DN618389

Overview
NameDN618389
Unique NameDN618389
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618389 vs. ExPASy Swiss-Prot
Match: HS185_ARATH (18.5 kDa class IV heat shock protein OS=Arabidopsis thaliana GN=HSP18.5 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.059e-28
Identity = 75/146 (51.37%), Postives = 87/146 (59.59%), Query Frame = 2
Query:   47 VWGPFQ--NFLEEFPLSIDLWGPFSDFPSLSRGIFP-----TRQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTDDGKFMSRFKLPDNAITDQGKASMNYGLLTVTDSKEMSLQP---------QNVRVVEITGSD 436
            +W PF+  N   +FP           FPSLSR IFP     T  TQ+NW+ETP AHVFKAY PG+  D+VI FVDE+  LQI T D KFMSRFKLP+NA+TDQ  A M    L V   K+ S  P         +NVRVVEITG D
Sbjct:   18 IWEPFELMNTFLDFPSPALFLS--HHFPSLSREIFPQTSSSTVNTQLNWTETPTAHVFKAYLPGVDQDEVIAFVDEEGYLQICTGDNKFMSRFKLPNNALTDQVTAWMEDEFLVVFVEKDASSSPPQLPEIEENRNVRVVEITGDD 161          
BLAST of DN618389 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.677e-22
Identity = 62/142 (43.66%), Postives = 83/142 (58.45%), Query Frame = 2
Query:   83 PLSIDLWGPFSDFP----SLSRGIFPTRQ-----TQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQGKASMNYGLLTVTDSKEMSLQPQNVRVVEIT 427
            P S+D+W PF DFP    +LS   FP        T+I+W ETP AHVFKA  PGL  ++V V +++DR+LQIS +                   GKFM RF+LP+NA  DQ KA+M  G+LTVT  KE   +P+ V+ +EI+
Sbjct:    2 PFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIKKPE-VKSIEIS 142          
BLAST of DN618389 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.414e-22
Identity = 62/145 (42.76%), Postives = 87/145 (60.00%), Query Frame = 2
Query:   83 PLSIDLWGPFSDFP---SLSRGIFP--TRQ------TQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQGKASMNYGLLTVTDSKEMSLQPQNVRVVEITG 430
            P S+D+W PF DFP   +LS   FP  +R+      T+++W ETP AHVFKA  PGL  ++V V +++D++LQIS +                   GKFM RF+LP+NA  +Q KASM  G+LTVT  KE   +P +V+ +EI+G
Sbjct:   18 PFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKP-DVKAIEISG 161          
BLAST of DN618389 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.157e-21
Identity = 59/142 (41.55%), Postives = 82/142 (57.75%), Query Frame = 2
Query:   83 PLSIDLWGPFSDFP---SLSRGIFPTRQ-----TQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQGKASMNYGLLTVTDSKEMSLQPQNVRVVEITG 430
            P S+D+W PF DFP   S     FP        T+++W ETP AHVFKA  PG+  ++V V +++DR+LQIS +                   GKFM RF+LP+NA  DQ KA+M  G+LTVT  KE   +P+ V+ ++I+G
Sbjct:   18 PFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPE-VKTIDISG 158          
BLAST of DN618389 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.385e-20
Identity = 58/137 (42.34%), Postives = 80/137 (58.39%), Query Frame = 2
Query:   83 PLSIDLWGPFSDF---PSLSRGIFPTRQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQGKASMNYGLLTVTDSKEMSLQPQNVRVVEITG 430
            P S+D+W PF DF    SLS        T+++W ETP AHVF+A  PGL  ++V V +++DR+LQIS +                   G FM RF+LP+NA  +Q KASM  G+LTVT  KE   +P +V+ +EI+G
Sbjct:   18 PFSLDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKP-DVKAIEISG 153          
BLAST of DN618389 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.385e-20
Identity = 59/142 (41.55%), Postives = 80/142 (56.34%), Query Frame = 2
Query:   83 PLSIDLWGPFSDFP---SLSRGIFPTRQ-----TQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQGKASMNYGLLTVTDSKEMSLQPQNVRVVEITG 430
            P S+D+W P  DFP   S     FP        T+++W ETP AHVFKA  PGL  ++V V V++DR+LQIS +                   GKF+ RF+LP+NA  D+ KASM  G+LTVT  KE  ++   V+ +EI+G
Sbjct:   18 PFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKE-EIKKAEVKSIEISG 158          
BLAST of DN618389 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.068e-20
Identity = 62/137 (45.26%), Postives = 81/137 (59.12%), Query Frame = 2
