
BLAST of DN618401 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13
Identity = 48/181 (26.52%), Postives = 87/181 (48.07%), Query Frame = -2
Query:  152 ILAEECQGFFMQKDYKMFPPSVNWDNIN-----WKSRRPLMDFPVQCVICS-----LEDVNVMKPGKA-KVSGYAVSGGGRGIERVDISVDGGKNWVEASRCQKTGFPYIADHMSSDK-----WAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 637
            +  +E + ++  KD ++ PP V+ +  N     +K    + +  +  VI +     +  +N     +   + GYA SGGG+ + RV++++DGG+ W   S C         DH          W W F+ +   ++D+  + +I  +A D   N QPE +  IWN+ G++N  W RV++ V
Sbjct:  313 VTTQESESYYHYKDNRVLPPHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEILPINAWTTQRPYTLRGYAYSGGGKKVTRVEVTLDGGETW---SVC-------TLDHPEKPTKYGKYWCWCFWSLEVEVLDLLSAKEIAVRATDETLNTQPEKL--IWNVMGMMNNCWFRVKMNV 481          
The following BLAST results are available for this feature:
BLAST of DN618401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
SUOX_ARATH4.068e-7574.85Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=... [more]
SUOX_MOUSE3.052e-3040.49Sulfite oxidase, mitochondrial OS=Mus musculus GN=... [more]
SUOX_RAT5.755e-2939.26Sulfite oxidase, mitochondrial OS=Rattus norvegicu... [more]
SUOX_CHICK7.517e-2941.03Sulfite oxidase OS=Gallus gallus GN=SUOX PE=1 SV=3[more]
SUOX_MACFA2.856e-2840.74Sulfite oxidase, mitochondrial OS=Macaca fascicula... [more]
SUOX_HUMAN6.363e-2840.12Sulfite oxidase, mitochondrial OS=Homo sapiens GN=... [more]
SUOX_DROME3.739e-2034.91Probable sulfite oxidase, mitochondrial OS=Drosoph... [more]
NIA_LOTJA6.830e-1427.27Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA... [more]
NIA1_PHAVU3.390e-1328.57Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
NIA_SOLLC7.552e-1326.52Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02I08_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002I08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618401 ID=DN618401; Name=DN618401; organism=Citrus sinensis; type=EST; length=638bp
CCCAGTGGAATATCATCAACAAGCTTAAACACATTATTTTGTGTGGACAG
CACATCGCGAAGAGCCAACTACTTATTACAGTATGTCAAGAAACTATTCA
ACTTCTTTATTTTTGTTTCTATTATGTTTAAGTTTACATATTTGAGTGTC
CAACTCGAACCTGAACCCGGTGCCATGAGGTGTTAAGTACGCCTCTCAAG
TTCCAGATGGTTTCCACACTTTCAGGTTGGACATTTGCAGCTGTGTCAAC
CGCTTTGGCAACTATTTGAGTGCTATGTGGAATATCGATAATGACTTCAA
AAAATACCCATGCCCATTTATCACTGCTCATGTGATCTGCAATATATGGA
AAACCAGTCTTCTGGCATCTGGAGGCTTCTACCCAGTTTTTACCACCATC
AACAGATATATCTACTCTCTCAATTCCACGCCCACCTCCTGATACCGCAT
ATCCACTAACTTTTGCCTTTCCAGGCTTCATCACATTCACGTCCTCTAGT
GAGCAAATTACGCACTGGACAGGGAAATCCATTAGTGGTCTCCTGGACTT
CCAATTAATGTTATCCCAATTCACAGATGGTGGAAACATTTTGTAGTCCT
TTTGCATAAAGAAGCCCTGGCATTCCTCTGCAAGGATG
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