DN618387

Overview
NameDN618387
Unique NameDN618387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618387 vs. ExPASy Swiss-Prot
Match: ACLY_CAEEL (Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.272e-16
Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = -3
Query:  246 TSDPDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMHLYVRRGGPNYQRGLAKMRALAEEIGLPIEVYGPEATMTGICKQAI 521
            T  PDG+   L+IGG IANFT+VA TF GI++            ++ ++VRRGGPNYQ GL +++  A ++ LPI V+GPE  MT I   A+
Sbjct:  342 TPRPDGK--VLIIGGSIANFTNVAKTFGGIVRAFETFVSKLKEHKVTIFVRRGGPNYQEGLRRIKDAATKLELPIHVFGPETHMTAIVGAAL 431          
BLAST of DN618387 vs. ExPASy Swiss-Prot
Match: ACLY_SHEEP (ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.935e-15
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = -3
Query:  246 PDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMHLYVRRGGPNYQRGLAKMRALAEEIGLPIEVYGPEATMTGICKQAI 512
            PDG+   L+IGG IANFT+VAATF GI++             + ++VRRGGPNYQ GL  M  + +  G+PI V+G E  MT I   A+
Sbjct:  333 PDGK--ILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419          
BLAST of DN618387 vs. ExPASy Swiss-Prot
Match: ACLY_HUMAN (ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 6.935e-15
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = -3
Query:  246 PDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMHLYVRRGGPNYQRGLAKMRALAEEIGLPIEVYGPEATMTGICKQAI 512
            PDG+   L+IGG IANFT+VAATF GI++             + ++VRRGGPNYQ GL  M  + +  G+PI V+G E  MT I   A+
Sbjct:  333 PDGK--ILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419          
BLAST of DN618387 vs. ExPASy Swiss-Prot
Match: ACLY_BOVIN (ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.935e-15
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = -3
Query:  246 PDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMHLYVRRGGPNYQRGLAKMRALAEEIGLPIEVYGPEATMTGICKQAI 512
            PDG+   L+IGG IANFT+VAATF GI++             + ++VRRGGPNYQ GL  M  + +  G+PI V+G E  MT I   A+
Sbjct:  333 PDGK--ILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419          
BLAST of DN618387 vs. ExPASy Swiss-Prot
Match: ACLY_RAT (ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.183e-14
Identity = 41/88 (46.59%), Postives = 53/88 (60.23%), Query Frame = -3
Query:  249 PDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMHLYVRRGGPNYQRGLAKMRALAEEIGLPIEVYGPEATMTGICKQA 512
            PDG+   L+IGG IANFT+VAATF GI++             + ++VRRGGPNYQ GL  M  + +  G+PI V+G E  MT I   A
Sbjct:  333 PDGK--ILIIGGSIANFTNVAATFKGIVRAIRDYQGSLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMA 418          
BLAST of DN618387 vs. ExPASy Swiss-Prot
Match: ACLY_MOUSE (ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.018e-14
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = -3
Query:  246 PDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMHLYVRRGGPNYQRGLAKMRALAEEIGLPIEVYGPEATMTGICKQAI 512
            P+G+   L+IGG IANFT+VAATF GI++             + ++VRRGGPNYQ GL  M  + +  G+PI V+G E  MT I   A+
Sbjct:  333 PEGK--ILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419          
BLAST of DN618387 vs. ExPASy Swiss-Prot
Match: ACL2_SCHPO (Probable ATP-citrate synthase subunit 2 OS=Schizosaccharomyces pombe GN=SPAC22A12.16 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.446e-12
Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = -3
Query:  261 DPDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMHLYVRRGGPNYQRGLAKMRALAEEIGLPIEVYGPEATMTGI 515
            +P    + L IGGGIANFT  A TF  I +            ++ ++VRR GPNYQ GL  +R   ++  LP++VYGPE  ++GI
Sbjct:  391 EPRADGKVLFIGGGIANFTSPAVTFRAIARALGDYKDKLHAHKVSIWVRRAGPNYQEGLRVIREAGKKFDLPLKVYGPECHISGI 475          
The following BLAST results are available for this feature:
BLAST of DN618387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ACLY_CAEEL6.272e-1645.65Probable ATP-citrate synthase OS=Caenorhabditis el... [more]
ACLY_SHEEP6.935e-1546.07ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV... [more]
ACLY_HUMAN6.935e-1546.07ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 ... [more]
ACLY_BOVIN6.935e-1546.07ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV... [more]
ACLY_RAT1.183e-1446.59ATP-citrate synthase OS=Rattus norvegicus GN=Acly ... [more]
ACLY_MOUSE2.018e-1444.94ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 ... [more]
ACL2_SCHPO1.446e-1241.18Probable ATP-citrate synthase subunit 2 OS=Schizos... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02H24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002H24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618387 ID=DN618387; Name=DN618387; organism=Citrus sinensis; type=EST; length=526bp
GGGGGGGGGGCCCCCTTTTTTTAGAAGGCTACTTAATCTTTTATTATGGT
GACACTACAGACAGAGATCAGTTTTTCATCCTCATTAACCATATTTTGAA
CTAACATTACATCCTGAGGTATCTGATACAGCGAAATTGGTACAAAGTAA
TGATGATGGATACTAGAAATTTGCAATGACAATGGCGTGAGTGTGAAGCA
TTGAAGAAAGGAGTTGATAGCTCATGCAGCAGCGCTAATGCACTCAATAG
CCTGTTTGCATATGCCAGTCATTGTTGCTTCGGGCCCATAAACCTCAATG
GGAAGGCCAATTTCCTCTGCCAGTGCTCGCATTTTTGCAAGGCCCCTCTG
GTAATTAGGACCTCCTCTCCTCACATATAGGTGCATTCTTGCTGCTTTCA
GCTTCGATTCCTTTTCCTTCAGGGCTTGGATTATGCCATTGAATGTAGCT
GCAACATCAGTGAAGTTAGCTATTCCTCCTCCAATCACAAGGGCTCTCTT
GCGACCATCAGGATCTGAAGTTGCAC
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