DN618336

Overview
NameDN618336
Unique NameDN618336
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618336 vs. ExPASy Swiss-Prot
Match: DRG1_MOUSE (Developmentally-regulated GTP-binding protein 1 OS=Mus musculus GN=Drg1 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.935e-51
Identity = 87/130 (66.92%), Postives = 108/130 (83.08%), Query Frame = -3
Query:  315 RIYMPCIYVINKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLEKIWEYLNLTRIYTKPKGMNPDYEDPVILSSKKRTVEDFCERIHKDMVKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIIKK 704
            R+Y+PCIYV+NKIDQI++EEL+I+ K+PH  P+SAH  WN D LLEKIW+YL L RIYTKPKG  PDY  PV+L   + TVEDFC +IHK+++K+FKYALVWG S KH PQ+VGK+H LEDEDV+QI+KK
Sbjct:  238 RVYIPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKGQLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDEDVIQIVKK 367          
BLAST of DN618336 vs. ExPASy Swiss-Prot
Match: DRG1_HUMAN (Developmentally-regulated GTP-binding protein 1 OS=Homo sapiens GN=DRG1 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.935e-51
Identity = 87/130 (66.92%), Postives = 108/130 (83.08%), Query Frame = -3
Query:  315 RIYMPCIYVINKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLEKIWEYLNLTRIYTKPKGMNPDYEDPVILSSKKRTVEDFCERIHKDMVKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIIKK 704
            R+Y+PCIYV+NKIDQI++EEL+I+ K+PH  P+SAH  WN D LLEKIW+YL L RIYTKPKG  PDY  PV+L   + TVEDFC +IHK+++K+FKYALVWG S KH PQ+VGK+H LEDEDV+QI+KK
Sbjct:  238 RVYIPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKGQLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDEDVIQIVKK 367          
BLAST of DN618336 vs. ExPASy Swiss-Prot
Match: DRG1_BOVIN (Developmentally-regulated GTP-binding protein 1 OS=Bos taurus GN=DRG1 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.935e-51
Identity = 87/130 (66.92%), Postives = 108/130 (83.08%), Query Frame = -3
Query:  315 RIYMPCIYVINKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLEKIWEYLNLTRIYTKPKGMNPDYEDPVILSSKKRTVEDFCERIHKDMVKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIIKK 704
            R+Y+PCIYV+NKIDQI++EEL+I+ K+PH  P+SAH  WN D LLEKIW+YL L RIYTKPKG  PDY  PV+L   + TVEDFC +IHK+++K+FKYALVWG S KH PQ+VGK+H LEDEDV+QI+KK
Sbjct:  238 RVYIPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKGQLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDEDVIQIVKK 367          
BLAST of DN618336 vs. ExPASy Swiss-Prot
Match: DRG1_DICDI (Developmentally-regulated GTP-binding protein 1 homolog OS=Dictyostelium discoideum GN=drg1 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.446e-51
Identity = 85/131 (64.89%), Postives = 111/131 (84.73%), Query Frame = -3
Query:  315 RIYMPCIYVINKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLEKIWEYLNLTRIYTKPKGMNPDYEDPVIL-SSKKRTVEDFCERIHKDMVKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIIKK 704
            RIY+PCIYV+NKID I++EEL++LDK+PHY P+S+HLEWNLD LL+KIWEYL L R+YTKPKG+ PDY +PV++   ++ ++E FC  IH  +++QF+YALVWGSSAKH PQR GK+H L DED+VQI+KK
Sbjct:  240 RIYVPCIYVLNKIDAISIEELDLLDKIPHYVPISSHLEWNLDALLDKIWEYLKLIRVYTKPKGLIPDYNEPVVIRGGEEASIETFCNHIHNSIIRQFRYALVWGSSAKHNPQRCGKDHVLADEDIVQIVKK 370          
BLAST of DN618336 vs. ExPASy Swiss-Prot
