DN618316

Overview
NameDN618316
Unique NameDN618316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618316 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.827e-44
Identity = 87/140 (62.14%), Postives = 97/140 (69.29%), Query Frame = 2
Query:  197 LRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKK 607
            L LPPGFRFHPTDEELVV YL RK+   PLP  II EVD+ K DPWDLP       +E YFF+ R+ KYPNG+R NRA G GYWKATG DK +A     + VG+KK LVFY GK P G +TDWIMHEYRL  A  AP  K
Sbjct:   19 LNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGK 158          
BLAST of DN618316 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.099e-42
Identity = 85/139 (61.15%), Postives = 97/139 (69.78%), Query Frame = 2
Query:  203 LPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDV---AQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKN 610
            LPPGFRFHPTDEEL+V YL+ +  + P P SIIPEVD+ K DPW LP        E YFFS RE KYPNG R NRA  SGYWKATG DK I +   N  VG+KK LVFY+G+PP G +TDWIMHEYRL  +  A  K+N
Sbjct:    9 LPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSN--VGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRN 145          
BLAST of DN618316 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.176e-42
Identity = 82/130 (63.08%), Postives = 98/130 (75.38%), Query Frame = 2
Query:  203 LPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATS--RGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 577
            LPPGFRFHPTDEELV+ YLKRK  + PLP +II +VD+ K DPW+LP   +   QE YFFS R+ KYPNG R NRA  SGYWKATG DK + ++   G++ VG+KK LVFY GKPP G ++DWIMHEYRL
Sbjct:   17 LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRL 146          
BLAST of DN618316 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.105e-40
Identity = 80/132 (60.61%), Postives = 94/132 (71.21%), Query Frame = 2
Query:  191 GVLRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDV---AQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 577
            G L+LPPGFRFHPTD+ELV+ YL RK    PL A +I EVD+ K +PWDLP       +E YFFS R+ KYPNG R NRA G+GYWKATG DK + + R    V +KK LVFY GKPP G +T+WIMHEYRL
Sbjct:    5 GALQLPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSPRA---VAIKKALVFYAGKPPKGVKTNWIMHEYRL 133          
BLAST of DN618316 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.940e-39
Identity = 79/141 (56.03%), Postives = 96/141 (68.09%), Query Frame = 2
Query:  197 LRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDV---AQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKN 610
            L+LPPGFRFHPTDEELV+ YL R+    P+   II E+D+ K DPW LP       +E YFFS R+ KYPNG+R NRA GSGYWKATG DK + + +    V +KK LVFY GK P G +T+WIMHEYRL     + +KKN
Sbjct:    7 LQLPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKP---VAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKN 144          
BLAST of DN618316 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 2.533e-39
Identity = 80/141 (56.74%), Postives = 98/141 (69.50%), Query Frame = 2
Query:  194 VLRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDV---AQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKK 607
            +L+LPPGFRFHPTDEELV+ YL RK  +  +   II E+D+ K DPW+LPG      +E YFFS R+ KYPNG+R NR+ GSGYWKATG DK I   +    VG+KK LVFY GK P G +T+WIMHEYRL     + +KK
Sbjct:    4 LLQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKP---VGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKK 141          
BLAST of DN618316 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.145e-38
Identity = 78/131 (59.54%), Postives = 95/131 (72.52%), Query Frame = 2
Query:  197 LRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDV---AQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLV 580
            L LPPGFRF+PTDEEL+VQYL RK+        +I ++D+ K DPWDLP       +E YFFS R+ KYPNG+R NR  GSGYWKATG DK I T+ G + VG+KK LVFY GK P G++T+WIMHEYRL+
Sbjct:   12 LSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK-IITADGRR-VGIKKALVFYAGKAPKGTKTNWIMHEYRLI 140          
BLAST of DN618316 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.240e-38
Identity = 80/141 (56.74%), Postives = 96/141 (68.09%), Query Frame = 2
Query:  197 LRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDV---AQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKN 610
            L LPPGFRF+PTDEEL+VQYL RK         +I E+D+ K DPW LP       +E YFFS R+ KYPNG+R NR  GSGYWKATG DK I+T    Q VG+KK LVFY GK P G++T+WIMHEYRL+     P ++N
Sbjct:   12 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE--GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLI----EPSRRN 146          
BLAST of DN618316 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.150e-38
Identity = 73/128 (57.03%), Postives = 93/128 (72.66%), Query Frame = 2
Query:  203 LPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 577
            LPPGFRFHPTDEEL+  YL RK+      +  I EVD+ K +PW LPG      +E YFFS R+ KYP G R+NRAT +GYWKATG D++I +S+   +VGMKKTLVFY+G+ P G +++W+MHEYRL
Sbjct:   17 LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRL 144          
BLAST of DN618316 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.064e-37
Identity = 74/128 (57.81%), Postives = 92/128 (71.88%), Query Frame = 2
Query:  203 LPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 577
            LPPGFRFHPTDEEL+  YL  KIF   L    I EVD+ + +PW+LP       +E YF+S R+ KYP G R+NRAT +GYWKATG DK++ +  G Q+VGMKKTLVFY+G+ P G +T W+MHEYRL
Sbjct:   22 LPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRL 149          
The following BLAST results are available for this feature:
BLAST of DN618316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC68_ORYSJ5.827e-4462.14NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC29_ARATH1.099e-4261.15NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC18_ARATH4.176e-4263.08NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC71_ORYSJ5.105e-4060.61NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC48_ORYSJ1.940e-3956.03NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC2_ARATH2.533e-3956.74NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC72_ARATH2.145e-3859.54NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC19_ARATH6.240e-3856.74NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC98_ARATH8.150e-3857.03Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC31_ARATH1.064e-3757.81Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618316 ID=DN618316; Name=DN618316; organism=Citrus sinensis; type=EST; length=613bp
TTCCAGCCCCCTCTCTCAATTTACCCAGCCGAGGCCAACCCGTTCCCGTT
CTTTTCATGTTCCTCAGTCTTTCACTAAATTTGATGGGTTTTTAACAAAG
TTTGCTCTGAGCTGAGTTTTGGGCTTTGCAAAGACTTTTCGGTTACAGTG
AAGATTAAGATTAATGGAGAAGATCAATTTTATGAAGAATGGTGTGCTGA
GACTGCCTCCGGGATTCCGGTTTCATCCTACGGACGAAGAACTTGTTGTT
CAGTACTTGAAGCGCAAGATTTTTGCCTGCCCCTTGCCCGCTTCCATAAT
TCCAGAAGTTGATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGATG
TGGCGCAAGAGAGGTATTTTTTCAGCACAAGGGAAGCTAAGTACCCAAAC
GGGAACAGATCGAACAGGGCCACGGGGTCTGGTTATTGGAAGGCAACTGG
GCTTGACAAGCAAATTGCGACTTCCAGGGGCAACCAAATCGTGGGAATGA
AAAAAACTCTCGTTTTTTATAGAGGCAAGCCACCACACGGCTCTAGGACT
GATTGGATCATGCATGAATACCGCCTTGTTACTGCTGCCAATGCCCCTCA
AAAGAAAAACTTT
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