DN618385

Overview
NameDN618385
Unique NameDN618385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 256.914 bits (655), Expect = 3.082e-68
Identity = 127/139 (91.37%), Postives = 131/139 (94.24%), Query Frame = 1
Query:   49 MESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            MEST+KEMRDGASVLD D KSTV GGVEDVYGEDRATEDQLVTPWTISVASGY LLRDP HNKGLAFTEKERDAHYLRGLLPP  ISQQLQEKKLMN+IRQY++PLQKY AMMELEERNERLFYKLLIDNVEELLPVVY
Sbjct:    1 MESTLKEMRDGASVLDMDPKSTVGGGVEDVYGEDRATEDQLVTPWTISVASGYTLLRDPHHNKGLAFTEKERDAHYLRGLLPPTTISQQLQEKKLMNTIRQYQLPLQKYTAMMELEERNERLFYKLLIDNVEELLPVVY 139          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 2.985e-63
Identity = 116/139 (83.45%), Postives = 130/139 (93.53%), Query Frame = 1
Query:   49 MESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            MEST+K++RDGASVLD D K+TV GGVED+YGED ATEDQLVTPWT+SVASGY LLRDPRHNKGLAF +KERDAHYL GLLPP V +Q+LQE+KLMNSIRQY+VPLQKY+AMM+L+ERNERLFYKLLIDNVEELLPVVY
Sbjct:    1 MESTLKDIRDGASVLDLDPKATVGGGVEDLYGEDFATEDQLVTPWTVSVASGYSLLRDPRHNKGLAFNDKERDAHYLCGLLPPVVSTQELQERKLMNSIRQYQVPLQKYMAMMDLQERNERLFYKLLIDNVEELLPVVY 139          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 6.898e-52
Identity = 99/153 (64.71%), Postives = 122/153 (79.74%), Query Frame = 1
Query:   22 KAEKVKRVRMESTMKEMRDGASVLDFDSKS-----TVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            + E+   V ++  +K++    +V   DS+S      V GGVEDVYGED ATED  +TPW++SVASGY LLRDP HNKGLAFTEKERDAHYLRGLLPP V++  LQ KK+M++IRQYEVPLQ+Y AMM+L+ERNERLFYKLLI+N+EELLP+VY
Sbjct:   43 RPERSVGVSVDGAVKDVNAPVAVEVADSESKKPTAVVGGGVEDVYGEDSATEDHFITPWSVSVASGYSLLRDPHHNKGLAFTEKERDAHYLRGLLPPVVVNHDLQVKKMMHNIRQYEVPLQRYQAMMDLQERNERLFYKLLIENIEELLPIVY 195          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 2.898e-50
Identity = 92/120 (76.67%), Postives = 109/120 (90.83%), Query Frame = 1
Query:  106 KSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            +STV GGV+DVYGED ATEDQ +TPWT+SVASG+ LLR+P +NKGLAF+E+ERD HYLRGLLPP VIS  LQ KK+MNSIR+Y+VPLQ+Y+AMM+L+E NERLFYKLLIDNVEELLP+VY
Sbjct:    4 ESTVTGGVQDVYGEDSATEDQSITPWTLSVASGFSLLRNPHYNKGLAFSERERDTHYLRGLLPPVVISHDLQVKKMMNSIRKYDVPLQRYMAMMDLQEMNERLFYKLLIDNVEELLPIVY 123          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 1.879e-49
Identity = 89/119 (74.79%), Postives = 107/119 (89.92%), Query Frame = 1
Query:  109 STVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            + V GGVED+YGED ATED  +TPW++SVASGY LLRDP HNKGLAFTEKERDAH+LRGLLPP V++  LQ KK+M++IRQY+VPLQ+Y AMM+L++RNERLFYKLLI+NVEELLP+VY
Sbjct:   77 AAVGGGVEDMYGEDTATEDHYITPWSVSVASGYSLLRDPHHNKGLAFTEKERDAHFLRGLLPPVVVNHDLQVKKMMHNIRQYQVPLQRYQAMMDLQQRNERLFYKLLIENVEELLPIVY 195          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 5.466e-49
Identity = 88/117 (75.21%), Postives = 108/117 (92.31%), Query Frame = 1
Query:  115 VEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            + GGV DVYGE+ AT+DQLVTPW+ SVA G+ LLRDP+HNKGLAFTEKERDAH+LRGLLPP V+SQ+LQEKK + ++RQY+VPLQKY+AMM+L+ERNE+LFYKLL+D+VEELLP+VY
Sbjct:   17 ITGGVADVYGEEFATQDQLVTPWSFSVACGHSLLRDPQHNKGLAFTEKERDAHFLRGLLPPVVLSQELQEKKFLTTLRQYQVPLQKYMAMMDLQERNEKLFYKLLVDHVEELLPLVY 133          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 9.323e-49
Identity = 90/115 (78.26%), Postives = 105/115 (91.30%), Query Frame = 1
Query:  121 GGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            GGV D+YGED ATED L+TPWT SVASG  LLRDPR+NKGLAFTE ERDAHYLRGLLPP+V +Q+LQEK+LM+++RQYEVPL +Y+A+M+L+ERNERLFYKLLIDNV ELLPVVY
