DN618393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618393 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2) HSP 1 Score: 290.812 bits (743), Expect = 3.131e-78 Identity = 135/164 (82.32%), Postives = 149/164 (90.85%), Query Frame = 1 Query: 76 MTPALILASAVPDPELVVHEVHKSINASRRNLGYLSCGMGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 567 ++P I ++ V +PELVV EV++ INASRRNLG LSCG GNPIDDCWRCDP WEKNRQRLADCAIGFGK+A+GGRDG+IYVVTD D DVVNPKPGTLR+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGG CIT+QYVTNIIIHG+NIHD Sbjct: 20 LSPTFIASTPVSEPELVVQEVNEKINASRRNLGVLSCGTGNPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHD 183
BLAST of DN618393 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2) HSP 1 Score: 284.263 bits (726), Expect = 2.931e-76 Identity = 135/163 (82.82%), Postives = 149/163 (91.41%), Query Frame = 1 Query: 88 LILASAVPDPELVVHEVHKSINAS---RRNLGYLSCGMGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 567 L L+S VPDPE VV EVHKSINAS RR LGYLSC GNPIDDCWRCDP+WE++RQRLADCAIGFGKNA+GGRDGRIYVVTD G+ + V+PKPGTLR+AV+QDEPLWIIF RDMTI+LKEELIMNSFKTIDGRGASVHI+GGPCITIQYVTNIIIHG++IHD Sbjct: 21 LFLSSPVPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHD 183
BLAST of DN618393 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 5.527e-75 Identity = 133/162 (82.10%), Postives = 146/162 (90.12%), Query Frame = 1 Query: 94 LASAVP--DPELVVHEVHKSINAS--RRNLGYLSCGMGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 567 LAS++P DPELVV EVH+ IN S RR LG+ SCG GNPIDDCWRCD +WEKNR+RLADC IGFGKNA+GGRDG IYVVTDPG+ D VNP+PGTLRYAVIQDEPLWIIF RDMTI+LKEELIMNSFKT+DGRGASVHI+GGPCITIQYVTNIIIHGL+IHD Sbjct: 44 LASSLPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHD 205
BLAST of DN618393 vs. ExPASy Swiss-Prot
Match: PEL_ZINEL (Pectate lyase OS=Zinnia elegans PE=1 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 1.152e-72 Identity = 126/163 (77.30%), Postives = 142/163 (87.12%), Query Frame = 1 Query: 85 ALILASAVPD--PELVVHEVHKSINASRRNLGYLSCGMGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 567 +L +AS+ P P +V+EVHKSINASRRNLGYLSCG GNPIDDCWRCDPNW NRQRLADCAIGFGKNA+GGR+GRIYVVTDPG+ D VNP PGTLRYAVIQDEPLWIIF RDM I+L++EL+MNS KTIDGRG +VHI GPCITI Y +NIIIHG++IHD Sbjct: 14 SLAIASSSPSRTPHAIVNEVHKSINASRRNLGYLSCGTGNPIDDCWRCDPNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEPLWIIFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHD 176
BLAST of DN618393 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.364e-65 Identity = 113/158 (71.52%), Postives = 131/158 (82.91%), Query Frame = 1 Query: 112 DPELVVHEVHKSINAS------RRNLGYLSCGMGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 567 DP++V EV K + S RR LG+ SCG GNPIDDCWRCD NW KNR+RLADC IGFG+NA+GGRDGR Y+VTDP D DVVNPKPGTLR+AVIQ+EPLWI+F RDM I LK+ELIMNSFKTID RG++VHIA G CITIQ++TN+IIHGL+IHD Sbjct: 88 DPDMVADEVAKLVQMSEQNRTARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHD 245
BLAST of DN618393 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 8.844e-65 Identity = 112/139 (80.58%), Postives = 122/139 (87.77%), Query Frame = 1 Query: 151 NASRRNLGYLSCGMGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 567 NASRR+L YLSC GNPIDDCWRCDPNWE NRQRLADCAIGFGKNA+GGR GRIYVVTDP + D VNP+PGTLRYAV Q+EPLWIIF RDM IRLK+ELI+ SFKTIDGRG+SVHI GPC+ I Y TNIIIHG+NIHD Sbjct: 46 NASRRSLAYLSCRTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHD 184
BLAST of DN618393 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 1.970e-64 Identity = 110/154 (71.43%), Postives = 129/154 (83.77%), Query Frame = 1 Query: 106 VPDPELVVHEVHKSINASRRNLGYLSCGMGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 567 V D L + E+ + RR LGY +CG GNPIDDCWRCDPNW KNR+RLADC IGFG+NA+GGRDGR YVVTDP D + VNP+PGTLR+AVIQD PLWI+F RDM I+LK+ELI+NSFKTIDGRGA+VHIA G CITIQ+VTN+I+HGL+IHD Sbjct: 51 VADEVLALTEMSVRNHTERRKLGYFTCGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHD 204
BLAST of DN618393 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 4.389e-64 Identity = 115/158 (72.78%), Postives = 128/158 (81.01%), Query Frame = 1 Query: 103 AVPDPELVVHEVHKSINAS--RRNLGYLS-CGMGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 567 AV DPE + V SI S RR LG+ S C GNPIDDCWRCD W + R+RLADCAIGFG+NAVGGRDGR Y+VTDP D+D V PKPGTLRYAVIQDEPLWI+F RDM I L +ELIMNSFKTIDGRG +VHIAGG C+T+QYVTNIIIHG+NIHD Sbjct: 36 AVKDPEEIAAMVDMSIRNSTYRRKLGFFSSCSTGNPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHD 193
BLAST of DN618393 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 3.716e-63 Identity = 113/157 (71.97%), Postives = 128/157 (81.53%), Query Frame = 1 Query: 103 AVPDPELVVHEVHKSINAS--RRNLGYLSCGMGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 567 AV +P+ V V SI S RR LGY SC GNPIDDCWRCD W+ R+RLADC+IGFG+NA+GGRDGR YVVTDPGD D VNP PGTLR+AVIQDEPLWIIF RDM I LK+ELIMNSFKTIDGRG +VHIA G C+TIQYVTNII+HG+++HD Sbjct: 35 AVENPDEVAAMVDMSIRNSTERRRLGYFSCATGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHD 191
BLAST of DN618393 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 1.844e-62 Identity = 112/157 (71.34%), Postives = 126/157 (80.25%), Query Frame = 1 Query: 103 AVPDPELVVHEVHKSINAS--RRNLGYLSCGMGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 567 AV +PE V V I S RR LG+ SC GNPIDDCWRCD NW R+RLA+CAIGFG+NA+GGRDGR YVVTDP D+D VNP+PGTLR+AVIQD PLWI+F RDM I L +ELIMNSFKTIDGRG +V IAGG CITIQYVTNIIIHG+N+HD Sbjct: 59 AVKNPEEVAAMVDMKIKNSTERRRLGFFSCATGNPIDDCWRCDRNWHLRRKRLANCAIGFGRNAIGGRDGRYYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQYVTNIIIHGINVHD 215 The following BLAST results are available for this feature:
BLAST of DN618393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618393 ID=DN618393; Name=DN618393; organism=Citrus sinensis; type=EST; length=569bpback to top |