DN618356

Overview
NameDN618356
Unique NameDN618356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618356 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.312e-55
Identity = 120/185 (64.86%), Postives = 129/185 (69.73%), Query Frame = 1
Query:   43 MESRVLSRAXXXXXX--ISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGE--AAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC 585
            MESRVLSRA        ++ L R PL N    S  S+K  G+V +GGN++WGRQLRP L        A L       LRP  ATA     G+DSAGE   APV FF RYPAL TGFFFF WYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPID  LLKLLIPVAVC
Sbjct:    1 MESRVLSRATTLSSLPTLNKLHRLPLAN---ASLPSVKSFGSVSDGGNLVWGRQLRPELCSPVLKKGASL-------LRPCPATAG----GNDSAGEEKVAPVGFFSRYPALTTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLIPVAVC 171          
BLAST of DN618356 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.691e-53
Identity = 110/183 (60.11%), Postives = 123/183 (67.21%), Query Frame = 1
Query:   43 MESRVLSRAXXXXXXISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAG--KKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC 585
            MESRVLS        I  L R               P      GGN++WGRQLRP+LL    ++P  L     K+++L+P  ATAS      DSAG+AAPV FF +YP LVTGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVS IHL VGVVYCL  WAVGLPKRAP+DS LLKLLIPVA C
Sbjct:    1 MESRVLSSGATTISGIPRLTRPAGRTTTTTVVAVASPAKLNTNGGNLVWGRQLRPSLLNLDHSSPVSLVTKPVKRDVLKPCTATAS------DSAGDAAPVGFFAKYPFLVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMDSNLLKLLIPVAFC 177          
BLAST of DN618356 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.832e-52
Identity = 113/187 (60.43%), Postives = 131/187 (70.05%), Query Frame = 1
Query:   43 MESRVLSRAXXXXXXISSLRRSPLENHQNVSFIS------LKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC 585
            MESRVL RA      +  LRR     ++  S  S       KPIG++GEGGN+I GRQLRP LLL+S          K+EIL+P+ A +   AEG DSAGE   V F  +YP LVTG    MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW+VGLPKRAP++S +LK+LIPVAVC
Sbjct:    1 MESRVLLRATETVTGVPQLRRPIRAINRQFSTASSSFTAFAKPIGSIGEGGNLISGRQLRPLLLLDS-------LPEKREILKPVRAAS---AEGGDSAGETK-VGFLGKYPWLVTGILLLMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVC 176          
BLAST of DN618356 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 5.330e-52
Identity = 108/183 (59.02%), Postives = 124/183 (67.76%), Query Frame = 1
Query:   43 MESRVLSRAXXXXXXISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAG--KKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC 585
            MESRVLS        +  L + P       +     P      GGNV+WGRQLRP+LL    ++P  L     K+++L+P  ATAS      DSAG+AAPV F  +YP LVTGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL SW VGLPKRAP+DS +LKLLIPV  C
Sbjct:    1 MESRVLSSGATAISGVPRLTK-PAGRITTTTVAVAFPARLNATGGNVVWGRQLRPSLLNLDHSSPVSLVTKPVKRDVLKPCSATAS------DSAGDAAPVGFLAKYPFLVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLGSWTVGLPKRAPVDSNILKLLIPVGFC 176          
BLAST of DN618356 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.476e-49
Identity = 107/185 (57.84%), Postives = 126/185 (68.11%), Query Frame = 1
Query:   43 MESRVLSRAXXXXXXISSLRRSPLENHQNVSF---ISLK-PIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC 585
            MESRVLSR       I++L +    + +  SF     +K P+G V +GG++ WGRQLRP LLLE      G    ++E       TA  P   +  +   A   F ++YPALVTG FFFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL SW+VGLPKRAP+DSKLLKLLIPVAVC
Sbjct:    1 MESRVLSRTTA----IAALPKLFRPSREAASFGFATGVKTPVGLVKDGGSLTWGRQLRPVLLLEP--VQTGPVCSRRE------KTAVQPCRAASGSSGEAKTGFLEKYPALVTGSFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWSVGLPKRAPMDSKLLKLLIPVAVC 173          
