FC921946

Overview
NameFC921946
Unique NameFC921946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length216
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13533 contig Csv1_Contig13533:555..770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC921946 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.484e-35
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = -3 
Query:    2 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 214
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPP+RHSIVVNLGDQ+EVITNGK
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGK 228
[Close]
BLAST of FC921946 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.484e-35
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = -3 
Query:    2 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 214
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPP+RHSIVVNLGDQ+EVITNGK
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGK 228
[Close]
BLAST of FC921946 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.317e-35
Identity = 68/71 (95.77%), Postives = 71/71 (100.00%), Query Frame = -3 
Query:    2 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 214
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG+WIDVPP+RHSIVVNLGDQ+EVITNGK
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGK 228
[Close]
BLAST of FC921946 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.256e-34
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = -3 
Query:    2 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 214
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIVVNLGDQ+EVITNGK
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGK 228
[Close]
BLAST of FC921946 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.256e-34
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = -3 
Query:    2 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 214
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIV+NLGDQ+EVITNGK
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGK 228
[Close]
BLAST of FC921946 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 1.256e-34
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = -3 
Query:    2 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 214
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIVVNLGDQ+EVITNGK
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGK 228
[Close]
BLAST of FC921946 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.640e-34
Identity = 66/71 (92.96%), Postives = 70/71 (98.59%), Query Frame = -3 
Query:    2 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 214
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG W+DVPP++HSIVVNLGDQ+EVITNGK
Sbjct:  164 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGK 234
[Close]
BLAST of FC921946 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.142e-34
Identity = 66/71 (92.96%), Postives = 71/71 (100.00%), Query Frame = -3 
Query:    2 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 214
            KVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG+WIDVPP+RHSIVVN+GDQ+EVITNGK
Sbjct:  162 KVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGK 232
[Close]
BLAST of FC921946 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.798e-34
Identity = 66/71 (92.96%), Postives = 70/71 (98.59%), Query Frame = -3 
Query:    2 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 214
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG+W+DVPP+ HSIV+NLGDQIEVITNGK
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGK 228
[Close]
BLAST of FC921946 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.798e-34
Identity = 66/71 (92.96%), Postives = 70/71 (98.59%), Query Frame = -3 
Query:    2 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 214
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG WIDVPP+RH+IVVNLGDQ+EVITNG+
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGR 228
The following BLAST results are available for this feature:
BLAST of FC921946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ACCO3_PETHY1.484e-3597.181-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_PETHY1.484e-3597.181-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO2_SOLLC4.317e-3595.771-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO4_SOLLC1.256e-3495.771-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO4_PETHY1.256e-3494.371-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_SOLLC1.256e-3495.771-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_DIACA1.640e-3492.96Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO1_DORSP2.142e-3492.961-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO2_MALDO2.798e-3492.961-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_CUCME2.798e-3492.961-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]

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Properties
Property NameValue
Genbank descriptionC06054C08T7 RindPdigS Citrus sinensis cDNA clone C06054C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921946 ID=FC921946; Name=FC921946; organism=Citrus sinensis; type=EST; length=216bp
ACTTTCCATTGGTGATCACCTCAATTTGGTCACCGAGGTTGACAACAATG
GAGTGGCGCAATGGGGGCACATCAATCCACTGGCCATCTTTAAGAAGCTG
AAGGCCACTGACTTTGTCATCCTGGAAGAGCAAGATGATGCCGCCGGCGT
CGGTGTGAGCCCGGAGACCCTTGATCAAATCTGGCTTGGGGCATGGTGGG
TAGTTGCTAACTTTGG
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