DN618359

Overview
NameDN618359
Unique NameDN618359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618359 vs. ExPASy Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.769e-58
Identity = 99/142 (69.72%), Postives = 122/142 (85.92%), Query Frame = -1
Query:  233 SEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESISNF 658
            SE AWGK+NLTAKAI  GGFE++++Q F T  NETLKKTFACYLST+TGPVAGT+YLSN  VAFCSDRPL FTAPSGQ++WSYY+V++PLA +  +NPV+++E   EKYIQ+ T+DGH+FWFMGFVNY+KAT HL  S+S+F
Sbjct:  122 SETAWGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVSDF 263          
BLAST of DN618359 vs. ExPASy Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.701e-36
Identity = 69/139 (49.64%), Postives = 95/139 (68.35%), Query Frame = -1
Query:  242 SEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESI 658
            ++AA G++  + K    GG+E I++QTF T   E L  +FACYLSTS GPV G LY+S+  +A+CSD PLS+     Q  WSYYKV++PL  + A+NP     N +EKYIQ++++D HEFWFMGF+NYD A   L +S+
Sbjct:  154 ADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSY-KNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSL 291          
BLAST of DN618359 vs. ExPASy Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.651e-34
Identity = 70/142 (49.30%), Postives = 98/142 (69.01%), Query Frame = -1
Query:  236 SEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKT-WSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESISN 658
            ++AA  ++    K +  GG+E ++KQTF    +E L KT+ACYLSTS GPV G +YLS   +AF SD PLS+    G++T WSYYKV+LP   + A+NP   R N+S+KYIQ+++ID HEFWFMGFV Y+ A + L E++ +
Sbjct:  117 ADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSYK--EGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMGFVTYESAVKSLQEAVQS 256          
BLAST of DN618359 vs. ExPASy Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 4.652e-29
Identity = 60/141 (42.55%), Postives = 90/141 (63.83%), Query Frame = -1
Query:  236 SEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESISN 658
            +E    K++L AK ++ GG E IYK+ F     E L K + CYLST+ GP+AG L++S+  +AFCS+R +   +P G  +  +YKV +PL  I  +N     +  S+KY++IVTID  +FWFMGFV+Y KA   L ++++N
Sbjct:   75 TETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALNN 215          
BLAST of DN618359 vs. ExPASy Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.075e-29
Identity = 57/140 (40.71%), Postives = 89/140 (63.57%), Query Frame = -1
Query:  239 SEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESIS 658
            +E    K++L A+ ++ GG E IYK+ F     E L K + CYLST+ GP+AG L++S+  +AFCS+R +   +P G+    +YKV +PL  I  +N        S+KY+++VT+DG +FWFMGF++Y KA   L +++S
Sbjct:   75 TETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214          
BLAST of DN618359 vs. ExPASy Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.309e-28
Identity = 57/140 (40.71%), Postives = 90/140 (64.29%), Query Frame = -1
Query:  239 SEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESIS 658
            +E    K++L AK ++ GG E IYK+ F     E L K + CYLST+ G +AG L++S+  +AFCS+R +  T+P G  T  +YKV +PL  I  +N     +  S++Y+++VT+D ++FWFMGFV+Y KA   L ++++
Sbjct:   67 TETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALN 206          
BLAST of DN618359 vs. ExPASy Swiss-Prot
Match: GEML3_ARATH (Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100 PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.717e-28
Identity = 59/137 (43.07%), Postives = 86/137 (62.77%), Query Frame = -1
Query:  242 AAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESI 652
            AA G++  + K +  GG+E I++QTF T   E L+ +FACYLSTS GPV G LY+S   +A+CSD  L               V++PL  + ++NP I   N +EKYIQ++++D HEFWFMGF+NY+ A   L +++
Sbjct:  109 AAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSL---------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMGFLNYEGAVTSLQDTL 230          
BLAST of DN618359 vs. ExPASy Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.146e-27
Identity = 56/140 (40.00%), Postives = 90/140 (64.29%), Query Frame = -1
Query:  239 SEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESIS 658
            +E    K++L A+ ++ GG E I+K+ F   + E L K + CYLST+ GP+AG L++S+  +AFCS+R +   +P G     +YKV +PL  I  +N     +  S+KY+++VT+DG +FWFMGF++Y KA   L +++S
Sbjct:   74 TETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213          
BLAST of DN618359 vs. ExPASy Swiss-Prot
Match: GEML2_ARATH (GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22
Identity = 54/142 (38.03%), Postives = 85/142 (59.86%), Query Frame = -1
Query:  236 SEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSF-TAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESISN 658
            S+AA  +++   K I  GG E ++++ F     E L  +F CY+ST++GPV G +Y+SN  +AFCSD  +   ++  G    +YYKV++    I +I+        SE+Y+ +VT DG EFWFMGFV+Y  A   L++++ N
Sbjct:   85 SDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKALLN 226          
The following BLAST results are available for this feature:
BLAST of DN618359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
GEML5_ARATH4.769e-5869.72GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g... [more]
GEM_ARATH6.701e-3649.64GLABRA2 expression modulator OS=Arabidopsis thalia... [more]
GEML1_ARATH1.651e-3449.30GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1... [more]
GEML6_ARATH4.652e-2942.55GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g... [more]
GEML8_ARATH6.075e-2940.71Putative GEM-like protein 8 OS=Arabidopsis thalian... [more]
GEML7_ARATH2.309e-2840.71GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g... [more]
GEML3_ARATH6.717e-2843.07Putative GEM-like protein 3 OS=Arabidopsis thalian... [more]
GEML4_ARATH1.146e-2740.00GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g... [more]
GEML2_ARATH3.229e-2238.03GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02H09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618359 ID=DN618359; Name=DN618359; organism=Citrus sinensis; type=EST; length=658bp
CTTTTTTTTCGTTACCTGGGCTTTATTAGGTAAACTCAAACGAGGTATTT
ATGAAACCACAAGGATAAGAATTGGTTACAGTACAACAAATCCATGCTTA
CATAATCAAGGCAGAAAAAGAGAAACCGAAACAGAAACTAATCTCTGATG
GAATTCACAAAAAGAGCAACTAACAAAAACGACCGCTCTCAGATCAAGCA
CCATTTGGTTGAACCGCTATGCCAGTAGCTACAAAATTTGAGATACTTTC
GGAAAGGTGCCGAGTTGCTTTGTCATAATTAACAAACCCCATGAACCAAA
ACTCGTGCCCATCGATTGTAACAATCTGGATGTATTTCTCGGAAGAATTT
TCCCTCATGATCACTGGATTGATGGCACCAATCATGGCCAAAGGTAACAT
AACCTTGTAGTAGCTCCAAGTCTTCTGACCAGAGGGTGCAGTGAAAGACA
GGGGGCGATCGCTGCAAAAAGCCACATGAACATTGGAGAGATACAGAGTT
CCAGCCACTGGTCCTGTTGATGTTGAAAGGTAACAGGCAAATGTCTTCTT
CAAAGTCTCATTCTGGTGGGTTGCAAAAGTTTGCTTGTATATAGTCTCAA
ACCCTCCTCCTTTTATTGCTTTGGCAGTCAGATTCATCTTCCCCCATGCT
GCCTCTGA
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