BLAST of DN618356 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.223e-49
Identity = 100/149 (67.11%), Postives = 115/149 (77.18%), Query Frame = 1
Query:  139 ISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC 585
            ++ KP+G +  G N+IWGRQLRPA+LLE+S         K+E ++P  A ASS A  SDS+G+A  V FF++   L TGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPIDS  LKLL PVA C
Sbjct:   45 VTAKPVGPLIAGPNLIWGRQLRPAILLETSP--------KRESIKPCSAAASSSAGSSDSSGDAK-VGFFNK-ATLTTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWGVGLPKRAPIDSTQLKLLTPVAFC 183          
BLAST of DN618356 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.204e-49
Identity = 94/148 (63.51%), Postives = 116/148 (78.38%), Query Frame = 1
Query:  142 SLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC 585
            ++K   AV +   ++WGRQLRPALLL ++  P+ L   ++  L+P       PA  ++SAGEA  V F ++YPALVTGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVS+IHL+VGVVYCL+SW+VGLPKRAPI+  LLKLL PVA+C
Sbjct:   40 TVKCAAAVPDAAPIVWGRQLRPALLLPAALLPS-LQPARRHTLQP-------PAAAAESAGEAKSVGFLEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSLIHLVVGVVYCLISWSVGLPKRAPINGTLLKLLFPVALC 179          
BLAST of DN618356 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.129e-12
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 1
Query:  364 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAV 582
            L  G +F  W+ LNV+FNI NK++ N +PYP+  S + L  G +  L+SWAVG+ +    D    K L PVAV
Sbjct:   95 LKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLMMLISWAVGIVETPKTDFDFWKTLFPVAV 167          
BLAST of DN618356 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.495e-11
Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 1
Query:  364 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAV 582
            L  G +F  W+ LNV+FNI NK++ N FPYP+  S + L  G +  LVSWA  +      D +  K L PVAV
Sbjct:   95 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAV 167          
The following BLAST results are available for this feature:
BLAST of DN618356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
TPT_PEA2.312e-5564.86Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR3.691e-5360.11Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB1.832e-5260.43Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR5.330e-5259.02Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL2.476e-4957.84Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU4.223e-4967.11Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE7.204e-4963.51Triose phosphate/phosphate translocator, chloropla... [more]
GPT1_ARATH4.129e-1243.84Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
GPT2_ARATH3.495e-1143.84Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02H07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618356 ID=DN618356; Name=DN618356; organism=Citrus sinensis; type=EST; length=586bp
CACATTTGTTTCTCTCTCAAAAGTAGCCACAGCGGTGACACGATGGAGTC
GCGAGTGCTGTCACGCGCCACCACCACCACCACCACCATTTCAAGCCTCC
GAAGATCGCCGCTTGAGAACCACCAAAACGTCAGCTTCATCTCGTTGAAG
CCGATTGGAGCCGTTGGTGAAGGCGGGAATGTCATTTGGGGAAGACAGCT
ACGTCCTGCTCTGCTCCTCGAGAGCTCCAATGCTCCGGCTGGTCTTTTCG
CCGGAAAGAAGGAGATTCTCCGTCCAATCCTCGCCACCGCTTCTTCTCCT
GCCGAAGGAAGCGATTCCGCCGGAGAAGCTGCTCCGGTCAGATTCTTTGA
CAGGTATCCGGCCCTCGTGACCGGGTTCTTCTTCTTCATGTGGTACTTCC
TGAACGTGATATTCAACATTCTTAACAAGAGGATTTACAATTACTTCCCA
TATCCTTATTTTGTGTCCGTTATTCATTTGTTGGTTGGGGTGGTTTACTG
TTTGGTGAGCTGGGCTGTGGGCCTTCCCAAGCGAGCTCCTATTGATTCAA
AACTCCTGAAGCTCTTAATCCCTGTTGCTGTGTGTC
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