Sbjct:   23 GGVRDLYGEDSATEDHLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPSVFNQELQEKRLMHNLRQYEVPLHRYMALMDLQERNERLFYKLLIDNVAELLPVVY 137          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 9.648e-46
Identity = 94/145 (64.83%), Postives = 112/145 (77.24%), Query Frame = 1
Query:   31 KVKRVRMESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            +V+ V MES  +  +        +  +   GGVED+     ATE+  VTPW  SVASGY LLRDP HNKGLAF+EKERDAHYLRGLLPPAV+SQ LQ KK+M+++RQY VPLQ+Y+AMM+L+ERNERLFYKLLIDNVEELLPVVY
Sbjct:   55 RVEAVAMESAAETEKK-------EEVAAAGGGVEDM-----ATEEVPVTPWAFSVASGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVVY 187          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 7.911e-40
Identity = 77/104 (74.04%), Postives = 89/104 (85.58%), Query Frame = 1
Query:  154 ATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            A+E+  V PW  SVASGY LLRDP HNKGLAFTE+ERD HYLRGLLPPAV+SQ+LQ KK MN++RQY+ PLQ+Y+AMM L+E +ERLFYKLLIDNV ELLP VY
Sbjct:   81 ASEELPVMPWATSVASGYTLLRDPHHNKGLAFTEEERDGHYLRGLLPPAVLSQELQIKKFMNTLRQYQTPLQRYIAMMNLQETDERLFYKLLIDNVVELLPFVY 184          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.452e-17
Identity = 39/88 (44.32%), Postives = 61/88 (69.32%), Query Frame = 1
Query:  202 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            GY L RDP  NK LAFT +ER    + GLLPP +ISQ+LQ  +++ +  +      +Y+ +M+L++RNE+LFY +L+ +VE+ +P+VY
Sbjct:   15 GYLLTRDPHLNKDLAFTLEERQQLNIHGLLPPCIISQELQVLRIIKNFERLNSDFDRYLLLMDLQDRNEKLFYSVLMSDVEKFMPIVY 102          
The following BLAST results are available for this feature:
BLAST of DN618385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
MAOX_POPTR3.082e-6891.37NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOX_VITVI2.985e-6383.45NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_FLAPR6.898e-5264.71NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_SOLLC2.898e-5076.67NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOC_FLATR1.879e-4974.79NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_MESCR5.466e-4975.21NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOX_PHAVU9.323e-4978.26NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_ORYSJ9.648e-4664.83NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_MAIZE7.911e-4074.04NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_MOUSE1.452e-1744.32NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02H23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002H23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618385 ID=DN618385; Name=DN618385; organism=Citrus sinensis; type=EST; length=467bp
TGTTTGTTTTCGTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGAGAAT
GGAGAGCACCATGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCG
ACTCGAAATCCACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGAT
CGTGCCACCGAGGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAG
CGGGTACTGTTTGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCA
CTGAGAAAGAGAGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCT
GTTATAAGTCAACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACA
ATATGAAGTTCCGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGA
GAAATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTT
CTCCCAGTCGTTTACAC
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