DN618363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618363 vs. ExPASy Swiss-Prot
Match: H1_SOLPN (Histone H1 OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.735e-30 Identity = 62/80 (77.50%), Postives = 71/80 (88.75%), Query Frame = -2 Query: 347 EKKPKQSKTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 586 EKKPK +K +HPPYFQMI EAL+AL +K GSSPYA+AKYME+KHKDELPANFRKIL +QLK+ AAKG LIKI+ASYKLS Sbjct: 38 EKKPKSAKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLS 117
BLAST of DN618363 vs. ExPASy Swiss-Prot
Match: H1_MAIZE (Histone H1 OS=Zea mays PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.015e-18 Identity = 42/77 (54.55%), Postives = 61/77 (79.22%), Query Frame = -2 Query: 347 PKQSKTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 577 PK+ +P+H PY +M++EA+ +L++++GSS YAIAK++E+KHK +LP NFRK+L VQLK A G L K++ SYKLS Sbjct: 42 PKKRASPTHLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLS 118
BLAST of DN618363 vs. ExPASy Swiss-Prot
Match: H1_WHEAT (Histone H1 OS=Triticum aestivum PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 5.035e-18 Identity = 43/79 (54.43%), Postives = 59/79 (74.68%), Query Frame = -2 Query: 347 KKPKQSKTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 583 KKP+ TP+HP Y +M++EA+ AL+++SGSS AI K++E+KHK LPANFRKIL Q+K A G L K++ SYKL+ Sbjct: 47 KKPRV--TPAHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKLA 123
BLAST of DN618363 vs. ExPASy Swiss-Prot
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.465e-17 Identity = 43/82 (52.44%), Postives = 62/82 (75.61%), Query Frame = -2 Query: 350 KKP----KQSKTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 583 KKP K+S TP+HPPYF+MI +A++ L++++GSS +AI K++EEK K LP+NF+K+L QLK F A L+K++ SYKL Sbjct: 42 KKPAAPRKRSATPTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQK-SLPSNFKKLLLTQLKKFVASEKLVKVKNSYKL 122
BLAST of DN618363 vs. ExPASy Swiss-Prot
Match: H1_EUPES (Histone H1 OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.264e-17 Identity = 40/78 (51.28%), Postives = 59/78 (75.64%), Query Frame = -2 Query: 350 KKPKQSKTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 583 KKPK T SHP +F+MI++A+ L++++GSS YAI K++E+KHK +LP+NFRK+L LK A G L+K++ S+KL Sbjct: 41 KKPKSKGTSSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHK-QLPSNFRKLLLFHLKKLVASGKLVKVKNSFKL 117
BLAST of DN618363 vs. ExPASy Swiss-Prot
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.155e-16 Identity = 43/82 (52.44%), Postives = 61/82 (74.39%), Query Frame = -2 Query: 347 KPKQSKTP----SHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 580 KPK++ P SHP Y +MI +A+++L++K+GSS YAIAK++EEK K +LPANF+K+L LK A G LIK++ S+KLS Sbjct: 49 KPKKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQK-QLPANFKKLLLQNLKKNVASGKLIKVKGSFKLS 129
BLAST of DN618363 vs. ExPASy Swiss-Prot
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.211e-15 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = -2 Query: 350 PKQSKTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 577 PK+ SHP Y +MI +A++ L++++GSS YAI K++EEK K ELP FRK+L + LK A G L+K++AS+KL Sbjct: 54 PKKRTVSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRK-ELPPTFRKLLLLNLKRLVASGKLVKVKASFKL 128
BLAST of DN618363 vs. ExPASy Swiss-Prot
Match: H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.980e-14 Identity = 37/75 (49.33%), Postives = 54/75 (72.00%), Query Frame = -2 Query: 350 KQSKTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 574 K+ T SHP Y +MI +A++ L++++GSS YAI K++EEKHK LP FRK+L V LK A L+K++AS+K+ Sbjct: 55 KKKTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHK-SLPPTFRKLLLVNLKRLVASEKLVKVKASFKI 128
BLAST of DN618363 vs. ExPASy Swiss-Prot
Match: H12_VOLCA (Histone H1-II OS=Volvox carteri GN=H1-II PE=2 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 6.370e-13 Identity = 37/81 (45.68%), Postives = 57/81 (70.37%), Query Frame = -2 Query: 347 EKKPKQSKTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKH-KDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 586 +KKPK + P+HPPY QM+T+A+++L+++ GSS A+ K++E K+ KD F K L++ LK F G L+K++ SYKLS Sbjct: 16 QKKPKTA--PTHPPYIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKVKNSYKLS 94
BLAST of DN618363 vs. ExPASy Swiss-Prot
Match: H11_VOLCA (Histone H1-I OS=Volvox carteri GN=H1-I PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 1.569e-11 Identity = 35/81 (43.21%), Postives = 55/81 (67.90%), Query Frame = -2 Query: 347 EKKPKQSKTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKH-KDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 586 EKKPK + P+HPPY +M+ +A+ L++++GSS A+ K++E K+ KD NF K L+ +K F G L+K++ S+KLS Sbjct: 50 EKKPKAA--PTHPPYIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLVKVKGSFKLS 128 The following BLAST results are available for this feature:
BLAST of DN618363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN618363 ID=DN618363; Name=DN618363; organism=Citrus sinensis; type=EST; length=587bpback to top |