DN618328

Overview
NameDN618328
Unique NameDN618328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN618328 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.263e-39
Identity = 77/106 (72.64%), Postives = 92/106 (86.79%), Query Frame = -3 
Query:  379 FMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDKSAGIKVV 696
            FMMPHAK MIQQPR+PSSGL+PASDVLIRAKE + NRD LV+LL+KHTGNS E V   +RRPY+MD+ +AKEFGVID++LWRGQE I+A+V P EE+DK+AGIK V
Sbjct:  224 FMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDKNAGIKSV 329
The following BLAST results are available for this feature:
BLAST of DN618328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CLPR3_ARATH3.263e-3972.64ATP-dependent Clp protease proteolytic subunit-rel... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02G16_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618328 ID=DN618328; Name=DN618328; organism=Citrus sinensis; type=EST; length=698bp
GGAAAAGTTAAAACATAAATTATTATAAACTCCAACATGAAATAAAGAAT
TATACAGACTAAAATTAAACAGACATCATTGAATTGACTTCCAATTCTAG
AGAACCTGCTTTTGTTGCATACATATAATTATCAATCATGATAAGAAGGC
TACAACTCCAGACGATATGCAAGCATCACTATCTATAACGTCCCTCTTAG
ACTTGCTTACATTGGGCTGCCATCTTATACGGGCAGTCTATGAATCTCCA
TAAGATGTAATCGTTTGAAGATAAACTAAGCTTCAATAAATCATGGTAGC
TTCTCCGAGATGCCTTCAGATATCAGAACTTCTTCCTGCGATAAGTATCC
AGTGAAGAGATTAAAATCAAAATTTATCTACAACTTTAATCCCAGCACTC
TTATCCCATTCCTCTGGAGGAGCAACTTCCGCCATAATAGTTTCCTGACC
ACGCCAGAGAACCTTGTCGATGACTCCAAATTCCTTGGCTCTTCTAGAGT
CCATATGATATGGTCTTCTAATTGTTTTAGTCACAAACTCCTCTGAATTT
CCAGTGTGCTTGGCCAGAAGTTTTACAAGTGTGTCTCTGTTTACCATTGC
CTCTTTTGCACGAATAAGAACATCACTAGCGGGCAGCAACCCAGATGATG
GAAGACGAGGTTGCTGAATCATGATTTTGGCATGAGGCATCATAAATC
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