DN618338

Overview
NameDN618338
Unique NameDN618338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length478
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618338 vs. ExPASy Swiss-Prot
Match: CTBL1_RAT (Beta-catenin-like protein 1 OS=Rattus norvegicus GN=Ctnnbl1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.050e-29
Identity = 65/152 (42.76%), Postives = 104/152 (68.42%), Query Frame = 2
Query:   29 GKRRRTDAVLSNGNDKIDPSLLEAL----EKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIE 472
            G+ R  +A  +   D     LL+ +    E+ +   E LD  +VKK++L+FE+R  +N E R+K+PD PEKF ++E+DL++ ++++ V+A  P+LY  +V L+ + S+LGLL HDNTD++I VV LLQ+LTD D L +++E A VL+DAL++
Sbjct:   39 GRYREDEATAAEDADDDKKRLLQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHLLVELSAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVD 190          
BLAST of DN618338 vs. ExPASy Swiss-Prot
Match: CTBL1_HUMAN (Beta-catenin-like protein 1 OS=Homo sapiens GN=CTNNBL1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.791e-29
Identity = 65/152 (42.76%), Postives = 103/152 (67.76%), Query Frame = 2
Query:   29 GKRRRTDAVLSNGNDKIDPSLLEAL----EKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIE 472
            G+ R  +  +    D     LL+ +    E+ +   E LD  +VKK++L+FE+R  +N E R+K+PD PEKF ++E+DL++ ++++ V+A  P+LY  +V LN + S+LGLL HDNTD++I VV LLQ+LTD D L +++E A VL+DAL++
Sbjct:   39 GRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVD 190          
BLAST of DN618338 vs. ExPASy Swiss-Prot
Match: CTBL1_BOVIN (Beta-catenin-like protein 1 OS=Bos taurus GN=CTNNBL1 PE=2 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 3.990e-29
Identity = 65/152 (42.76%), Postives = 102/152 (67.11%), Query Frame = 2
Query:   29 GKRRRTDAVLSNGNDKIDPSLLEAL----EKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIE 472
            G+ R  +  +    D     LL+ +    E+ +   E LD  +VKK++L+FE+R  +N E R+K+PD PEKF ++E+DL++ ++++ V+A  P+LY  +V LN + S+LGLL HDNTD++I VV LLQ+LTD D L +++E A VL DAL++
Sbjct:   39 GRYREEEMTVVEEADDDKKRLLQIIDREGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLTDALVD 190          
BLAST of DN618338 vs. ExPASy Swiss-Prot
Match: CTBL1_MOUSE (Beta-catenin-like protein 1 OS=Mus musculus GN=Ctnnbl1 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 5.211e-29
Identity = 64/152 (42.11%), Postives = 103/152 (67.76%), Query Frame = 2
Query:   29 GKRRRTDAVLSNGNDKIDPSLLEAL----EKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIE 472
            G+ R  +A  +         LL+ +    E+ +   E LD  +VKK++L+FE+R  +N E R+K+PD PEKF ++E+DL++ ++++ V+A  P+LY  +V L+ + S+LGLL HDNTD++I VV LLQ+LTD D L +++E A VL+DAL++
Sbjct:   39 GRYREEEATAAEDTADDKKRLLQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHLLVELSAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVD 190          
BLAST of DN618338 vs. ExPASy Swiss-Prot
Match: YLO6_SCHPO (Uncharacterized protein C1952.06c OS=Schizosaccharomyces pombe GN=SPAC1952.06c PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.923e-15
Identity = 46/139 (33.09%), Postives = 78/139 (56.12%), Query Frame = 2
Query:   20 ESGGKRRRTDAVLSNGNDKIDPSLLEALEKSQSSVEALDLRT--VKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLED 430
            E GG+         +G  K + ++L+ L++ ++  E   L    +K++V+  E+ +  N E R+KY   P++F ++E DL  E+    VL+  P L P  + L+ + + L L++H+N DI I V+ LL +LTDEDV  D
Sbjct:   48 EEGGR------FFGSGLKKSEKTVLDFLDEQEAQEEPASLTPTELKRMVVRLEKTINNNQELRIKYSTSPQRFIESEADLDLEIRSFNVLSEYPILIPIFLKLDCVSTFLELMNHENADITITVLELLIELTDEDVDPD 180          
The following BLAST results are available for this feature:
BLAST of DN618338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CTBL1_RAT1.050e-2942.76Beta-catenin-like protein 1 OS=Rattus norvegicus G... [more]
CTBL1_HUMAN1.791e-2942.76Beta-catenin-like protein 1 OS=Homo sapiens GN=CTN... [more]
CTBL1_BOVIN3.990e-2942.76Beta-catenin-like protein 1 OS=Bos taurus GN=CTNNB... [more]
CTBL1_MOUSE5.211e-2942.11Beta-catenin-like protein 1 OS=Mus musculus GN=Ctn... [more]
YLO6_SCHPO1.923e-1533.09Uncharacterized protein C1952.06c OS=Schizosacchar... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02G21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618338 ID=DN618338; Name=DN618338; organism=Citrus sinensis; type=EST; length=478bp
GTGGCAGGGTTTAGAAATGGAAAGCGGCGGCAAACGGAGACGAACCGACG
CCGTTCTATCGAACGGCAACGACAAGATCGACCCTTCTCTTCTAGAAGCC
CTCGAGAAATCGCAATCAAGCGTGGAAGCACTCGACCTACGCACCGTGAA
GAAGCTGGTGCTATCCTTCGAGCGACGTCTCAAAGAAAACATAGAGGCGC
GTCTCAAATACCCCGACCAGCCCGAGAAATTCGCCGACACCGAAGTCGAC
CTACACGAGGAACTCGAGAAGCTCAAAGTCCTCGCTGGTGGGCCCGAGCT
ATACCCCGACGTCGTGAATCTGAACGTCATCCCTTCCATCCTCGGCCTCC
TCTCGCACGACAACACCGACATTGCAATCGATGTCGTCCACTTGTTGCAA
GACCTGACCGACGAGGACGTGCTGGAGGATAACGACGAACCCGCCCGCGT
GCTGGTCGACGCCTTGATCGAGAACAAC
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