DN618317

Overview
NameDN618317
Unique NameDN618317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618317 vs. ExPASy Swiss-Prot
Match: CU66_HYACE (Larval/pupal rigid cuticle protein 66 OS=Hyalophora cecropia GN=CP66 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.219e-12
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 1
Query:  160 FAYEVADPISGDFKSQVEKSDGHTVRGTYSLLESDGTKRIVDYGDEGFGFTALVRKEGTPHQPAP 354
            F+Y VADP +GDFKSQ+E   G  V+G YSLLESDGT+R VDY     GF A+VRK+      AP
Sbjct:   23 FSYGVADPSTGDFKSQIESRLGDNVQGQYSLLESDGTQRTVDYAAGSEGFNAVVRKDPALIAAAP 87          
BLAST of DN618317 vs. ExPASy Swiss-Prot
Match: CU19_LOCMI (Cuticle protein 19 OS=Locusta migratoria PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.879e-11
Identity = 40/74 (54.05%), Postives = 44/74 (59.46%), Query Frame = 1
Query:  151 KYEFAYEVADPISGDFKSQVEKSDGHTVRGTYSLLESDGTKRIVDY-GDEGFGFTALVRKEGTPHQPAPVAPVV 369
            KY F Y V DP +GD K Q E+ DG  VRG YSLLE DGT R V Y  D   GF A+V + G    PAP AP V
Sbjct:   58 KYAFEYGVNDPHTGDVKRQWEERDGDVVRGEYSLLEPDGTTRTVTYTADAHNGFNAVVHRSGPSAHPAP-APAV 130          
BLAST of DN618317 vs. ExPASy Swiss-Prot
Match: CU21_LOCMI (Cuticle protein 21 OS=Locusta migratoria GN=ACP21 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 1
Query:  151 KYEFAYEVADPISGDFKSQVEKSDGHTVRGTYSLLESDGTKRIVDY-GDEGFGFTALVRKEGTPHQPAPVAPVV 369
            +Y +AY V D ++GD K+Q E  DG  V+G+YSL+E DG+ R VDY  D   GF A+V KE   H PAPV   V
Sbjct:   67 QYSYAYNVQDALTGDSKAQQETRDGDVVQGSYSLVEPDGSIRTVDYTADPVNGFNAVVHKEAGAH-PAPVVAKV 139          
The following BLAST results are available for this feature:
BLAST of DN618317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CU66_HYACE2.219e-1256.92Larval/pupal rigid cuticle protein 66 OS=Hyalophor... [more]
CU19_LOCMI1.879e-1154.05Cuticle protein 19 OS=Locusta migratoria PE=1 SV=1[more]
CU21_LOCMI7.139e-1150.00Cuticle protein 21 OS=Locusta migratoria GN=ACP21 ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02G11_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618317 ID=DN618317; Name=DN618317; organism=Citrus sinensis; type=EST; length=641bp
GACGGGTTTACTCATTTTTTTCCCGTTACAATCCAATCTCAAGGAATGGC
TGTCAAGTTCATCGCACTAGCTTCCCTCATAACAGTGATAGCCTGCAACC
CTCATTATGCACCAGGGCATGGATACGGTCCTGGCCCAGCAAATTCGGGT
AAATACGAATTTGCTTATGAAGTTGCCGACCCGATATCAGGAGATTTTAA
AAGCCAAGTTGAAAAAAGCGATGGTCACACCGTAAGAGGTACTTACTCAT
TATTGGAATCCGATGGTACAAAACGTATCGTTGATTATGGTGACGAAGGT
TTTGGTTTCACTGCCTTGGTGAGAAAAGAAGGAACTCCTCACCAACCAGC
TCCAGTAGCTCCGGTTGTAAGTGGCGCTCATGGTCCGAGTCCAGGCTATG
GCCCTGGTCATGGTTCAAGCACAGGCGGTCACGGATACGGTCCAAGCTCA
GGATACGGTCCAGGACCAGGCTATGGACCTAGTCCAGGATATGGCTCAAG
CGGAAGTCACGGTTCAAGTTCCGTTCACGGTCCAAATCCAGGCTACGGTC
CAAATCCAGGCTACGGTCCACATCCAGGCTACGGTCCAAATCCAGGTTAC
GGTCCAAATCCAGGTTACAGTCCGAGCCCTCCCGTATATAG
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