DN618360

Overview
NameDN618360
Unique NameDN618360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length603
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN618360 vs. ExPASy Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.462e-31
Identity = 64/121 (52.89%), Postives = 85/121 (70.25%), Query Frame = 1 
Query:  241 EKWGTHVMGTPAAPTCHPDNKKXXXXXXXXXXDNRAQYNNHHHPYLQYSPVERPS-GSPMESILNVFNSWSNKAETLANNIWHNLKTNSSVSEAAWGKMNLTAKAIKGGGFETIXQQTFAT 600
            +KWGTHVMG PAAP  HPDN++          DN+      + PY+ YSPVE P+  +P+E ++ +F++WS KAET+A N+WHNLKT  S+SE AWGK+NLTAKAI  GGFE++ +Q F T
Sbjct:   37 KKWGTHVMGAPAAPVAHPDNQQAAAWVAG---DNQ---QTQYQPYVIYSPVEHPTTNNPLEPVIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGT 151
The following BLAST results are available for this feature:
BLAST of DN618360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GEML5_ARATH1.462e-3152.89GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02H09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618360 ID=DN618360; Name=DN618360; organism=Citrus sinensis; type=EST; length=603bp
CAAAACCACCGCACGCCTCACAATATTCCAATCAATCAGGCATAGAATCC
CTCAAAGAAGCTCTTTCTTTCTTGCAAATTACTTGGCTTCAAATTTAAAA
CCAAAATGAACGGCACCACCACCCAGGAATCAAACCCTTCTCATCACCAA
ACATCACTAAGCAGTACTAATCAAGAAATGCAATCTCATCAAGCTGCCGG
TCCATCATCGTCATCTGGACCAGCAAGCACTGCAAGTGCTGAGAAATGGG
GAACTCATGTAATGGGGACGCCTGCTGCTCCCACGTGTCATCCGGACAAC
AAGAAAGCAGCCTTGTGGGGAGCTGGAGCTGCTGGTGATAATCGAGCTCA
ATACAACAATCATCACCACCCGTACCTCCAGTACAGTCCCGTTGAAAGGC
CAAGCGGCAGCCCCATGGAATCTATTCTCAATGTCTTCAACTCTTGGAGC
AACAAGGCTGAGACCTTGGCCAATAACATTTGGCACAACCTTAAAACGAA
CTCATCTGTGTCAGAGGCAGCATGGGGGAAGATGAATCTGACTGCCAAAG
CAATAAAAGGAGGAGGGTTTGAGACTATATANCAGCAAACTTTTGCAACC
CAC
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