Match: DRG1_XENLA (Developmentally-regulated GTP-binding protein 1 OS=Xenopus laevis GN=drg1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.875e-50
Identity = 86/130 (66.15%), Postives = 106/130 (81.54%), Query Frame = -3
Query:  315 RIYMPCIYVINKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLEKIWEYLNLTRIYTKPKGMNPDYEDPVILSSKKRTVEDFCERIHKDMVKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIIKK 704
            R+Y+PCIYV+NKIDQI++EEL+I+ K+PH  P+SAH  WN D LLEKIW+YL L RIYTKPKG  PDY  PV+L       EDFC +IHK+++K+FKYALVWGSS KH PQ+VGK+H LEDEDV+QI+KK
Sbjct:  238 RVYIPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLQLVRIYTKPKGQLPDYTSPVVLPCSHTAAEDFCTKIHKNLIKEFKYALVWGSSVKHNPQKVGKDHVLEDEDVIQIVKK 367          
BLAST of DN618336 vs. ExPASy Swiss-Prot
Match: 128UP_DROME (GTP-binding protein 128up OS=Drosophila melanogaster GN=128up PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.619e-49
Identity = 83/131 (63.36%), Postives = 108/131 (82.44%), Query Frame = -3
Query:  312 RIYMPCIYVINKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLEKIWEYLNLTRIYTKPKGMNPDYEDPVILSSKKRTVEDFCERIHKDMVKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIIKKV 704
            RIY+PCIY++NKIDQI++EEL+++ K+PH  P+SAH  WN D LLE +WEYL L RIYTKPKG  PDY  PV+L +++ ++EDFC ++H+ + K+FKYALVWGSS KH+PQ+VG EH L DEDVVQI+KKV
Sbjct:  238 RIYIPCIYLLNKIDQISIEELDVIYKIPHCVPISAHHHWNFDDLLELMWEYLRLQRIYTKPKGQLPDYNSPVVLHNERTSIEDFCNKLHRSIAKEFKYALVWGSSVKHQPQKVGIEHVLNDEDVVQIVKKV 368          
BLAST of DN618336 vs. ExPASy Swiss-Prot
Match: RBG1_YEAST (GTP-binding protein RBG1 OS=Saccharomyces cerevisiae GN=RBG1 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.298e-40
Identity = 76/130 (58.46%), Postives = 101/130 (77.69%), Query Frame = -3
Query:  315 RIYMPCIYVINKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLEKIWEYLNLTRIYTKPKGMNPDYEDPVILSSKKRTVEDFCERIHKDMVKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIIKK 704
            R YMP IYV+NKID +++EELE+L ++P+  P+S+  +WNLD LL+ +W+ LNL RIYTKPKG  PD+ DPV+L S + +V+DFC +IHK +V  F+ ALV+GSS KH+PQ VG  H LEDEDVV I+KK
Sbjct:  240 RRYMPAIYVLNKIDSLSIEELELLYRIPNAVPISSGQDWNLDELLQVMWDRLNLVRIYTKPKGQIPDFTDPVVLRSDRCSVKDFCNQIHKSLVDDFRNALVYGSSVKHQPQYVGLSHILEDEDVVTILKK 369          
BLAST of DN618336 vs. ExPASy Swiss-Prot
Match: YFY7_SCHPO (Uncharacterized GTP-binding protein C9.07c OS=Schizosaccharomyces pombe GN=SPAC9.07c PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.791e-38
Identity = 67/130 (51.54%), Postives = 94/130 (72.31%), Query Frame = -3
Query:  315 RIYMPCIYVINKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLEKIWEYLNLTRIYTKPKGMNPDYEDPVILSSKKRTVEDFCERIHKDMVKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIIKK 704
            R+Y+P +YV+NKID I++EEL+++D++P+  P+  +  WN+D L E +W+YLNL R+YT+P+G+ PDY +PVIL +   TVEDFC  IH  +  QFK+A VWG S  +   RVG  H L DEDVV I+KK
Sbjct:  237 RVYIPALYVLNKIDSISIEELDLIDRIPNAVPICGNRGWNIDELKETMWDYLNLVRVYTRPRGLEPDYSEPVILRTGHSTVEDFCNNIHSSIKSQFKHAYVWGKSVPYPGMRVGLSHVLLDEDVVTIVKK 366          
BLAST of DN618336 vs. ExPASy Swiss-Prot
Match: DRG2_MOUSE (Developmentally-regulated GTP-binding protein 2 OS=Mus musculus GN=Drg2 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.036e-37
