DN618291

Overview
NameDN618291
Unique NameDN618291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length498
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN618291 vs. ExPASy Swiss-Prot
Match: RIO1_DICDI (Serine/threonine-protein kinase rio1 OS=Dictyostelium discoideum GN=rio1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.901e-18
Identity = 46/127 (36.22%), Postives = 83/127 (65.35%), Query Frame = -3 
Query:  116 FKKHGVAVMTIRELFDFVVDPTIADDSVDSYLEEVQQKILARGDMSAEDEIADSVFVQSYIPKTLEQVKNAEEDVIRITSGKDTGDMYYKTITGLKETLSKPSPARKELQLDANAAEESSVDLADNS 496
            F+K  V  M I+ELF+F+ D TI +D++D YLE++ +KI +RG+ + E +I + VF  +YIP+TL+Q+ + + D+ +I  G+   D++Y+ +TGL + L     ++ +L  D+N  ++S    +D+S
Sbjct:  371 FRKKEVNTMFIQELFEFITDLTITEDNIDQYLEKMLEKIQSRGETTDEQKIQEEVFRNAYIPRTLDQIIDLDRDMEKIERGEGR-DIFYQNLTGLSKDLQN-IKSKNDLINDSNENKDSDDSSSDSS 495
[Close]
BLAST of DN618291 vs. ExPASy Swiss-Prot
Match: RIOK1_MOUSE (Serine/threonine-protein kinase RIO1 OS=Mus musculus GN=Riok1 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 4.995e-17
Identity = 47/110 (42.73%), Postives = 70/110 (63.64%), Query Frame = -3 
Query:  197 FKKHGVAVMTIRELFDFVVDPTIADDSVDSYLEEVQQKILAR--GDMSAEDEIADSVFVQSYIPKTLEQVKNAEEDVIRITSGKD--------TGDMYYKTITGLKETLS 496
            F KH VAVMT+RELFDFV DP+I  D++D+YLE+  +    R   + +++D + + VF Q+YIP+TL +VKN E DV  +   K+          ++ Y+T+ GLK+ LS
Sbjct:  367 FSKHAVAVMTVRELFDFVTDPSITADNMDAYLEKAMEIASQRTKEEKTSQDHVDEEVFKQAYIPRTLNEVKNYERDVDIMMRLKEEDMALNTQQDNILYQTVMGLKKDLS 476
[Close]
BLAST of DN618291 vs. ExPASy Swiss-Prot
Match: RIOK1_HUMAN (Serine/threonine-protein kinase RIO1 OS=Homo sapiens GN=RIOK1 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.113e-16
Identity = 49/131 (37.40%), Postives = 79/131 (60.31%), Query Frame = -3 
Query:  140 FKKHGVAVMTIRELFDFVVDPTIADDSVDSYLEEVQQKILAR--GDMSAEDEIADSVFVQSYIPKTLEQVKNAEEDVIRITSGKD--------TGDMYYKTITGLKETLS--KPSPARKELQLDANAAEES 496
            F +H VAVMT+RELF+FV DP+I  +++D+YL +  +    R   + S++D + + VF ++YIP+TL +VKN E D+  I   K+          ++ Y+T+TGLK+ LS  +  PA  E Q++     +S
Sbjct:  368 FMRHSVAVMTVRELFEFVTDPSITHENMDAYLSKAMEIASQRTKEERSSQDHVDEEVFKRAYIPRTLNEVKNYERDMDIIMKLKEEDMAMNAQQDNILYQTVTGLKKDLSGVQKVPALLENQVEERTCSDS 498
The following BLAST results are available for this feature:
BLAST of DN618291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
RIO1_DICDI5.901e-1836.22Serine/threonine-protein kinase rio1 OS=Dictyostel... [more]
RIOK1_MOUSE4.995e-1742.73Serine/threonine-protein kinase RIO1 OS=Mus muscul... [more]
RIOK1_HUMAN1.113e-1637.40Serine/threonine-protein kinase RIO1 OS=Homo sapie... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02F22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002F22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618291 ID=DN618291; Name=DN618291; organism=Citrus sinensis; type=EST; length=498bp
TTTTTTTTTTTTTTTTTCTTGCAGTTTTCTTGTCAATAGGTACCTTTGTA
TCAGTTTCAGGTGAAGAATCCTTTTCTTCATCTGTTTCAGATTCTGATTC
AGTCTCTGAGTAATTAGAATTGTCAGCTAGGTCAACAGATGACTCCTCTG
CAGCATTTGCATCCAGTTGCAGCTCCTTTCTTGCCGGAGAAGGTTTGGAC
AGAGTCTCCTTTAGCCCAGTAATTGTCTTGTAGTACATGTCTCCAGTATC
CTTGCCACTTGTTATTCGTATTACATCCTCCTCAGCATTTTTTACTTGCT
CTAGGGTCTTCGGGATATATGACTGCACGAATACAGAGTCTGCTATTTCA
TCTTCCGCGGACATATCTCCTCTTGCCAAAATTTTTTGTTGAACCTCTTC
CAAATAACTGTCCACAGAATCATCAGCAATAGTTGGATCAACTACGAAGT
CAAATAGTTCCCGGATTGTCATAACCGCCACACCATGTTTCTTAAAAA
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