Query:   83 PLSIDLWGPFSD--FPSLSRGIFPT-RQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQGKASMNYGLLTVTDSKEMSLQPQNVRVVEITG 430
            P SID++ PF +  FP  + G       T+I+W ETP AHVFKA  PGL  ++V V V+EDR+LQIS +                   GKFM RF+LP+NA  DQ KASM  G+LTVT  KE   +P +V+ +EI+G
Sbjct:   19 PFSIDVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKP-DVKSIEISG 154          
BLAST of DN618389 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.940e-20
Identity = 57/138 (41.30%), Postives = 80/138 (57.97%), Query Frame = 2
Query:   83 PLSIDLWGPFSDF----PSLSRGIFPTRQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQGKASMNYGLLTVTDSKEMSLQPQNVRVVEITG 430
            P S+D+W PF DF     S+S        T+++W ETP AHVFKA  PGL  ++V V +++DR+LQIS +                   GKF  RF+LP+NA  ++ KASM  G+LTVT  KE   +P +V+ +EI+G
Sbjct:   18 PFSLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKP-DVKAIEISG 154          
BLAST of DN618389 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.940e-20
Identity = 57/137 (41.61%), Postives = 79/137 (57.66%), Query Frame = 2
Query:   83 PLSIDLWGPFSDFP---SLSRGIFPTRQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQGKASMNYGLLTVTDSKEMSLQPQNVRVVEITG 430
            P S+D+W PF DFP   SLS        T+++W ETP AHVFKA  PGL  ++V + + + R+LQIS +                   GK + RF+LP+NA  DQ KASM  G+LTVT  KE   +P +V+ ++I+G
Sbjct:   18 PFSLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKP-DVKAIDISG 153          
BLAST of DN618389 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.063e-20
Identity = 61/137 (44.53%), Postives = 80/137 (58.39%), Query Frame = 2
Query:   83 PLSIDLWGPFSD--FPSLSRGIFPT-RQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQGKASMNYGLLTVTDSKEMSLQPQNVRVVEITG 430
            P SID++ PF +  FPS + G       T+I+W ETP  HVFK   PGL  ++V V V+EDR+LQIS +                   GKFM RF+LP+NA  DQ KASM  G+LTVT  KE   +P+ V+ +EI+G
Sbjct:   19 PFSIDVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPE-VKSIEISG 154          
The following BLAST results are available for this feature:
BLAST of DN618389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
HS185_ARATH4.059e-2851.3718.5 kDa class IV heat shock protein OS=Arabidopsi... [more]
HSP11_MEDSA5.677e-2243.6618.1 kDa class I heat shock protein (Fragment) OS=... [more]
HSP16_SOYBN7.414e-2242.7618.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA2.157e-2141.5518.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP13_SOYBN2.385e-2042.3417.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_PEA2.385e-2041.5518.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP11_SOLPE4.068e-2045.2617.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP14_SOYBN6.940e-2041.3017.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOYBN6.940e-2041.6117.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOLLC9.063e-2044.5317.8 kDa class I heat shock protein OS=Solanum lyc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02I01_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002I01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618389 ID=DN618389; Name=DN618389; organism=Citrus sinensis; type=EST; length=518bp
GGTAAGCGATCAAGGTATAATATCTAACACTCCTCTCTCTTCAGAAGTAT
GGGGTCCCTTCCAGAACTTTCTAGAAGAATTCCCCTTATCCATTGACCTT
TGGGGCCCATTCAGTGATTTTCCTTCACTTTCCCGGGGGATTTTTCCAAC
CCGTCAAACCCAGATCAACTGGAGTGAGACCCCGAGAGCCCACGTGTTCA
AAGCTTACTTTCCAGGGCTGACGGGAGACCAAGTGATAGTGTTCGTCGAT
GAAGACAGAATGCTCCAAATAAGCACCGATGATGGCAAGTTCATGAGCAG
GTTTAAGCTGCCTGATAATGCTATTACCGATCAGGGCAAGGCTTCCATGA
ATTATGGGTTGCTCACTGTTACAGACTCTAAGGAGATGTCACTGCAGCCA
CAAAATGTTAGGGTTGTTGAAATTACTGGGTCTGACTAAATTTCTGGGTT
TGTGATATTATTGTGCCTATATATATATATATAATGTGAGCTTGTGTTTG
CTTTGAAGTGTAGACTTG
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