DN618306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618306 vs. ExPASy Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.391e-50 Identity = 101/153 (66.01%), Postives = 121/153 (79.08%), Query Frame = -1 Query: 149 KAGATPARVV--GSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXAIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 601 KAGA+ + V G++ K +A+ V +L++KA+LKDVG A+EVLLGGDDGSLAF+P +FSVS+GEKI FKNNAGFPHNVVFDEDEIP+GVD SKISMS EDLLN GETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN Sbjct: 18 KAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATAVSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170
BLAST of DN618306 vs. ExPASy Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 6.904e-50 Identity = 100/147 (68.03%), Postives = 115/147 (78.23%), Query Frame = -1 Query: 149 TPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXAIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 589 T A+++ +T +AVP+LS+KA+LK+VG A+EVLLGG DGSLAF+P FSV+SGE+IVFKNNAGFPHNVVFDEDEIPSGVD +KISMS EDLLN PGETY VTLTEKGTY FYCSPHQGAGMVG+VTVN Sbjct: 27 TTAKIIPTT-----TAVPRLSVKASLKNVGAAVVATAAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168
BLAST of DN618306 vs. ExPASy Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 9.016e-50 Identity = 100/151 (66.23%), Postives = 113/151 (74.83%), Query Frame = -1 Query: 149 KAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXAIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 601 KAG+ V ++ K SAS +P+LSIKA++KDVG AI+VLLG DDGSLAFVPS FS+S GEKIVFKNNAGFPHN+VFDED IPSGVD SKISMS EDLLN GET+ V L+ KG YSFYCSPHQGAGMVG+VTVN Sbjct: 18 KAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAASAMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168
BLAST of DN618306 vs. ExPASy Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.102e-47 Identity = 96/151 (63.58%), Postives = 113/151 (74.83%), Query Frame = -1 Query: 149 KAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXAIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 601 KA + V ++ K SAS +P+LSIKA+LK+VG A++VLLG DDGSLAFVPS FSV +GEKIVFKNNAGFPHNV+FDED +PSGVDVSKISMS EDLLN GET+ V L++KG Y+FYCSPHQGAGMVG+V VN Sbjct: 18 KAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAASAMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVDVSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168
BLAST of DN618306 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.219e-46 Identity = 95/148 (64.19%), Postives = 112/148 (75.68%), Query Frame = -1 Query: 149 STMKASAS--------AVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXAIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 568 ST+K+SA+ A PKL++K++LK+ G AIEVLLGG DGSLAF+P+ FS++ GEKIVFKNNAG+PHNVVFDEDEIPSGVDV+KISM +DLLNG GETY V LTE GTYSFYC+PHQGAGMVG+VTVN Sbjct: 20 STIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASIALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDVAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167
BLAST of DN618306 vs. ExPASy Swiss-Prot
Match: PLAS_SILPR (Plastocyanin, chloroplastic OS=Silene pratensis GN=PETE PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.048e-46 Identity = 91/134 (67.91%), Postives = 102/134 (76.12%), Query Frame = -1 Query: 149 ASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXAIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 550 A A P++SIKA+LKDVG A EVLLG DG LAFVPS S++SGEKI FKNNAGFPHNVVFDEDE+P+GVDV+KISM EDLLN PGE Y+VTLTEKGTY FYC+PH GAGMVG+VTVN Sbjct: 32 AVATPRMSIKASLKDVGVVVAATAAAGILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165
BLAST of DN618306 vs. ExPASy Swiss-Prot
Match: PLAS2_TOBAC (Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 3.920e-45 Identity = 85/99 (85.86%), Postives = 93/99 (93.94%), Query Frame = -1 Query: 149 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 445 IEVLLG DDG LAFVP +FSVS+GEKI FKNNAGFPHNVVFDEDEIP+GVD SKISMS EDLLNGPGETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN Sbjct: 1 IEVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNGPGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99
BLAST of DN618306 vs. ExPASy Swiss-Prot
Match: PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum GN=PETE PE=4 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.687e-45 Identity = 91/135 (67.41%), Postives = 99/135 (73.33%), Query Frame = -1 Query: 149 SASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXAIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 553 S S P+L ++A+LKD G A+EVLLG DG LAFVPSS VS+GE IVFKNNAGFPHNVVFDEDEIP+GVD SKISM EDLLN PGETY+V L KGTY FYCSPHQGAGMVGQVTVN Sbjct: 34 STSQSPRLCVRASLKDFGVALVATAASAVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 168
BLAST of DN618306 vs. ExPASy Swiss-Prot
Match: PLAS_RUMOB (Plastocyanin OS=Rumex obtusifolius GN=PETE PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.141e-44 Identity = 83/98 (84.69%), Postives = 93/98 (94.90%), Query Frame = -1 Query: 152 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 445 IE+ LGGDDG+LAFVP SF+V++GEKIVFKNNAGFPHN+VFDEDE+P+GVD SKISMS EDLLN PGETYAVTL+EKGTYSFYCSPHQGAGMVG+VTV Sbjct: 1 IEIKLGGDDGALAFVPGSFTVAAGEKIVFKNNAGFPHNIVFDEDEVPAGVDASKISMSEEDLLNAPGETYAVTLSEKGTYSFYCSPHQGAGMVGKVTV 98
BLAST of DN618306 vs. ExPASy Swiss-Prot
Match: PLAS1_TOBAC (Plastocyanin A'/A'' OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.490e-44 Identity = 84/99 (84.85%), Postives = 93/99 (93.94%), Query Frame = -1 Query: 149 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 445 IEVLLG DDG LAFVP +FSVS+GEKI FKNNAGFPHNVVFDEDEIP+GVDVSKISMS E+ LNGPGETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN Sbjct: 1 IEVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDVSKISMSEEEYLNGPGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99 The following BLAST results are available for this feature:
BLAST of DN618306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618306 ID=DN618306; Name=DN618306; organism=Citrus sinensis; type=EST; length=601bpback to top |