DN618392

Overview
NameDN618392
Unique NameDN618392
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length506
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN618392 vs. ExPASy Swiss-Prot
Match: ACOX4_ARATH (Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana GN=ACX4 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.676e-47
Identity = 91/108 (84.26%), Postives = 100/108 (92.59%), Query Frame = -3 
Query:  181 QMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGIASFKPVALATRSRL 504
            QMLGN+QAM L+GWRLCKLYE G MTPG ASLGK+WI+++ARET +LGRELLGGNGIL+DFLVAKAFCD+EPIYTYEGTYDINTLVTGREVTGIASFKP   ATRSRL
Sbjct:  332 QMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWISSKARETASLGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTGIASFKP---ATRSRL 436
The following BLAST results are available for this feature:
BLAST of DN618392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ACOX4_ARATH1.676e-4784.26Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02I02_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618392 ID=DN618392; Name=DN618392; organism=Citrus sinensis; type=EST; length=506bp
TTTTTTTTTTTTTTTTTGATAAGGAGACGAGTGCCTTTTTCATTTTTTAA
TTTGTCATGTTCTATACACATCTTGTATTAACTTATTTGCTTTCATCTTC
CAAGATATTACAGGTTTTATTTTTCCAATCAAAGCACCCTCTATCCACCA
ACACGAGTGTAGGAAAAGAGTGTACCATCAAAGACGGCTGCGAGTTGCCA
AAGCCACAGGCTTGAAGCTTGCAATACCCGTGACTTCTCTACCAGTTACC
AAAGTGTTAATATCATAGGTTCCTTCATATGTGTAGATGGGTTCAATATC
GCAGAATGCCTTTGCAACTAGAAAATCAGATAAAATTCCATTGCCACCAA
GTAACTCACGTCCAAGAGCAACTGTTTCCCTAGCCCTTGCAGTGATCCAA
GACTTTCCCAAGCTGGCATGACCAGGAGTCATTGCACCTTTCTCATATAA
TTTGCAAAGGCGCCAACCAACCAGAATCATGGCTTGAATATTTCCCAGCA
TCTGAA
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