DN618400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618400 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.654e-28 Identity = 60/91 (65.93%), Postives = 72/91 (79.12%), Query Frame = -2 Query: 285 VQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 557 VQ+TLSTHSPDEEYL ++ ++ HW D +V+ F+KFS L +IEK IN RNKD +LK R GAG+PPYELLLP+S GVTGRGIPNSISI Sbjct: 827 VQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917
BLAST of DN618400 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.038e-22 Identity = 53/91 (58.24%), Postives = 66/91 (72.53%), Query Frame = -2 Query: 285 VQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 557 V DTLSTHSPDEEY+G+ Q S W D E+++ F FSA + IEK I+ RN+D + RCGAG+ PYEL+ PSS PGVT RG+PNS+SI Sbjct: 837 VVDTLSTHSPDEEYIGE-RQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 926
BLAST of DN618400 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.946e-22 Identity = 53/91 (58.24%), Postives = 64/91 (70.33%), Query Frame = -2 Query: 285 VQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 557 V DTLSTHSPDEEY+G+ Q S W D E++ F F+A + IEK I RN D + RCGAG+ PYELL+PSS PGVT RG+PNS+SI Sbjct: 830 VVDTLSTHSPDEEYIGE-RQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919
BLAST of DN618400 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.363e-21 Identity = 52/89 (58.43%), Postives = 62/89 (69.66%), Query Frame = -2 Query: 285 DTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 551 D LS+HSPDEEY+G+ + W+ +P V F+KFS L+E E I+ RN + K RCGAGI PYELL P S PGVTGRGIPNSISI Sbjct: 810 DILSSHSPDEEYMGEYAE--PAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896
BLAST of DN618400 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.075e-19 Identity = 51/91 (56.04%), Postives = 62/91 (68.13%), Query Frame = -2 Query: 285 VQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 557 V D LS+HS DEEYLG + W +D V +D F+A L+EIE +I+ RNKD +LK RCGAGI PY+L+ P S GVTG GIPNS SI Sbjct: 836 VLDVLSSHSTDEEYLG--GEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924
BLAST of DN618400 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.126e-19 Identity = 51/91 (56.04%), Postives = 61/91 (67.03%), Query Frame = -2 Query: 285 VQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 557 V D LSTHS DEEYLG + W +D V + F+A L+EIE +I+ RNKD +LK RCGAGI PY+L+ P S GVTG GIPNS SI Sbjct: 853 VLDVLSTHSTDEEYLG--GEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941
BLAST of DN618400 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 5.333e-19 Identity = 50/92 (54.35%), Postives = 58/92 (63.04%), Query Frame = -2 Query: 285 VQDTLSTHSPDEEYLGQVNQLHS-HWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 557 V DTLSTHSPDEEYLG+ W D + F+A++ E+ I RN D K RCGAG+ PYELL PSS PGVT RG+PNSISI Sbjct: 827 VVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 918
BLAST of DN618400 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 5.333e-19 Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = -2 Query: 285 VQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 557 V DTLSTHS DEEYLG+ + W DP L +F+A++ E+ I RN D + RCGAG+ PYEL+ PSSGPG+T RG+PNS++I Sbjct: 811 VIDTLSTHSADEEYLGE--RPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 899
BLAST of DN618400 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.026e-18 Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = -2 Query: 285 DTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 551 D LSTHSPDEEY+G+ Q + W N+P + F++F L+ +E +I+ RN + LK R GAG+ YELL P+S GVTG G+P SISI Sbjct: 810 DLLSTHSPDEEYIGE--QQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896
BLAST of DN618400 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.822e-17 Identity = 48/89 (53.93%), Postives = 56/89 (62.92%), Query Frame = -2 Query: 285 DTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 551 + LSTHS DE YLGQ + W + E L F+KF ++EIEK I+ RN D LK R G PY LL PSS GVTGRGIPNS+SI Sbjct: 773 EILSTHSSDEVYLGQRDS--KEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859 The following BLAST results are available for this feature:
BLAST of DN618400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618400 ID=DN618400; Name=DN618400; organism=Citrus sinensis; type=EST; length=558bpback to top |