Identity = 72/130 (55.38%), Postives = 95/130 (73.08%), Query Frame = -3
Query:  315 RIYMPCIYVINKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLEKIWEYLNLTRIYTKPKGMNPDYEDPVILSSKKRTVEDFCERIHKDMVKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIIKK 704
            R+YMPC+YV NKIDQI++EE++ L + P+   +S  ++ NLD LLE +WEYL LT IYTK +G  PD+ D +IL  K  +VE  C RIH+ +  QFKYALVWG+S K+ PQRVG  H +E EDV+QI+KK
Sbjct:  236 RVYMPCLYVYNKIDQISMEEVDRLARKPNSVVISCGMKLNLDYLLEMLWEYLALTCIYTKKRGQRPDFTDAIIL-RKGASVEHVCHRIHRSLASQFKYALVWGTSTKYSPQRVGLTHTMEHEDVIQIVKK 364          
BLAST of DN618336 vs. ExPASy Swiss-Prot
Match: DRG2_HUMAN (Developmentally-regulated GTP-binding protein 2 OS=Homo sapiens GN=DRG2 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.036e-37
Identity = 72/130 (55.38%), Postives = 95/130 (73.08%), Query Frame = -3
Query:  315 RIYMPCIYVINKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLEKIWEYLNLTRIYTKPKGMNPDYEDPVILSSKKRTVEDFCERIHKDMVKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIIKK 704
            R+YMPC+YV NKIDQI++EE++ L + P+   +S  ++ NLD LLE +WEYL LT IYTK +G  PD+ D +IL  K  +VE  C RIH+ +  QFKYALVWG+S K+ PQRVG  H +E EDV+QI+KK
Sbjct:  236 RVYMPCLYVYNKIDQISMEEVDRLARKPNSVVISCGMKLNLDYLLEMLWEYLALTCIYTKKRGQRPDFTDAIIL-RKGASVEHVCHRIHRSLASQFKYALVWGTSTKYSPQRVGLTHTMEHEDVIQIVKK 364          
The following BLAST results are available for this feature:
BLAST of DN618336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
DRG1_MOUSE4.935e-5166.92Developmentally-regulated GTP-binding protein 1 OS... [more]
DRG1_HUMAN4.935e-5166.92Developmentally-regulated GTP-binding protein 1 OS... [more]
DRG1_BOVIN4.935e-5166.92Developmentally-regulated GTP-binding protein 1 OS... [more]
DRG1_DICDI6.446e-5164.89Developmentally-regulated GTP-binding protein 1 ho... [more]
DRG1_XENLA1.875e-5066.15Developmentally-regulated GTP-binding protein 1 OS... [more]
128UP_DROME4.619e-4963.36GTP-binding protein 128up OS=Drosophila melanogast... [more]
RBG1_YEAST2.298e-4058.46GTP-binding protein RBG1 OS=Saccharomyces cerevisi... [more]
YFY7_SCHPO4.791e-3851.54Uncharacterized GTP-binding protein C9.07c OS=Schi... [more]
DRG2_MOUSE9.036e-3755.38Developmentally-regulated GTP-binding protein 2 OS... [more]
DRG2_HUMAN9.036e-3755.38Developmentally-regulated GTP-binding protein 2 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618336 ID=DN618336; Name=DN618336; organism=Citrus sinensis; type=EST; length=706bp
TTTAAATCTTACACAATCTCTTCTCATGATAGATTAATGACAACGTAAAA
AACACTCTGGAGAGAGGCAAGTCCCAAAATGCACAAAAACTACGATCTTT
GTCGTACAAAAAATTAGCATAGGAGATTTTAACCAGGCAACATAGTGGAT
CACAACCAAAGAGCTTGACCACAAAATAGCTTAATTACACATCAAGCTGT
CTCCTAGGTCTACCTAATCTAATAACAGGCTCTTACTCCTTACGGTGCAT
GAAGTTTAGCAGAACAACTTTGTCGTATAACACCAACAAATTTTAATTCT
TATGAGAATCACACCTTTTTGATAATCTGAACAACATCCTCGTCCTCGAG
CTCATGCTCCTTGCCAACTCTTTGTGGCTTGTGTTTTGCGCTTGACCCCC
ATACCAGAGCATACTTAAATTGTTTAACCATATCTTTGTGAATTCGCTCG
CAGAAATCCTCGACTGTCCTCTTTTTAGATGACAAAATCACAGGGTCTTC
ATAGTCCGGATTCATCCCTTTGGGCTTTGTGTATATACGAGTTAAATTAA
GATATTCCCATATCTTCTCCAGCAAACCATCAAGGTTCCATTCCAGATGC
GCACTAACTGGGCAATAGTGAGGAAGCTTATCCAAAATCTCCAGCTCTTC
AAGAGTAATCTGATCAATTTTGTTTATGACATAGATGCAAGGCATATATA
TCCTAC
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